Oncorhynchus gorbuscha (pink salmon): 124037647
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Entry
124037647 CDS
T07892
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124037647
Enzymes [BR:
ogo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124037647
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124037647
Prokaryotic type
124037647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
124037647
NCBI-ProteinID:
XP_046208527
LinkDB
All DBs
Position
LG06:18838780..18849306
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AA seq
690 aa
AA seq
DB search
MGGFQDITFSGFEQTHTHTHTCVGKLEYFTVRTLLNNLCPMADTEPMLVPAPGGEKRACP
ALEDEVAHSTKRPRVQKDENNRGGHSHKPAQDEAEEPEGEETEPLEEEDGEGAGLGSGEA
FAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVHEVNKEGKTVQLDDLSVPEEA
EEASVAEQPGSEVFTEEQKHQLEQLQLFKKKEDNVSIEMEDDTKEKRTLVHKAVKTLYPG
LETKTEEREGKKFIVAYHAAGQKALAEDKIAAAPRKHSWPKSRGAFCHFVLYKENKDTME
AINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAERLSHLNKCLNNFKLGNFCYK
KHPLKLGELRGNHFTVVIRNITGTDDQVQQAMTSLRETGFINYYGMQRFGTTAVPTHQVG
KAILQDNWNEVIDLILKPRPGAEKGYLVKCREEWAQSQDPEAALKKLPVKRCVEGQLLRG
LSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRRIEAFGLKAVEGDLVLRGGTA
FVLSAAEAETQSIQDVVMPLPGFDVIYPTHHVGKGYREKLSADNLDIDNMRHRVRDYSLA
GAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPPPVFNKEGKYRALRMEFSLPP
STYATMAIREVLKMDTSIKNQTQLNTIWLN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggtttcaagacattactttttccggattcgagcaaacacacacacacacacac
acgtgtgtaggaaaactggagtacttcactgtgcgtactctactgaataacttgtgtcct
atggcggatacagagcccatgctggtccctgcccctgggggggagaaaagggcctgccct
gccttggaggatgaggtggcccacagcaccaagagacccagagtccagaaggatgagaac
aacagaggaggacactctcacaagccagcccaggatgaggcagaagaaccagagggggag
gagacagagccactggaagaggaggatggagaaggggccgggttaggttctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattctgaaatttgtc
agtgaacacaagggcttctctgggatcctcaaggagaggtactctgactttgtcgtacat
gaggtcaacaaagaaggcaagacagtgcagttggatgatctctcggtccctgaggaggct
gaggaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacac
caacttgagcagctgcagctcttcaagaaaaaagaggacaacgtgtccatagagatggag
gatgacaccaaagagaaacgaaccctggtccacaaagctgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagcc
gggcagaaagcactcgcagaggacaaaatcgctgcagcccccaggaaacactcctggcct
aagagccgtggggccttctgccactttgtcctttacaaagagaacaaggacaccatggag
gccatcaacgtgctgtccaagttcctcaggatgaggcctaatgtgttctcttacatgggg
accaaggacaagagagccatcactgtgcaggagattgcagttctcaaggtcacagcagaa
agactgtctcaccttaacaagtgcctcaataacttcaagctgggaaacttctgctacaag
aaacaccctctgaaactgggggaactacggggaaatcatttcactgtggtcatcaggaac
atcaccgggacagatgaccaggtccagcaggccatgacctccctcagagagacaggcttt
atcaactactacggcatgcagcgctttggcaccactgccgtgcccacacaccaggttggc
aaagccatcctgcaagacaactggaatgaagtgatagatctgatcctgaagcctcgccct
ggagcggagaaaggttacctagtgaagtgtcgtgaggagtgggcccagtcccaggaccca
gaggcagcgcttaagaagctacctgtgaaacgctgtgtggagggacagctgctccgaggc
ctctccatgtacggcaagaagaacatcatcactgcatttgccatgatccctcgtaacaac
cggctgatgtacatccacagctaccagagctttatgtggaacaccatggtcagcagacgc
attgaggccttcgggctgaaagctgtggagggagacctcgtgctcagaggaggcactgcg
ttcgtgctgtctgcagccgaggcagagacccagtctattcaggacgtggtgatgccccta
ccagggtttgatgtcatctaccccactcaccacgtggggaagggctacagggagaagctg
agtgcagataacctggacattgacaacatgagacacagggtgagggactactctctggcc
ggggcctaccgacgcatcctcatcaaacccagtgacgtcagctgggaggtgattaactat
gatgaccctcgcatctctctggttcacacggatgtggagaaactagaggaccaacctcct
ccggtcttcaacaaagaggggaagtacagggctttgaggatggagttctctctgcctccc
tccacctatgccaccatggccatcagagaggtgctcaagatggacaccagcatcaagaac
cagacccagctcaacaccatctggctcaactaa
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