Oncorhynchus gorbuscha (pink salmon): 124037690
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Entry
124037690 CDS
T07892
Symbol
zc3h18
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 18
KO
K13092
nuclear protein NHN1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124037690 (zc3h18)
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
General mRNP proteins
124037690 (zc3h18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
124037690
NCBI-ProteinID:
XP_046208616
LinkDB
All DBs
Position
LG01:complement(41248398..41284508)
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AA seq
1144 aa
AA seq
DB search
MDTPESPTQSPESPNQSPQSPEEERAISDSEFLASPEEEEEDRLLSESELLNDEDNGGLD
EEGGEVGDSELDDDEDGGVVQERISDPEHDEADGEGERDRHTILEQEQEESVGMVMMGQE
RQESQSDEEEDRISQTPKSPDSEPEQERSSPLAEEMSSHEKEDESGEPSVKLAVETAEVD
DEEEEERLRRRRVVVNQMKEELSSVSRELDEHELDYDEEVPEEPNVLAPEEDDEVEKGPR
EGDEKEDKSVKKKEKIPILPPSPKDGPPKKPEESRAQDRGRRDSFRDKKDEDDGEIDEGE
IDDDDLEEGEVKDPMDRKVRPRPVCRFFMKGNCTWSMNCRFIHPGVNDKGNYSLISKPDP
FSPNGAPPGAPHPLIPGSNPWGGPAVEELPPPPPPVEPPVESAWERGLRHAKEVLKKATI
RKEQEPDFEEKRFNVTIGEDERDFDKENDFFRERSYRITREIRDPGDLEFRDPVYPNDPY
ADPYYDYEMEAFWRGGQYENFRVQYTETPLPYHYSERERERDPRERHRDRERDHRERERR
QREREREREREREKERMRRKEEWERDRMKRDEKERPVRERPPREPREKKEGEDKQPKGPP
RSPIDTNMPPNRPMMEPPLKTELMPMSKRPDEWKDPWRRSKSPRTRPGMSGSPPRGRRRH
RPSGSSVSLSNSSRSSSRSSSYTGSGSSRSRSRTSSFSSYSSHSSQHSSFSGSRSRSRSF
SSSPSPTPSAQRNAKNKAAAPLALGPKGIPSKPGAPSPPGREKAPPKKAPSPPLPGQPGK
PPKPTLEGAKPGNSREPREVGRPMPPQEGGKPLNLREGRRKERQQHNPPRRQTVSGSVSG
SSYSGSSSRSRSHSSSATISPSGSKKSRSLSVSSVSSVSSASSSSSVRSADSDDMYADLA
SPVSSASSRSPTPGHPHARKERGPPRDRDPNKDKGKPTKKDEPHPPREDRRKMDPSGLPP
RNTHGPMPRSGPGSRGHGPGGHPMHPPHGPPMGPPGGYGQHKDIKLTLLNKQQAERGNRK
RYMPSDKDRPTSPLSKRIAMSPERGRGDRRMPGRPPLSPRMDRPRGQGPRPMPPPGERKR
PLSPPPKSSGKGPGGLSSGSGKQPPGGPGSGKPSSTLSRREELLKQLKAVEDAIARKRAK
IPGK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggacacccctgagagtcccacccagtctcctgaaagccccaaccaatcaccccaatcc
ccagaggaagagagggcaatttctgacagtgagttcctggcatcccccgaggaggaggag
gaggacaggctgctctctgaaagtgagctgctgaatgatgaagacaacggtggtttagat
gaagagggtggtgaagttggggactctgagctggatgatgatgaagatgggggggtagtt
caggagcgtatctctgacccagagcatgatgaagctgatggggaaggtgaaagggatagg
catactattctagaacaggagcaggaggagtcagtggggatggtgatgatgggacaggag
cgacaggaaagccaatcagatgaggaggaggaccggatcagccaaactcctaagtcccct
gattctgagccagagcaggagaggtcatcccctttagctgaggagatgtccagccatgag
aaggaagatgagagtggggaaccgtctgtgaagttggcagtggagacagcagaagtagat
gatgaagaggaggaagagagactgaggaggaggagggtggtggtgaatcagatgaaggag
gagttgtcgtctgtgtccagagagcttgacgagcatgagctggactatgacgaggaggtt
cctgaggagcccaatgttctagcgcctgaagaagatgacgaggtagagaaaggacccaga
gaaggggatgagaaagaggacaagagcgtcaaaaagaaagagaagataccaatccttcct
ccatccccaaaagacggtccacctaagaagcctgaagagtccagggctcaggacagagga
aggagagattcctttcgtgacaaaaaggacgaggatgatggagagattgatgagggagaa
atagatgatgatgacctggaggagggagaggtgaaggaccccatggacaggaaggtcaga
cccagacccgtctgcaggttcttcatgaaaggtaactgcacatggagtatgaattgtagg
ttcatccatccaggggtcaacgacaagggcaactactctctcatctccaagccagacccc
ttctctcccaacggggcaccacctggagcaccccaccctctcattcctggaagcaacccc
tggggtggacctgctgttgaggagctccctccaccccctcctccagtggagcctcctgtg
gagagtgcctgggagaggggtctgagacatgccaaagaggtgttgaaaaaagctaccata
cgcaaagagcaggagccagactttgaggagaagcgctttaacgtgaccattggagaggat
gagcgagactttgacaaggagaatgatttctttagggaacgcagctaccgcatcaccaga
gaaatcagagacccgggtgacttggagttcagagacccagtctatcctaatgacccatat
gcggatccatactatgactatgagatggaggccttctggagagggggacagtatgagaac
ttcagagtgcagtacacagagacccctctgccctaccactacagtgagcgtgaacgtgag
cgggacccgcgagagcgccatcgtgaccgtgagcgggaccaccgcgagcgagaacgccgg
cagagagaacgtgaaagggaaagagagagggagcgagagaaggagagaatgcgcagaaag
gaggagtgggagagggatcgcatgaagcgtgatgagaaggagaggcccgtcagggagcgg
cctccacgcgaacctcgggagaagaaggagggggaggacaagcagcctaaaggtcccccc
aggtcccccatcgataccaacatgccccccaatcggccgatgatggagccgcctctcaaa
acggagctgatgcccatgtccaagcggccagatgagtggaaggacccctggcgccggtct
aaatcccccaggacacgtccgggcatgtccgggtcaccaccgcggggccgccggcgtcac
cggccctctggatcctctgtctcactgtccaactcctctaggtcttcgtcccgctcttcc
tcctacacaggctccggatcatcccggtctcgctctcgcacctcgtccttcagctcgtac
tccagccactcctcccagcacagctccttcagcggcagccgctccaggtccagatcgttc
tcctcgtctccctctccgaccccttcagcacagagaaacgccaagaataaagcagcagcc
ccactggccctagggcccaaaggcatcccgtcgaaacctggtgcgccttcccctcctggt
agggagaaggctccccccaagaaggctccaagcccaccactgccaggccagcctgggaaa
ccccccaaacccaccctagagggggctaagcctggcaactcccgcgagccccgtgaggtg
ggccgacccatgccgcctcaggaggggggcaaacccctcaacctgcgggagggccgacgg
aaggagcggcagcagcacaatccaccgaggaggcagacggtcagtggcagtgtgagtggc
agtagttactctggctccagctctcgctcaagatcccactcctcctctgcaaccatctca
ccttccgggtccaagaagtccaggtctctgagtgtgagcagtgtgtctagcgtgtcctcg
gcctccagcagcagctctgtgaggagcgctgactcagatgacatgtacgccgacctggcc
agccctgtgtcgtcagccagctcccgctccccaaccccaggacacccccatgcacgcaag
gagaggggccccccacgggacagggaccccaacaaggacaaagggaagcccactaagaaa
gatgagccccatccccccagggaggaccggaggaagatggatccctcaggcctccctccc
agaaacactcacggtcccatgcccaggtctgggcctggcagcaggggccatggtcctgga
ggccaccccatgcacccgccgcacggacctcccatgggtccccctggaggttacggccag
cacaaagacatcaaacttacgctcctcaacaagcagcaggcagagcggggtaacaggaag
cgatacatgccttcagacaaggacaggccgacctctcccctcagcaagaggatagcaatg
tctcctgagagaggtcgtggtgacaggaggatgcctggacggccccctctctctcctaga
atggaccggcctagaggccagggccctcgtcccatgcccccaccgggagaaagaaaacgt
cctctgtccccaccacccaagtcgtctgggaaaggtccaggggggttgtcatcgggctca
ggcaagcagcccccaggcggcccgggctcaggcaagcctagcagcacactgtcccgccgt
gaggagctgctgaaacagctcaaagctgtggaggacgccattgcccgcaagagggccaag
atccctgggaaataa
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integrated database retrieval system
