Oncorhynchus gorbuscha (pink salmon): 124037433
Help
Entry
124037433 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase arih1-like
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124037433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124037433
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124037433
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124037433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_14
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
124037433
NCBI-ProteinID:
XP_046208087
LinkDB
All DBs
Position
LG06:2452305..2481616
Genome browser
AA seq
527 aa
AA seq
DB search
MDSDEGYNYDFDEDECSEDSGAEEPGGDTLELGEDEVELVDPAEAGGERDEGLETGGSGH
GTGQEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDREKLMERYF
DGNVDKLFSECHVINPCKKSRTRLMSTRSAAQDLPCQICYLNYPNSYFTGLECGHKFCLQ
CWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECN
RLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDD
SETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCN
RYNEDDAKAARDAQERSRAMLQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKMEEMQQHNM
SWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENCTETLSGYLE
RDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDQWEYIED
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaaggttataactatgacttcgacgaggacgaatgtagcgaagacagc
ggcgcagaggaaccggggggagacaccctggagttaggcgaggacgaggtggaactggtc
gatcccgcggaggccggaggggaacgggacgaaggtttggagaccgggggaagtggtcat
gggaccgggcaagaggaagaggactaccgcttcgaagtgctgactgccgagcagatactc
cagcatatggtggagtgtatcagggaggtcaacgaggtcatccagaatcctgcaacaatc
accaggatccttctgagtcacttcaactgggacagagagaagctcatggaaaggtatttc
gacggtaatgtggataagctgttctcagagtgccacgtcatcaacccctgtaagaagtcg
aggaccagactgatgagcacaagatcagctgctcaggacctgccgtgtcagatctgctat
ctaaactacccaaactcatatttcactggcttagagtgtggacacaagttctgtctgcag
tgctggggagattacctgacaaccaaaatcatcgaggaggggatgggacagaccatctcc
tgccctgcccatagttgtgacatcttagtggacgacaacacagtcatgcgcctcataaca
gactctaaagtgaagctgaagtaccaacatttaattaccaatagttttgtagagtgtaat
agactgttaaagtggtgtcccgcaccagactgccatcacgtcgttaaagtccagtacccc
gacgccaagccggtcaggtgcaagtgtggtcgacagttctgcttcaactgtggggagaac
tggcacgatcctgtcaagtgtaagtggctgagaaagtggattaaaaagtgtgacgatgac
agtgaaacatccaactggattgcagctaataccaaggagtgtccaaagtgtcacgtgacc
attgagaaggacggcggctgcaatcacatggtgtgtcggaatcagagctgtaaagctgag
ttctgttgggtctgtctgggtccctgggagccacacggctcagcatggtacaactgcaac
cgctacaatgaagacgatgccaaggcagccagagatgcacaggagcgctccagagcaatg
ttacagcggtacctgttctactgcaaccgttacatgaaccacatgcagtcgctgcgcttc
gagcacaagctgtacgccggggtcaaggccaagatggaggagatgcagcagcacaacatg
tcctggatcgaggtgcagttcctgaagaaggcagtggacgtgctgtgtcagtgtcgctcc
actctcatgttcacctacgtcttcgccttctacctgaagaagaacaaccagtccatcatc
tttgagaacaaccaggcggacctggagaactgcacagagacgttgtcaggatatctggag
agggacatctcccaggattccttgcaggacatcaagcaaaaagtacaagataaatacaga
tattgtgagagccggcggagggtgctgctacaacacgttcacgaaggctatgaaaaggac
caatgggagtacatagaggattaa
DBGET
integrated database retrieval system
