Oncorhynchus gorbuscha (pink salmon): 124037184
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Entry
124037184 CDS
T07892
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124037184
03036 Chromosome and associated proteins [BR:
ogo03036
]
124037184
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124037184
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124037184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
124037184
NCBI-ProteinID:
XP_046207813
LinkDB
All DBs
Position
LG01:38229532..38245822
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AA seq
802 aa
AA seq
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MKYSFLEQLLPMDGGPTDVVVEAKDFTYEGEEVVADLLQQAAEGVMDQQPEGVAGLDTQQ
LVEGVNVEMMVMDSLDPALLQLKTEVMDAPVATAHEATVTTVDETQIITLQVVNMDEQQL
GGLGELQLVQVPVSAVPVTQATVEALQGTFVDTTAMPKDGNPVICHTLPLPEGFQVVKVG
ANGEVETVEQDELQHQEAQQVQPEEEEEELHCEPQPEEPQWAKDPDYQPPAKKTIKKAKK
STLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQ
CELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDC
DMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYA
SRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA
RKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQE
RHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKAFTRR
NTMARHAENCNGDPSEGENGSPPKRGRGGRKRKMRSRKDEDDDDDDDDSEDNADPELDDI
DEEDEEAEAALLEEEEEEEEMMELEQAPPTKPIPAPVEPPVKRKRGRPPKNIPKPSPPAK
ASKAAPKGKAASAAAVIQVEDENTGAIENIIVKKEQEAEQAAPEVVVEQPEEAGVETVEL
PVADAAPNGDLTPEMILSMMDR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctagagcagttattaccgatggacggaggaccaacggatgttgtg
gttgaggccaaggacttcacctatgagggggaggaggtggtggcagacctgctccagcaa
gcagcagaaggggtgatggaccagcagccagagggagttgctggtctggatacccagcag
ctggtggagggagtcaatgtggagatgatggtaatggactccctggacccggccctgctg
cagttgaagactgaggtgatggacgcccctgtggctacagcccacgaggccacggtcacc
acggtggatgagacccagatcatcactctgcaggttgtcaacatggatgagcagcagctg
ggaggcctcggggagctacagctggtccaggtccctgtctctgctgtccctgtcacccag
gctactgtagaggcgctacagggtaccttcgtggacaccacggccatgcccaaagacggg
aaccctgttatctgccacaccctgcccctgccagagggattccaggtggtgaaggtgggt
gcgaatggtgaggttgaaacagtggagcaggatgagctccagcaccaagaggcacagcag
gtccagcctgaggaggaggaggaggagctgcactgtgagccccagcctgaagaaccacaa
tgggccaaggaccccgactaccagcccccagccaagaagaccatcaagaaggcaaaaaag
agcacgctgcgctacaacacagagggggataaagacaacatggacgtgtctgtgtatgat
tttgaggaggagcagcaggaagggatgctctcggaggtcaacgcagagaaggtggtgggc
aacatgaaaccccccaaacccaccaaaattaagaaaaagggtgtgaagaaaacattccag
tgtgagctgtgtagctacacctgtccccgccgctccaacttggaccgacacatgaaaagc
cacacagatgagaggccccacaagtgccatctgtgtggaagggccttcaggactgttacc
ctgctaaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagattgt
gacatggccttcgtgaccagtggagagttggtccgacatcgtcgctacaagcacactcat
gagaaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagctaaag
cggcacatccgttcccacactggggagcgtcctttccagtgcagtctgtgcagctacgcc
agcagagacacctacaagctgaagagacacatgaggacacactctggagagaagccgtat
gagtgctatatttgccacgcccgtttcacccagagtggaaccatgaagatgcacatcctg
cagaagcacacagagaacgtggctaagttccactgcccccactgtgacacagtcatcgcc
cgaaagagtgacctgggcgtccacctgcgaaaacagcactcattcattgagcagggcagg
aaatgtcgttactgtgatgctgtgttccacgagcgctacgcactcatccagcaccagaag
tcccacaagaatgagaaacgcttcaagtgtgaccagtgtgattactgctgcagacaggag
cgccacatgctgatgcacaggcgcacccacacaggagagaagccttacgcctgtagccag
tgtgagaagaccttccgtcagaagcagctcctggacatgcatttccggcgttaccatgac
cccaactttgtgcccaccgcctttgtgtgcaccaagtgtggcaaggcctttacccgcagg
aacacaatggccagacatgcagagaactgtaacggggatcctagtgaaggagagaacgga
tccccacccaagagaggacgaggcgggaggaagaggaagatgcgctcaaggaaggatgaa
gacgatgatgatgacgatgacgacagtgaggacaatgctgatcctgagctggatgacatt
gatgaagaggatgaggaggctgaggcagcactgctggaggaagaggaggaggaggaggag
atgatggagttggagcaggctccacccaccaaacctattcctgcccctgtagagccacct
gtcaagaggaaacgcggcagacctcccaagaacatccccaaaccctcccctcccgccaaa
gccagcaaggctgcccccaaaggcaaggctgcttcagctgcagccgtcatccaggtggag
gatgagaataccggcgccatagagaacatcatagtgaagaaggagcaagaggctgaacag
gctgccccagaggtggtggtggagcaaccagaggaggcaggggtggagacggtggagctg
cctgtagcagacgctgcccccaacggagacctcacccctgagatgatcctcagcatgatg
gaccggtga
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