Oncorhynchus gorbuscha (pink salmon): 124037713
Help
Entry
124037713 CDS
T07892
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00310
Lysine degradation
ogo00514
Other types of O-glycan biosynthesis
ogo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124037713
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124037713
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogo01003
]
124037713
Enzymes [BR:
ogo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
124037713
Glycosyltransferases [BR:
ogo01003
]
O-Glycan biosynthesis
O-linked Gal type
124037713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
124037713
NCBI-ProteinID:
XP_046208655
LinkDB
All DBs
Position
LG06:complement(23095626..23131837)
Genome browser
AA seq
622 aa
AA seq
DB search
MMLGMMPAVGAVGVGLFCALLVAFMPGGMSDIATLVQDPVRPESSLLKPKIMIAILARNA
AHSLPHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEQP
KSYTDEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADSDNLLTNPRILNLLMAE
NLTLVAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLR
RDASRELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDE
EKESFTHTIAEAMIDHNIEPSEYLYNPLMPQDKMGFDEIFLINLKRRLDRRQRMLSTMTS
LGLQATLTDAVDGKALNTSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWVQLV
ERGLSKVLVLEDDVRFEPRFKRRMMTIMEEVEKAQLDWDLIYVGRKRMQVRQPERSVEGV
NNLVEADYSYWTLGYALSVQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPR
DLKAFSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRQHQHARKTEQQGRIHT
VAQNSVTGDSPPPAARSTRDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgggaatgatgcctgcggttggagccgtgggagtcgggctgttctgcgctcta
cttgtcgccttcatgcccggtggcatgtcagacatagcgactctggtgcaggacccggtc
cgacccgaatcgtccctgctgaagccaaaaatcatgatcgccattctggctcgcaacgcg
gcgcacagcctgccgcactacctgggctgcatcgacaggctagactacccgaaggagcgg
atcgctatatgggcagcgacagaccacagtgtggacaacagcacagccatgctgagggag
tggctgaagcaggcccaggaccagtaccactatgtggagtggagacccatggagcagccc
aagtcctatactgatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtg
atgaagctgaggcaggctgctctgaaggcagcacgggaacgctgggcagattatatactg
tttgcagacagtgataacctgctgaccaaccccaggatcctgaacctactcatggctgag
aacctgactctggtggcccccatgctggagtctcgctctctctactccaacttctggtgt
ggcatcactccccagggttactataagcgtactccagactaccagccaatcagggagtgg
aagcgtctgggttgcttcgccgtacccatggtgcactctaccttcctgttagacctgagg
cgtgacgcaagtcgggagctggccttctacccccctcaccctgactacagctgggccttc
gatgacatcatggtattctccttctccgcccgacaggcagatgtccagatgtatgtgtgt
aacagagaacactatggcttcctgccggttcctctgaaggcctcacagaatgttgacgag
gagaaggagagcttcacacacactatcgctgaggccatgattgaccacaacatagagccc
tcagagtacttgtacaatcccctgatgccgcaggacaagatgggctttgatgagatcttc
ctgatcaatctgaaacgtcgtctggacaggagacagagaatgttgagcaccatgacctct
ctgggtctgcaggccacccttactgacgcagtggatggcaaggctctgaacacttctcaa
ctgcaggcgttgggtatagagatgattccaggttatcaggacccatactctggccgtgtt
ctaaccagaggagagataggctgcttcctcagccaccactccacctgggtacagttggtg
gagcgtggtctttccaaggtgctggtgttggaggatgatgtgaggtttgagcccagattt
aagaggcgaatgatgaccatcatggaggaagtagagaaggcccagctggactgggatctc
atctatgtggggcgtaagcgtatgcaagtgcgtcagccggagcgttcagtggaaggggtt
aataacctggtggaggcggactactcgtattggacgctgggctatgctctgtcagtgcag
ggtgccaggaagctgctggctgctcaggccttcagcaagatgctacctgttgatgagttc
ctccctgtcatgttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgg
gacctgaaggccttctccgtggaacccctcctcctctaccccacccactacacgggcgag
ccaggctacgtcagcgacacagagacctccaccatctgggacgacgaggccaccgccacc
gactgggaccgccagcaccagcatgccaggaagacagaacagcaaggccgcatccacacc
gtggcccagaacagtgtgacgggtgactcacctccacccgctgcccgctccacacgagac
gaactctga
DBGET
integrated database retrieval system
