Oncorhynchus gorbuscha (pink salmon): 124037697
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Entry
124037697 CDS
T07892
Symbol
si:ch211-129c21.1
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ogo04090
]
124037697 (si:ch211-129c21.1)
CD molecules [BR:
ogo04090
]
Proteins
124037697 (si:ch211-129c21.1)
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GFIT
Motif
Pfam:
Sema
PSI
Ig_3
ig
I-set
Ig_2
V-set_CD47
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
124037697
NCBI-ProteinID:
XP_046208624
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Position
LG06:complement(22563802..22593753)
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AA seq
802 aa
AA seq
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MSPLSALGVFCGLFLPMCLGEYNTHSCIPRKSVLYQDNLKLFREEGIWNYSTMLVREDLG
LLLLGAREAVYALDINDISIKKSGVYWRVTEEKQRECTYKGKHAEIECRNYIRTLHKVDD
GTMYVCGTNAFSPTCDYMTYSEGQLRLEEAQEEGKGKCPFDPFQKYSSIMVGNDLYSATS
INFLGSEPVVLRSSSSALRTEFKSSWLNEPNFVYMDLVPESNNNPEGDDDKVYLFFSENA
MEYDFYNKLTVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPYIVQDVFLLK
NDDWRKSVFYAVFTPQSSSSDMSAVCAYSVSAIGDVFDKGKFKTPVTVETSHVKWVMYSG
EVPTPRPGACINNAARTLGMERSLDLPDKTLQFIRDRPLMDDAVQPLTGRPLLVKRGDLF
TRLVVDSVLALDGERYAVMFIGTENGYVQKAVNYAGEMFIIEEIQLYQTPEAIRTLRLSS
TGQLYAGSEYGAVQMPLSECGRYESCLDCVLARDPYCGWDLSTGLCSAVASSTFASVPTN
MIQSLKDGDISECPKSETMKPENYTLVPGNNIKLPCQPDSNLAQVQWLFSGQLLLSDTKY
YIYNGGILILNASAANTGQYTCESVEQVNSRPYTRTMAVYQLLPHTNLEEESETMTESPH
SHSTPLPELLEVTERPKALDPLPPPESQCEDGRVVGLQVVVALLSLMLVGLVAWSLYKGC
FRNRFSENSSAGQVKKPSDDYMQIQNNITSEFKLLGPTPSHSANKNQNAIIAFKGNGEHH
FSPGSNISTVDGLGYIDDESEI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctctctgccctaggtgttttctgtggattgttcctccctatgtgtctcggt
gaatacaacactcacagttgtatcccacggaagagtgtcctctaccaggacaatctgaaa
ctgttcagagaggaagggatttggaactactccactatgttggttcgagaggatctgggc
ctgctgctgctcggggctcgagaggctgtctatgccctggacatcaatgatatctccatc
aagaagtctggggtgtattggcgggtcactgaggagaaacagagggagtgcacatacaaa
gggaaacacgctgaaatcgaatgccgtaactacatccggaccctgcataaagtggatgac
ggcactatgtatgtgtgcgggacaaatgctttcagccccacctgtgattacatgacgtac
tctgaaggacagctgagactagaagaagcgcaggaggagggaaaagggaaatgccccttt
gatcccttccagaaatactcctccatcatggtcgggaatgacctctactctgctacctcc
atcaacttcctgggctctgagcctgtggttctccgcagctcctcctctgcgcttcgcact
gagttcaagagctcctggctcaacgagcccaactttgtatacatggaccttgtccccgag
agcaataacaacccagagggggatgatgataaggtctacctgttcttcagcgagaacgcc
atggagtatgacttctacaacaagctcaccgtgtcaagagttgctcgtgtctgcaagggg
gatatgggtgggcagcggacgctccagaggaagtggacgtcattcctgaaggctcgcctg
gactgctctctgccagagcccagcctgccatatattgtacaggatgtcttcctgctcaaa
aacgatgactggcgcaaaagtgttttctacgcagtgttcactccccagtcgagctcgtcc
gacatgtctgcagtgtgtgcgtacagtgtgtcggccatcggagacgtgtttgataagggg
aagtttaagacgccagtgactgtggagacttcccatgtgaagtgggtcatgtacagtgga
gaggtgcccaccccaagacctggagcttgcattaacaatgcagcacggacccttgggatg
gagcgctccctggacctgccagacaagaccctgcagttcatcagggaccggcccctcatg
gacgatgccgtgcagccgctgaccggccgtccgctgctggtcaaaaggggagacctgttc
acacgcctggtggtggacagtgtgctagctctggatggggagagatacgcagtcatgttc
atcggcacagagaacggctatgtgcagaaggcagtgaactacgctggagagatgttcatc
attgaagagatacaactgtaccagaccccagaggctatcaggaccctgcgtctctccagc
acgggtcagctgtatgcaggctctgagtatggagctgtacagatgcctctgagtgaatgt
ggccgttatgagtcttgtctggactgtgtcttagccagagacccttattgtggctgggac
ctctccactggcctctgctctgctgtggccagctcaacctttgcctcagtccccacgaac
atgattcaaagtctaaaagatggtgacatctcagaatgtccgaaatcagagacgatgaag
ccagagaactacaccttagttcctggcaacaacatcaagctgccgtgccagcctgactcc
aacctggcacaggtacagtggctcttctcagggcaactgctgctgtctgataccaagtac
tacatctacaatgggggtatcctcatcctcaatgcctctgccgccaacaccggccagtac
acctgtgagtctgttgagcaggtgaacagccgaccgtacaccaggacaatggcagtctat
caactgttgccccacactaacctagaggaggagagtgagacgatgaccgagtccccccat
agtcacagtaccccattaccagagctcctggaggtaacagagaggccaaaggctttggat
ccccttcccccccctgagtcacagtgtgaagacggcagggtggtaggcctgcaggtggtg
gtggcgctcctctctctgatgctggttggtctagtagcctggagtctgtataaaggatgc
tttagaaacagattctcagagaactcaagcgctgggcaggtgaaaaagccgtcggatgac
tacatgcaaattcaaaacaatataacttcagagttcaagctgctgggacctacacccagt
cacagtgctaacaagaatcaaaatgctatcatagccttcaaagggaatggggaacaccac
ttctctcctggaagcaatatttccactgtggatggtttggggtacattgatgatgagtca
gagatctga
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