Oncorhynchus gorbuscha (pink salmon): 124037156
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Entry
124037156 CDS
T07892
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124037156
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
124037156
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124037156
Enzymes [BR:
ogo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
124037156
Amino acid related enzymes [BR:
ogo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124037156
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124037156
Prokaryotic type
124037156
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
GRXCR1-2_C
Motif
Other DBs
NCBI-GeneID:
124037156
NCBI-ProteinID:
XP_046207776
LinkDB
All DBs
Position
LG06:47915369..47917895
Genome browser
AA seq
482 aa
AA seq
DB search
MEVLMHHLWQRVLPHLPRAMSTPCKSDLSCAAGHAPTDSISRPSTHLPLVSHLFQPSNLR
DVGQEKRAQVDMTCKSQRLMQQAGLIHPSNPGCYYYLPATVRSMEKLVRLIDQEMQGIGG
QKLDMPSLCSAELWRLSERWDLMGKELFRLRDRHGAEYCLGPTHEEAVTELLASQGTLSY
RQLPLLLYQITRKFRDEPKPRFGLLRGREFYMKDMYTFDMSEEAAYHTYESVCQAYTRLF
SRLGLCIVQVHADTGNIGGKLSHEFQLPADIGEDRLLVCGSCSFSANVETMEPGRTDCPQ
CQEGTLVESKGIEVGHTFYLGTKYSHIFNATFNNTQNKPAVTEMGCFGLGVTRILAAAIE
VMSTEEAIRWPGLLAPYQVCVLPPKKGSKVDEVAGLAEELALSLGEALPRLRGEVVLDDR
TQMTIGKRLKDASRLGYPYVVVVGQKAAEETPRFEVICQQTGETMFLSRDGLVDLLRCVE
TV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgttgatgcatcacctttggcagagagtcttgccccacctacccagagccatg
agcactccctgtaaaagcgatttgagctgtgctgctggacatgcccccactgactccatc
tcccgacctagcacacaccttcccctagtctcccatctcttccagccctccaacctgcgt
gatgtgggccaggagaagcgtgctcaggtggatatgacctgcaagagccagagactgatg
cagcaggcaggtctcattcacccctccaaccctggctgctactactacctcccggccact
gtgcgctccatggagaagctggtgaggctgatcgaccaggagatgcaggggatcggtggg
cagaagctggacatgcccagcctgtgttcggcagagctgtggagactcagtgaacgctgg
gacctgatggggaaagagctgttccgcctgagggaccgccacggggcggaatactgcctg
ggccccacccatgaggaggctgtgacagaactactggcctctcagggaaccctgtcctac
aggcagctgcctctgctactctaccagatcacccgcaagttccgtgatgagccgaagcct
cggtttgggcttctacgcgggcgggagttctacatgaaggacatgtacacatttgacatg
agcgaagaagctgcataccacacatatgaatctgtgtgccaggcttacacccgccttttc
tctcggttaggcctgtgcattgtccaggtccacgctgatacaggaaacattggaggtaaa
ctctcccatgagtttcagctccccgcagacatcggagaggacaggctactggtctgtggt
agctgctccttctctgccaatgtggagaccatggaaccaggccggacagactgcccacag
tgccaggagggaacgctggtggagtctaagggcatagaggtaggccatacgttctaccta
ggcaccaagtactcccacatattcaacgccaccttcaacaacacccagaacaagcctgct
gtcactgagatgggctgcttcgggctgggtgtgacccggatcctcgctgctgccatcgag
gtgatgtccacggaggaggcaatccgctggcctgggctgcttgccccctatcaggtctgt
gttctgccccctaaaaagggcagtaaggtggatgaggtggctggtttagctgaggagctg
gccctcagtctgggggaggctctgcctaggctaagaggtgaggtggttctggatgaccgg
acacagatgaccattggtaagaggctgaaggacgccagtcggcttggatacccgtacgtg
gtggtagtgggacagaaggctgccgaggagacgcccaggtttgaggtgatctgtcagcag
actggtgagacaatgttcctcagtagagatggacttgtagacctactcagatgtgtggag
acagtctga
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