Oncorhynchus gorbuscha (pink salmon): 124037729
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Entry
124037729 CDS
T07892
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124037729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124037729
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
RNases
124037729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
124037729
NCBI-ProteinID:
XP_046208681
LinkDB
All DBs
Position
LG06:24063141..24077915
Genome browser
AA seq
1269 aa
AA seq
DB search
MLRSTGFFLGIDCPFYTDSCNVKSVKDGCKRPYCHFRHSQQRRSSYGSNDIRKSNELYSK
QKEQCGYDPFKPEVVRPEEQQDGEPAAATVDMGALELELVNRAIEEVRSEVEREKKKLSR
IEDQEYDPTDSSPKVATKWPKPLAVTSHLAYDPGSYQMTTTADYNPTPRSSKYTLDSDSK
DNHASSMEYVPTSVTKIAVKKPVPRTQTPHLHSLPTSLKYSTIASCSKNKYTVDHSKPST
DMEYDPLCNYSAKIAGKNKKHQRTGNIKGEGKKRPHLSGTRKQSTDEEYVPTIKKPRQVI
PDPLKYTASFSESDEESSGIEYRPTSLSRLQRRKSSSGSVEDASGPGKGERTEGAVGGLK
QQRSQESKEQQDAAHWESEDLENQELVARQKDKPETEIVAGKTSQVKSSKVKNVHKSEKE
SSKKSGGGAGGGSSSKKGAGDGEKISDLKKSSHEAAKGDRKNQGKKEEKRKIKNTSIDKG
KEGKSKIRTDTFKGESSKRENERGKGGGDSKLQTSDKGKDSKFKEHKNGKYDSNEREKYS
KKVSKGSSKIGKDKVKKSSSSSSDGKTGKVKQRSLSHVDLFGDESVEEESQGDEEEETIV
RKSAAPFKRGSLTRRNVSELTPSSSEDEDVGAEDDGGYGDMDDCGVDYSSLQVDMDFDLD
DDPMEECLRIFNESKDVKTEDKGRQAKPSKDSEDEDSTESNQTTLFPGQRKRVSHFSAKG
STEATPKPPPYRRLTAQEICYQRMQIAQQQAAQLAAAVKTASTPSPFPGERKRVAHRPTP
LPSSSKSGLAVAKSAGSRGLSPTCTLPAGLSVKAQTSAGILSKTTTTVVQKRVAHTPTMK
SSAMKRPVIPTAFGAKVPTNVRQRYLNTFIDECMKFCPSEDLAFQMALEEEKVVYDRSSS
KNIYLNVAVNSLKKLRSKSSSPNSLVAMNPAVVGNRKSQSHEEVLGGRLAAKTSFTINRT
GKQQAEKLSGATLYRKLRDYLMSEERLQEHGYPRPHPERSGRAVVHNVPEKNNVDPFAKV
CCRCGAEYKINANGNCVRKEECNHHWGRLRRHKVSGGWETNYNCCSGTVGSPGCSVSKQH
VQDGRKESLGGYVQTFEKQLPPDGNCGVYALDCEMCYTKQGLELTRVTVINSELKVIYDT
FVKPESKVVDYNTRFSGVTEEDLENASITLRDVQAVMLNMFNAESILIGHSLESDLFALK
VIHSTVVDTAIVFPHRLGLPYKRALRNLMADHLKRIIQDSVEGHDSSEDACACMELMMWK
IREDAKVKR
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggtttcttccttgggattgattgcccgttttacacggatagttgc
aacgtgaaaagtgtcaaagatgggtgcaaaagaccgtactgtcacttcagacacagccaa
cagagacggtcgtcttatggatcaaatgacataagaaaatcaaacgagctttactccaaa
caaaaggagcaatgcggctatgacccattcaaaccagaggtagtgagacctgaggagcaa
caggatggggagcctgctgctgcgacagtggacatgggtgccttggagcttgagttggtc
aatcgtgccatcgaggaggtacgcagtgaggtggagcgggaaaagaagaaactgtcacga
atcgaggatcaggaatatgacccgaccgacagttcccccaaagtggctactaaatggcca
aaaccactggccgtgacatcacacttggcgtatgacccaggcagttatcagatgactaca
acagctgattacaaccctacccctcgctccagtaagtacacattggattctgacagcaaa
gacaaccatgccagctccatggaatatgtgcccacctcagttaccaaaatagctgtgaaa
aagcctgttcctcgaacacaaactcctcatctacactctttgcctactagtcttaaatac
tccactattgcatcctgctccaagaataagtacacagtggatcattctaaaccatccaca
gacatggaatatgaccccctctgcaactattcagcaaaaatagctggcaagaataagaaa
caccagaggacaggaaatattaagggtgaaggaaaaaagagacctcacctgtcagggaca
agaaagcagtcaacagatgaggaatatgtgccaaccattaagaagcctcggcaggtaata
ccagacccactgaagtacactgccagtttctctgagtctgatgaagagagctctgggata
gagtatcgacccacctctctcagccgtctgcagaggaggaaaagcagcagtgggtcagtg
gaggatgcctcaggtccagggaaaggagagaggacggaaggagccgtaggtgggctgaaa
caacagaggagtcaggagtctaaagagcagcaggacgccgcacactgggagtcagaggac
ttggagaaccaggaattggtagctaggcagaaagacaagccagagactgaaatagtggca
ggtaaaaccagccaagtgaagagcagcaaagtaaagaatgtgcataaatctgaaaaggag
tccagtaaaaagagtggtggtggtgctggtggtggtagtagtagtaaaaaaggagcaggg
gatggtgagaaaataagtgatttaaagaaatcaagccacgaagctgcaaagggagaccgc
aagaatcagggaaagaaagaagaaaaacgcaagataaagaatacatctatagacaaaggc
aaggagggaaagagtaagataaggacagacacatttaaaggggagtcaagcaagcgggag
aatgagcgaggaaagggaggtggggatagtaaactgcagacttcagacaaaggaaaggac
tctaagtttaaagaacacaagaatggtaaatatgacagcaatgaaagagaaaaatattca
aagaaagtaagcaaagggagttctaaaattggtaaagacaaggtgaagaaaagcagcagt
agctcctctgatggcaaaacaggaaaggtgaaacaaagatctctgagtcacgtagatctg
tttggtgatgagagtgtagaggaggaaagtcagggggatgaggaagaggagacaattgtg
aggaagtcagctgctcctttcaagagggggagtttgactaggaggaatgtctcagagctc
accccctcatcctcagaggatgaagatgttggtgcagaagatgacggaggctatggtgac
atggatgattgtggggtggactactccagtctgcaggtggacatggactttgacctggat
gatgacccaatggaggagtgcttacggatcttcaatgaatccaaggatgtgaagactgag
gacaagggaaggcaagccaagccctctaaagattcggaggatgaggattccacagagagc
aatcaaaccactcttttccccggtcagaggaaaagggtttcacatttctcagccaaagga
agtactgaggcaaccccaaagcctccaccatacaggagactgactgcccaggagatctgt
taccagcgtatgcagatagcacagcagcaggctgcccagctggctgcagctgtgaagact
gcctccacacccagccctttccctggggagaggaagagagtagcccaccgccccacccct
ttaccatcctcttccaaatctggtcttgccgtggcaaagtcggcgggcagcagagggttg
tcgcccacctgtaccctcccagcaggtctctctgtgaaggcccaaacatcagccggcatc
ctgtcaaagaccaccaccactgttgtacagaagagggtggcacacactcccacaatgaag
agctctgcaatgaagcggccagttattcccaccgcgtttggggccaaagttccaaccaac
gtccgccagcgatacctcaacacatttatagacgagtgtatgaagttctgcccctctgaa
gacttggccttccaaatggccctggaggaggagaaggtggtgtatgaccggagcagcagt
aagaacatctacctcaacgtggcagtcaactccctgaagaagctacgcagcaagagcagc
tcccccaactcactcgttgccatgaaccctgcagtggtggggaacaggaagtcccagtcc
catgaagaagtgctggggggacgcctcgctgccaagaccagcttcacgataaacaggacg
ggcaagcaacaggcagagaaactcagtggtgctactctgtaccggaagctgagggactat
ctgatgtcagaggaacggctgcaggagcatggataccctaggccacaccctgagcgctca
ggtcgagccgtggtccacaacgtcccagagaagaacaacgttgacccgtttgccaaggtg
tgctgtcgatgtggggccgagtataagatcaatgccaacggcaactgtgttcgcaaggag
gagtgtaatcaccactggggccgtctgcgcagacataaagtgtcgggaggctgggaaacc
aactacaactgctgctcaggaactgtgggctctcctggttgctccgtgtctaagcaacat
gttcaggacggccgcaaggagtctttgggtggctacgttcagacctttgagaaacagctg
ccccccgatggcaactgtggagtctatgccctggactgtgagatgtgctacacaaagcag
ggtctggagctgaccagggtgactgttatcaactctgagctgaaagtcatctatgacaca
tttgttaaacctgaaagtaaagttgtagactacaacacacggttttcgggtgtaacggag
gaggacctggagaatgccagcatcaccctgagagacgtgcaggcggtgatgctcaacatg
ttcaacgctgaatccatcctcataggacacagcctggagagtgacctttttgccctcaag
gtcatacacagcactgtagtggacacagcgatcgtgttcccccatcgcctgggcttgccc
tacaagcgggccctaaggaacctcatggcagaccacctcaaacgtatcatacaggacagt
gttgaaggtcatgactccagtgaggatgcctgcgcctgcatggagcttatgatgtggaag
atccgagaagacgccaaggtgaagaggtga
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