Oncorhynchus gorbuscha (pink salmon): 124037362
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Entry
124037362 CDS
T07892
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124037362 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124037362 (nup93)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124037362 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
124037362
NCBI-ProteinID:
XP_046208025
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Position
LG01:38847090..38888763
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AA seq
844 aa
AA seq
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MSFWKTRHHPITVDLRSAGVKLVAMEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEI
QQAGERLRSRTLTRTSQDAADVKASILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDT
DIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDAL
DFSQDIEPSFVSDAGVPGRSALDSVEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSL
DDKNVSDMWLMVKQMTDVLLVPAKDTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAM
QVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIG
KCDIADNHGEVADKTEDYLWLKLNQVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSA
SQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQ
EAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVI
ESREFDMLLGRLEKDGSRKPGVIDKFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNP
DKVLELMNRLLSPVIAQVSAAQSNKERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDL
MTFFDEYHAGNIDRAYDVMERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNI
LFTQCKRLKGAAAGTPGRPQRSIEDRDSQLRSQARALITFAGIIPYRMAGDTNARLVQME
VLMN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttggaaaacgagacatcatccaatcaccgtagacctcagaagtgccggggta
aaattggttgccatggaagcggagggctttggagaactcctgcagcaggcagagcagctt
gcagcagagactgaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatc
cagcaggctggagagaggctacgctcccgcaccttaactcgaacatcacaagacgcagct
gacgtgaaagcgtccatcctccttgggtccagaggcctggacatcttccacatctcccag
cgtctggagagcctgagtgctgccaccacctttgaacctctagagccagtgaaggacact
gacatccagggctttctgaagaatgagagggacaatgcgctgctctctgccatcgaggag
tcacgtcgcaggacgttcctcttggcagaggagtaccaccgcgagtccatgctggttcag
tgggagcaggtgaagcagagagtattgcacaccctgttgggagcaggggaagatgctctg
gacttcagccaagacatagagcccagctttgtgagtgacgcaggagttcctggacggagt
gctcttgacagcgtggaggtggcctatggacgacagatctacgtttttaatgagaagata
gtgaatggacatgtccagcccaacctgggagacctctgtgcctcagtggcagacagcctg
gatgacaagaatgtgtcggacatgtggttaatggtgaagcagatgacagacgtgctgctg
gtcccagccaaagacacgctgaagagccgcacggccttggacatgcagatggctttcgtc
acgcaggccctgcagttcctgcagaacagctataagaactacaccatggtgacggtgttt
gggaacctgcaccaggcccagctcggaggagtccctggcacctatcagctggtgcgcagc
ttcctcaacatcaaactgccagggcctctgccaggcatgcaggatggtgaggtggagggt
cacccagtctgggctctgatctactactgcctgcgctgtggggacctgggcgctgccatg
caggtggtgaaccgggctcagcaccagctgggggacttcaagacctggttccaggagtac
atgaacagccctgacagacgcctggcccccgccacagagaacaagctgcgtctccactac
cgcagagtgctgaggaactgtgctgacccctacaagagggctgtctactgcctcatcggg
aagtgtgacatcgcagacaaccatggagaggtggccgacaagaccgaggactacctgtgg
cttaagctcaaccaggtgtgcttcgatgacgacggcagcagtgctcctcaggatagactg
acattggcccagctacagaaacagcttctagaggactacggagagtcccacttctcagcc
agccaacagccgttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgct
gtggccttcctgttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggtt
ctctacgagctacggctgctgctcaagtcatcagggcagagcgcacaactgttgagtcag
gaagctggggacccccctatggtgcgtcggctcaacttcatccggctactcatgctctac
acgcgcaagtttgagtccacagacccccgggaggctctacagtacttctacttcctacgg
aatgaaaagaacaaccaaggagagaacatgttcatgtgctgtgttagtgagctggtgatt
gagagtcgagagtttgacatgcttctaggaagactggaaaaagatggcagcagaaagcct
ggagtgattgataaatttgccggagacactcgagccattatcacaaaagtggcgctggag
gctgagaacaagggcctgtttgaggaagcagtaagactgtatgagctggccaagaatcca
gacaaggtcttagagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgct
gcccagtccaacaaggagagactgaagaacactgctgttgccatcgctgagcggtaccgg
acccagggtgttgctggtgagaagtctgcagacagcaccttctacctgctgctggacctc
atgaccttctttgatgagtaccatgctggaaacatagaccgggcctacgatgtgatggag
agactgaagctggtccctctgagtcaagacagtgtggaggaaagggttgctgcatttcgc
aatttcagtgatgaggtcaggcataatctgtcggaggtactcctggccaccatgaatatc
ctgttcacgcagtgcaagcgcctgaagggggccgcagcaggaaccccaggtcgaccacag
aggtccatcgaggacagagactcgcagctgcgcagccaagcccgtgcactgatcacgttt
gctgggattatcccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggag
gtcctgatgaactga
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