Oncorhynchus gorbuscha (pink salmon): 124037530
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Entry
124037530 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K28076
finTRIM family protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124037530
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124037530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
ANCHR-like_BBOX
zf-RING_6
RING_XB3-XBAT31
ZapD
Prok-RING_4
MAP65_ASE1
Y1_Tnp
Motif
Other DBs
NCBI-GeneID:
124037530
NCBI-ProteinID:
XP_046208278
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Position
LG06:11580533..11629222
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AA seq
553 aa
AA seq
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MAQQGVQLDQDQFCCSVCLDVLKEPVTIPCGHNYCRSCIDGCWDQEVLKGVYSCPQCRET
FTPRPNLKKNNMLAEMVEKMKKTGLQAAPPPALCYGGPGDVACDICTGSRKRKALMSCLP
CLASYCENHLQSHYESPALKKHKLVKATTQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSASAERTEKQRQLGMSQQKVQQRFQEREKELKELRQAVESLKLSAQAAVED
SDQIFTELIRSIERRSSEVKELIRDQEKAQVSQVEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSNSVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNLVELVLHPEPKTREQLLQYSCQLTLDPNTAGTQLSLSEGNRKVTYTDQVQPYPGHP
DRFTNYYQVLCREGLSGRCYWEVEWSGECFDIAVSYKDISRTERASGFGLNDKSWSLECS
SDGYCFIHNNVETKASGPQSSRVGVYLDHKAGTLSFYRVSDTMTLLHSVQTTFTQPLYPG
FYLFFGTAELVKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttcagctggaccaggaccagttctgttgttctgtctgtctggat
gtactgaaggaaccagtcaccatcccctgtggacacaattactgtagaagctgtattgac
ggctgctgggatcaggaagttctgaaaggggtctatagctgtccgcagtgcagagagacc
ttcactccaaggcctaatctgaagaaaaataatatgttggctgagatggtggagaaaatg
aagaaaacaggactccaggctgctccccctcctgctctgtgctatggtggacctggagat
gtggcgtgtgacatctgcactggaagcagaaagcggaaagccctcatgtcctgtctgccg
tgtctggcctcttactgtgagaatcacctccaatctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccacacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagcttcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctcagacaggctgtggagtctctcaagctctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagaccaagagaaggctcaagtgagtcaagttgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtaacagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatttagtggagcttgtactgcatccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcaggcacacaactctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctggtcatcca
gacagattcactaactactaccaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggggagtgttttgatatagcagtctcatataaagacatcagc
agaacagagagagctagtggatttggactcaatgacaagtcctggagtttagagtgctct
agtgatggttattgtttcatacacaataatgttgagactaaagcatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagggtctct
gacacaatgaccctcctccacagtgtccagaccacattcactcagcccctctatcctggg
ttttatctcttttttggtactgctgagctggttaaactgtag
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integrated database retrieval system
