Oncorhynchus gorbuscha (pink salmon): 124037570
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Entry
124037570 CDS
T07892
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124037570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124037570
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
124037570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
nSTAND1
AAA_23
DEAD
TraD_N
Motif
Other DBs
NCBI-GeneID:
124037570
NCBI-ProteinID:
XP_046208351
LinkDB
All DBs
Position
LG06:13218849..13368105
Genome browser
AA seq
1594 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDRGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHSVGLRQLRYCITGLLALLYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HRRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRVKRPLGSMPQGPKWIWRALRQAFGRP
LIISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVL
AVLLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQIC
NLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVA
TKLSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRGKELTSLQTFAL
YTSISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVR
STVKALVSAQKLSEFFSSDEIGDEQEPNATMPTGPSNHKTIPSGPRNHNNKYQAVPLKVV
NRKRHPRDDWNNYNHEGGNPPPQEGDQDLCIRITSGYFTWTDGTPTLSNINIKVPFGQLT
MIVGQVGCGKSSLLLAALGEMQRVSGTVTWNILPSLDSEGDDSPTSDKDAADDGDIEKRG
SVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDQTEIGERGI
ILSGGQRQRIGVARALYQQTNVVLLDDPFSALDIHLSDHLMQEGICKLLREEKRTVVLVT
HKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSDPKLFEQWKTLMHRQDGEFEKETVAESM
TVLERKNLRRAMYSKEAAKTEEEHEEESVESEEDDSLSQAMRHRTTIPWRSCGVYLSSAG
LLLPLLLLSQLFKHTLMVAIDYWLAHWTSHVITAKMDATGRNCTVTQECGFSHSLYLSVF
SVLCCLGIVLCLVTSVAVEWTGLKVAKELHHNMLSKIILAPMRLFETTPLGNILNRFSSD
TNTIDQHIPATLECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFIQKYFRVASRD
LQQLEDSTQLPLLSHFSETVEGLTTIRAFRYESRFRQRLLEYTDANNIASLFLTAANRWL
EVRMEYVGACVVLIAAVASISNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQ
LGSVKRINGLLKTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLKQVNAH
ISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFSIILQD
PILFSGTIRFNLDPEMKATDDMLWEALEIAQLKPVVKTLPGGLDAMVTEGGENFSQGQRQ
LFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGIILEYDRPQALLEKEDSVFAAFVKADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcgttctgtggaaacgagaacaattcgttggcgtacaacgtggaccgcggc
gtcctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctctttgtcctggtctgtgagattgctgagggcatcgtctctgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaacatagagacctccaactttcccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagttcgccaagtacacggagcac
agcgttggcctgagacaactccgctactgcatcacaggactcctggccctgctctacgga
ctactactggctgtggagataaatgtcatactgggcaggcgctacttgtgtttcactgag
gctacagaggtgaagcctccagaggacctgcaggacctgggggtgaggttcctgcagccc
ttcgtcaacctgctgtccaaggccacctattggtggatgaacacattcatcacggcagcc
caccgccgccccatcgacctcaaggtcatcggcaagctgcctatcgctatgcgagccctc
accaactacctgaagctccgcaaggctttcgagagccagagggtaaagaggcctctgggc
tctatgccgcagggccctaagtggatttggagggccctacgccaggcgtttggacggccc
ctcatcatcagcatcaccttccgcttcctggctgaccttctgggcttcgctgggcccctc
tgtatctctggcatcgtccatcacatcagcaaggacaaccgcaccatacagcccccgata
aagctgctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgcta
gccgtgctgctgttcttcgccctcatcttgcagagaaccttcctccaggcctcgtattat
gtggctattgagaccggcatcaatttacgaggggctatacagactaagatctacaataag
atcatgcggctgtgcacctccaacatgtccatgggagaactgaccgtaggacagatttgt
aacctggtggccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctg
tgggccatgccagtccagatcattgtgggggtgattctactctactacctcctggggatc
agtgccttgatcggggccacagtcatcgctgtcctggcccctgtccagtactttgtggcc
accaagctgtcccaagcacagaagagcactctggagtactccagtgagcggttgaagaag
accaatgagttgctgcggggaatcaagctgctgaagctgtacgcctgggaacacatcttc
tgtcatagtgttgaggagaccaggggcaaggagctcaccagtctgcagacctttgcccta
tatacttccatatctatattcatgaacgcagccatccctatcgcagctgtcctgaccaca
tttgtggtccatgtgcacatctctgaggaggctgacctgtcccctgctgtagcctttgcc
tccttgtccctgttccacatcctggtcactcctctcttcctgctctccagtgtggtacgg
tccacggtcaaggccctggtcagtgcccagaagctgagtgagttcttcagtagtgatgag
attggagatgagcaggagccaaatgctaccatgcccacgggccctagcaaccacaaaacc
attccctccggccccagaaaccacaacaacaagtaccaggcagtgcctctgaaggtggtg
aacaggaagagacatcccagggacgattggaacaactacaaccatgagggaggcaaccca
cccccccaggagggagaccaagacctctgcatcaggataaccagtggatatttcacctgg
acagatgggactcccaccctgtctaacataaacatcaaggttccctttggtcagctgact
atgatcgtgggccaggtgggttgtgggaagtcgtccctgttgctggcagctctgggagaa
atgcagagagtctctgggactgtcacctggaacattttgcccagcctggactcagaggga
gatgacagccccacatcagacaaagatgctgctgatgatggagatatcgagaagagaggc
tctgtggcctacgcttcccagaagccctggctgctcaatgcgacgctagtggagaacatc
accttcgaaatgccgatgatcaaacccaggtacaaggctgtcattgaggcgtgttccctg
cagccggatatcgacatcctgccacagggagaccagacggagattggagagaggggcata
attctgtcaggagggcaacgccagcgtataggtgtagccagggccctgtaccaacagacc
aatgtggtcttactggatgacccgttctcagcgttggacattcacctgagtgaccacctg
atgcaggagggcatctgcaaactgctgagagaagagaagaggaccgtggtgctggtcact
cacaaactacagtacctaccacatgctgactggatcatagcgatgaaggacggcaccatt
cagaccgaggggactctgaaagacatccagaactctgatcctaagctgtttgaacagtgg
aagaccctgatgcaccggcaggacggggagtttgagaaggagacagtggctgagagtatg
acggtgttggagcgtaagaacctgcggagggcgatgtactccaaggaagctgccaagact
gaggaggagcacgaagaagagtctgtggaaagtgaggaggatgacagcctgtcccaggcc
atgcgtcaccgcaccaccatcccctggcgctcctgtggggtctacctgtcttctgcaggg
ctcctcctgccgctgctcctcctatcacagctcttcaaacacaccctcatggttgccatc
gactactggctggcccactggacctcccacgtcatcactgccaagatggacgccaccggg
agaaactgcaccgtcactcaggagtgtggtttcagccactcgttgtacctgtcagtgttc
agtgtgctgtgctgtctgggcatcgttctgtgtctggtcacctctgtggctgtagagtgg
acaggcctgaaagtggccaaagaactacaccacaacatgctcagcaagatcatactggca
cctatgaggctgtttgagaccactcccctgggtaacatcctcaacaggttctcctctgac
accaacaccatagaccagcacatccctgccaccctggagtgtctgagtcgctccaccctg
ctgtgtgtgtcggcgctgggggttatctcctatgtgacccctgtgttcctcattgccctg
gtgcccctggccatcgcctgctacttcatacagaagtacttccgggttgcctccagggac
ctccagcagttggaggatagtacccagctccctctcctgtcccacttctcagagacagtg
gagggcctcaccaccatccgggcattcaggtacgagtccaggttcagacagaggttattg
gagtatactgatgccaacaacatcgcatctctcttcctcacagcagccaatcgctggcta
gaggtccgcatggagtatgtaggagcctgtgttgttctgatagcagccgtggcctccatc
agcaactctctgtacaaccacctgtccactggcctggtgggactcggactcacctacgca
ctcatggtatccaactacctgaactggatggtgaggaacctggcagacatggaggttcag
ctgggttcagtcaagaggatcaacggcctgctgaagactgagcctgagaactacgaggga
ctgatggctgcatctcaggtgcctgatggctggccacggcaaggagagattcagatccag
aacctgagtgtgcgttacgacaccaccctgaaacctgtcctcaaacaagtcaacgcacac
atcagccctggacagaaggtggggatctgtggtaggacaggaagtgggaagtcttctttc
tccttggccttcttccgcatggtcgacatgttcgaggggcgtatcatcatagatgacatt
gacatcgccaagctgcctctgcagactctgaggtctaggttctccatcatcctccaggac
cccatcttattcagcggaaccatccggtttaacctggacccagagatgaaggctacagac
gatatgctgtgggaggctctggagatcgctcagctcaaacctgtagtcaagactttacca
ggaggactggacgccatggtgacagagggaggggagaacttcagccagggccagagacag
ctcttctgtctggccagagccttcgtcaggaagtctagcatcctcatcatggatgaagcc
acagcctctatagacatggccacggagagcatcctgcagaaggtggtgatgactgccttc
gctgacagaacagtggttaccatagcacatcgtgtccacaccatcctgaatgcagacctg
gtgatagtgatgaagagagggatcattctagaatacgacagaccccaggcactgctggag
aaagaggacagcgtctttgcagcattcgtcaaggcggacaagtga
DBGET
integrated database retrieval system
