Oncorhynchus gorbuscha (pink salmon): 124037614
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Entry
124037614 CDS
T07892
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124037614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124037614
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124037614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
124037614
NCBI-ProteinID:
XP_046208444
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Position
LG06:16589582..16632860
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AA seq
590 aa
AA seq
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MSHAILRRNSSKQGLQNLLKITTQRSVEDAEEVERERRRRARESFRSMGSSSTLGPGGPS
LDNGALAEDGLYERDLKPSSSSPSMEEDEGFSDWTQRLERRRQQAQRMEELSQATEEQDQ
RPLNGAAKPPTPHTLSGSATPTTSTSRQQRHKAEVEDEVEKKWGRKESERKGWEREEEVV
REEREGEEEAEKQRQEQMRVLKKREEDQRSDAEEKVKEKSKEVKISYTSKVVLHTEAKHG
NVNGDTAGEKVTSYMVKTKLRAPRAVVQMAAAEAEEEAILETEAKLEKIRRSHAEKENQE
LEQLKHKQAEAEQELEELKRRREERRQVRKEEERRSREEEQQRLAKEEEEKRRMKEDIER
RRMEAAERMKSLSTSSVDGDEMFSSLSPKGSVYKITERTESLNRSLKKSNSFKKTQPPVL
LAKIDDRLEQYTTAIEYSQEVKATKQGLTDIPMSPEPVSSKKNLFEAGEAWNQSLAKGTP
PKDAESLKVGVADMITQWVKGNPDGTSRSSPSRPADVKAGDVMQKKNMWEIIGETSPGIS
GAVAKGNASGKKYKFVMTAHGKYEKIPVDDDDENMDEYMNGKTDLYHGEY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgctatcctgagaagaaactccagcaagcaaggtttgcagaacctcttgaaa
ataaccacccagaggagcgtggaggatgcagaggaggtggagcgagagcgtcggcggagg
gcccgggagtccttccgcagtatgggcagcagcagtaccttgggccctggaggcccctca
ctggacaatggggccttggcggaggatggcctgtatgagagggatctgaagcccagcagc
agctctccctctatggaggaggacgagggcttcagtgactggacccagcggctggagaga
cgcaggcaacaggcccagcgcatggaggagctcagtcaggccacagaggagcaggaccag
aggccactgaatggtgccgcaaagccccccacaccacataccctctctggctcagccacc
cccaccacatccacctctcgccagcagagacacaaggcagaagtggaggatgaagtggag
aagaagtggggaagaaaggaaagtgagaggaaagggtgggagcgagaggaggaggtggtt
agagaagagagggaaggagaagaggaggcagagaaacagaggcaggagcagatgagagtg
ctgaagaagagagaggaggaccaaagatctgatgctgaggagaaggtgaaagagaagagc
aaagaggtgaagatctcgtacacatccaaagtcgtcctccatacagaggcaaagcatggc
aacgtcaacggagacacagctggggagaaagtgacatcatacatggtcaaaacaaaatta
agggctcccagggctgtggtacaaatggcagctgcagaggctgaggaggaggccatcttg
gagacagaggccaagctggagaagatccgacggagccatgcggagaaggaaaaccaggag
cttgagcagctcaaacacaagcaggctgaggccgagcaggagctagaggagctgaagagg
aggagggaggagagacgccaggtcaggaaggaagaggagcgcaggagcagagaggaggag
caacagcgtctagccaaggaggaggaggagaagaggaggatgaaggaggacatagagagg
aggaggatggaggcagcagagcggatgaagagcctcagtacctccagcgtagacggagat
gagatgtttagctcgctcagtcccaaaggctctgtctacaagatcacagagcgaacggaa
tccttgaaccgatccctaaagaaaagcaacagcttcaagaagacacagccccctgttctc
ctcgccaagatcgatgacaggctggagcaatacaccaccgccatcgagtactcccaggag
gtcaaggcaaccaaacagggcctgacggacatccccatgtcacctgagccagtgtcctcc
aagaagaacttgtttgaggctggagaggcctggaaccagagcctggccaaaggcactcca
cccaaggatgctgagagtctgaaggtgggcgtggcggacatgatcacccagtgggtgaag
gggaacccagatggcaccagcaggagctccccctcaagaccagctgatgtaaaagctggt
gacgtgatgcagaaaaagaacatgtgggagatcattggagaaacatcccctgggatttca
ggagcagtggcaaagggcaatgcatctggtaaaaagtacaaatttgtgatgactgctcat
ggcaaatatgagaagattcctgttgatgatgatgatgaaaatatggatgaatacatgaat
ggaaaaacagacctataccatggtgaatattga
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