Oncorhynchus gorbuscha (pink salmon): 124037487
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Entry
124037487 CDS
T07892
Name
(RefSeq) unconventional myosin-Vc-like isoform X1
KO
K10357
myosin V
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124037487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124037487
04131 Membrane trafficking [BR:
ogo04131
]
124037487
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124037487
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124037487
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124037487
mRNA cycle factors
P-body specific factors
124037487
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Myosins
124037487
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124037487
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124037487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
NPHP3_N
Sigma54_activat
TsaE
Motif
Other DBs
NCBI-GeneID:
124037487
NCBI-ProteinID:
XP_046208191
LinkDB
All DBs
Position
LG06:complement(8349362..8401159)
Genome browser
AA seq
1164 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILRDFKPGDEALELQLDDGTEMVYPLDKSSPQLP
DLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESNIIYSYCGIILVAVNPYKQLHIYG
DAVIQAYSGQNMGAMDPHIFAVAEEAYKQMDKNNKNQSVIVSGESGAGKTVSARYVMRYF
AMVSKSSSRTHVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMR
TYLMEKSRVVSQSQNERNYHIFYQMCACAEQSEFKSLRLLSADEFRYTCMGGETSIEGVD
DRKDMEETRRTFSLLGLTEDFQSDVFKVLAGILHLGNVEIRNVGSDRSSVSSSDQHLAAF
CDLLGVSPDSVTRWLCHRRIAMVAETVVKAVPSERAVNSRDALAKQIYAHLFDCVIQKIN
AALQVPGKQHSFIGVLDIYGFETFDINSFEQFCINFANEKLQQQFNLHVFKLEQDEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLNEECLFPQGTDQNWLQKLYNYLADNPLFEKP
RMSNKAFIIQHFADKVEYQCRGFLEKNRDALYEELVDTMATSKFPLLANFFLEVEPDGLG
TKGIKVRPAQPRVKPANKNHRTTVGEKFSSSLYLLMETLNATTPHYVRCIKPNEEKMPFE
YDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSVLMSQEELGLNHKKLACKTV
LQRLIQDSDQNKFGRTKIFFRAGQVAYLEKLRLDRLRKACLTIQKHVRGWSHRRKFLRMR
EAAIVLQQYVRGQRQICKTVTAAALKQGWASVVIQRYWRSYLTRQIYRMVRSSSIIIQAF
ARGWIARKRYKKMVEVQKALILQKYARAWLARRRFQSLRRLVHNVQLSYRCQKLGKKLED
QAKENRGLLERLTGLTGAHAQGLDKLHCLEAQLGKSATEKASLDEREKKTMKTIAQLQEE
KVKLIVERQNLEKKCADSTTEMKDRFHQIKTTLKEDLERQERLRKIAENNLDLQKEDHET
EVEVLRKENRWLKEEIVGLQRQTEEEAQFNTDLQDQVIQLTRHVKVIPELRKDLHNLQTQ
RDDLGRKMKNQSEQARAKMSVITRQLLCGMVEEEVISRLTSDSPDQIYEVGNLSTAFDGL
QKACRVLERHQQEQKEGNESQMEA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggaactctatacgaagtacaacagagtgtggataccggatgcagagcat
gtctggaagtcagcagagattctgagagacttcaaacctggagacgaggctttagaactg
cagcttgacgatggcactgagatggtgtaccccctggacaaatccagtcctcagctccct
gacctccgcaaccccgatatcctggtgggagagaatgatctgacagctctcagctatctc
cacgagcctgccgtactacacaatctcaaagtgcgcttcgtggagtccaacattatctac
agctactgtggaatcatcctggtggctgtcaacccatacaagcagcttcacatctatgga
gatgcagtcattcaggcgtactctggacagaacatgggagctatggatcctcacatattc
gctgtggcagaggaggcttacaaacagatggacaagaacaataagaaccagtctgttata
gtgagtggtgagtctggagccggcaagactgtgtctgctaggtatgtcatgaggtacttc
gctatggtcagcaagtctagcagcagaacacacgtggaagacaaagttctggcatccaat
ccaataactgaggctattggaaatgccaagacgaccaggaacgacaacagcagtcgcttt
gggaagtacacagagatcagcttcgacaggagatatcagatcatcggggccaacatgagg
acgtatctcatggagaaatctagagtggtttcccagtcacagaacgagagaaactaccac
atcttctaccagatgtgtgcctgtgcagagcagtctgagttcaagagcctgagattgttg
agtgcagatgagttcaggtacacctgcatgggcggggagacgagtatcgagggggtggac
gacaggaaagacatggaagagacacgcaggaccttctcgttgttggggttaacggaggac
ttccagtcggatgtgttcaaggtgctggctgggattctacacctggggaatgtggagata
agaaacgttggatcagacagatcatcagttagttccagtgatcaacacctagctgctttc
tgtgaccttctcggggtcagtcctgatagtgttacccgttggctgtgccatcgcaggata
gccatggtggcagagacggtggtgaaggcggtgcccagtgaacgcgctgtgaactccaga
gatgccctcgccaagcagatctatgcccacctgttcgactgcgtcatccagaagatcaac
gcagccctgcaggtgccagggaaacagcactccttcataggagtactggacatctatggg
tttgaaacatttgacatcaacagttttgaacagttttgcatcaactttgccaatgagaag
cttcaacaacaattcaacttgcatgtgttcaagctggagcaggacgagtacatgaaagag
gatattccctggactctgatagacttctatgataaccagccggtcattgacctgattgaa
gcgaagatgggaatcctcgacctgctgaatgaagaatgtctgttcccccagggtacagat
cagaactggcttcagaagctgtacaactacctggctgacaaccctctgtttgagaagccc
aggatgtccaacaaggccttcatcattcaacattttgctgacaaggtagaatatcaatgc
cggggttttctagagaagaacagagacgcattgtatgaagagctggtggataccatggca
accagtaagtttcctctcctggccaacttcttcctggaggtggagccagatgggttgggc
actaaaggcatcaaagtgaggcctgcacagcctcgggtgaaaccagccaataagaaccac
aggaccactgtgggagagaagttcagcagttctctgtacctgctgatggagactctgaat
gccaccacccctcactacgtacgctgcatcaaacccaacgaggaaaagatgccgtttgag
tatgactctaagcgggtggtccagcagctgagggcatgtggagtcctggagaccattcac
atcagtgctcagagctacccttccaggtggacatacatagagttctacagccggtacagt
gtactgatgagtcaagaggagctgggcctcaaccacaagaaactggcctgtaagacagtg
ctgcagaggctaattcaggactcagatcagaacaagtttggccggaccaagattttcttc
cgagcgggtcaggtggcctacctggagaagcttcgattggaccgtctccgaaaggcatgt
ctgaccatccagaagcacgtgagggggtggagccacaggaggaagttccttcgcatgagg
gaggcggctatcgtcctccaacagtatgtccgtggacagcggcagatatgtaaaacggtg
acagctgcagcattgaaacagggctgggcttctgtggtcattcagaggtactggagaagt
tatctgacccgacagatctatagaatggtccgttcctcctctatcatcatccaagccttc
gctagaggctggatcgccaggaaacgctacaaaaagatggtggaggtgcagaaagcactg
atcttacagaagtatgcccgggcgtggctcgccaggagacgcttccagagcctgcgccgc
ctggtacacaacgtacagctctcctacaggtgccagaagctcgggaagaaactggaagat
caggccaaagagaaccgtgggctgttggagaggctgacaggtctgaccggtgctcacgcc
caaggtctagacaagctgcactgtctggaggcccagctggggaaatcagccactgagaag
gcttcgctagacgagcgagagaagaagaccatgaagacgatagctcagcttcaagaggaa
aaagtcaaattaatcgttgaaaggcagaacttggaaaagaagtgtgcagattcaacaaca
gagatgaaagacagatttcatcaaatcaagacaactctgaaagaagatttggaacgacaa
gaaagattgaggaagattgcagagaacaaccttgacctgcagaaggaggaccatgagacg
gaggtggaggttctgaggaaggagaacaggtggctgaaggaggagatagttggcctacag
agacagacagaggaggaggcgcagttcaacactgatctacaggaccaggtcatacagctc
accaggcacgtcaaggtgatacccgagttacgtaaagatcttcacaacctgcagacccag
agagatgatctgggcaggaagatgaagaatcagtcagaacaggccagagccaagatgagt
gtgatcacaagacaactactttgtggcatggttgaagaggaggtcatttccaggttgacc
tccgacagtccagaccagatctatgaagttgggaatttgtcgactgcatttgatggactg
cagaaagcttgcagagtgctggagagacaccagcaggaacagaaggagggcaatgaaagc
cagatggaggcgtag
DBGET
integrated database retrieval system
