Oncorhynchus gorbuscha (pink salmon): 124037758
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Entry
124037758 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 7-like
KO
K24055
leucine-rich repeat-containing protein 7
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124037758
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
124037758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_At5g56370
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
124037758
NCBI-ProteinID:
XP_046208731
LinkDB
All DBs
Position
LG06:complement(25576453..25745658)
Genome browser
AA seq
1522 aa
AA seq
DB search
MDNYSHLQLQCLEMTTKRKIIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLRELDISKNGIQEF
PDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWMDNNSLQTIPGCIG
KLRHLRYLDLAKNRIESLDTDISGCESLEDLLLSSNMLQHLPDTIGMLKKLTTLKVDDNQ
LTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHNLRTFSADENFLVELPREIGNCKNV
TVMSLRSNKLEFLPDEIGQMTKLHVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKALI
PLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAFEFEEKK
EEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKNQQPLSINCSGTNMEXTKKEQ
YEPPWPMPPKEVTGQDSMGGSPNDIRISDMRPTLVEPAMYKPKVVLLGKDKKESIDESDP
DKMHCLNNSGSSATYSDYSPSQGSSGSSNPPGNGSTLQAAGKDGGVPQQHWTNRLAQQFP
KPIETKPLLSQRDPRETPPSSTLQQRSERRPLSDTFDQWNDSSHYDNTGFVSEEAPLETP
SGSSSGNPMLGSKSCSASTSHGGRRPLMRQERIVGIPLELQDAPHQHPSHQFHNVRNMPE
TEVSQPPPPNPWQNWTRTPSPFEDRTAFPSKLSSPGNSPNPDRNDFEQEMHHGELPGTFP
STGTWGYLDSRNSGQGRSSQQANMYQHVQSKPTRPSSGAIVMSKSSERLSPMMKEVKAKF
KKSQSIDEIDMGSYNVYSIPVDTYSSSIENQGSVDRPDMPGPMEQSMSRSQSAPMLDDDD
AYGTNSQQQKPSIPKKVYHFDQSFKPQGAMDLRNQQQERRAPPPFPNTPEYVNHPGKTLP
KELVSPRGYRGYPPMDQMFSYSQPSVNEENQPPQQQQPFPIPSQRSRPGFLRRADSLVSS
TELALFRRVQEAQEMQQKLEHYGRQHFKGMLEHQNSLASMTQQDQQYNKRNGRYEEDYSS
YQEPKKPIMGYPTKSLTQRRPLSARSYSTETFGASQARPVSARPTMAALLEKMPPDYNLS
TCTENIKSPDEMKMRTMQLQHKPDDMSSKMPVDWRQQLLRHIEAKRLDRSAFLKHNTVNL
GMLCSGGYAAPHASRSMTINFHNNMNKHENQTTQWLPLPNTPSQQSNMLDNGQEVVSPTT
QWAPYSLGRRDVPPENIMKKIPDSLPNGLNYPQAGGHHHHPHQSQTMIVTSTSATPPHRS
LRDQQYEGAINKISIQQYQSPLPMATTTRPQSARCLIQTKGQKSMDDFQEQFCVRIEKNP
GLGFSISGGISGQGNPFKPSDMGIFVTRVQPDGPASNLLQPGDKILKANGHSFLHMEHET
AVSLLKNFQKTVDLVILRESTI
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggacaattactcacatctacaactgcagtgtctggagatgacgactaagaggaagatc
attgggcgcctggtgccgtgccggtgcttccggggtgaggaagaggtcatctcagtgctg
gactactcccactgcagtctacagcaggtgcccaaggagatcttcagcttcgagcgcacg
ctggaggagctctacctggacgccaaccagattgaggagctgcccaagcaactatttaac
tgtcaggctctccgtaaactgagcatacctgacaatgacctgtcaaacctgccaaccacc
atagccagccttgtaaacctgagggagttggacatcagtaaaaacggtattcaagagttc
ccagacaacattaaatgctgtaaatgcctatctgttgtggaggccagtgtaaatcctatt
gccaagctcccagagggcttcacccagctcctcaacctgacacagctcttcttaaacgat
gcctttctggaatacctccccgccaactttgggagactttccaagttacggatcctggaa
ttgcgagagaaccacctgaaaacgatgccaaagtcaatacacagactgtcacagctggag
cgattagacttgggaagcaatgaattcactgaactgcctgaagtcctggagcagatccat
aacctaaaggagctgtggatggacaacaactcactgcagacaatacctgggtgtataggg
aagctgaggcatctgcgctacctggacctggctaaaaacaggattgaaagccttgacact
gacatctctggctgtgagtccctggaggacctcctgctctcctccaacatgctgcagcat
ctgcctgacaccataggaatgttgaaaaaactcacaacattaaaagtggatgacaaccag
ctcacctcactgcctaacaccattggaagtttatcgcttttagaagagtttgactgcagc
tgtaatgaattggagtccctgcccccaaccattggctacctgcataacctccgcacgttt
tctgctgatgagaacttccttgttgaactacccagggagattgggaactgtaagaatgtg
acagtcatgtcgttgcgctccaataagctggagtttctacctgacgaaattgggcagatg
accaagctacatgttctcaatttaagcgacaatagattaaaaaaccttccgttcactttc
acaaaactaaaagatcttgctgctctttggctatcagacaatcagtccaaggccctgatc
cctctccagaccgaggcccatccagagaccaagcagagggtcctcaccaactacatgttc
cctcagcaaccacgacatgatgaggactaccagtcagacagtgacagtttcaaccccacc
ttatgggaggagcagcgtcagcagaggatgactgtggcctttgagttcgaggagaagaag
gaggaagaggacaactctggaaaagtcaaggttgagatcaatctgaagcgctaccccaca
ccgtacccagaggacttgaagaacatggtgaagtcagtacagaacatggtgggcaagaac
cagcagcccctcagcattaactgctctggtaccaatatggagntcacgaaaaaagaacag
tatgagcccccctggcccatgccccccaaagaggtaacaggccaggactctatgggcggc
tctccgaatgacatccgtatctctgatatgaggcccaccctggtggaaccggccatgtac
aaaccaaaagttgtattactggggaaagacaagaaagaatctatagatgagtcagaccca
gacaagatgcattgcctgaacaacagtggctcgtcggccacgtactccgactactctccg
tcccagggttcttctggctcttccaaccccccggggaacgggtccaccctgcaggctgct
gggaaggatggaggagtgcctcaacaacactggaccaacaggctggcccagcagttcccc
aagccgatcgagaccaagcccctactgagtcagagagaccccagagagacccctccctcc
agcacactgcagcagcgcagtgagcggcgccccctcagcgacacctttgaccagtggaac
gactcctcccactatgacaacacaggattcgtgtctgaagaggctcctctggagactccc
agtggtagcagcagtggtaaccccatgctgggctccaagtcctgcagcgcctccacctcc
catgggggccgccggcccctcatgaggcaggagcgcatcgtaggcatccccttggagctg
caggatgcccctcaccaacacccctcccaccaattccataatgtccgcaacatgcccgaa
actgaagtatctcagcctccccctcccaacccgtggcagaactggacgaggacgcccagt
cccttcgaggaccgcacagctttcccctccaagctgagctccccaggcaacagccccaat
cctgaccgcaacgactttgagcaggagatgcatcatggagaactgccgggcactttcccc
tccacaggaacgtggggttacctagactccaggaactctgggcaggggcgcagcagccag
caggccaacatgtaccaacatgtccaatccaagcccactagaccaagctctggggccata
gtgatgagcaagagctctgagcgcctctctcccatgatgaaggaggtgaaggctaagttc
aagaagtcccagagcattgatgagatagacatgggctcctacaatgtgtacagtattccc
gtggacacctacagctccagcatagagaatcaggggagtgttgaccgtccagacatgccg
ggccccatggagcagagcatgtcccggagccagtctgcccccatgctggacgatgatgat
gcctacggaactaatagccagcagcagaagccttccatccccaagaaggtctaccacttc
gaccagagcttcaagcctcagggggctatggatttgaggaatcagcagcaggagaggagg
gctcctccacccttccccaacacccctgagtacgtcaaccatccagggaagaccctgccc
aaggagctggtgagccccaggggctaccggggctaccctcccatggaccagatgttctcc
tactctcagccctcagtcaacgaggagaaccagccgccccagcagcagcaacctttcccc
atccccagtcagcgctcccggcctgggttcctgaggcgggccgactccctggtcagctcc
acagagctggccctgttccgcagggttcaggaggcccaggagatgcagcagaagttggaa
cactatggccggcaacatttcaaaggcatgttggagcaccagaacagtctggccagcatg
acccagcaggaccaacagtacaacaagaggaacggcaggtacgaggaagactactcctcc
taccaggagcctaagaagcccatcatgggctaccccactaagagcctgacacagcggcgc
cctctgtcggccaggagttacagcacggagacgttcggggcgtcccaggccaggcctgtg
tctgccagacccaccatggctgccttgttggagaagatgcccccagattataatctgagc
acttgcactgagaatataaagagccctgatgagatgaaaatgcgcaccatgcagctgcag
cataagcctgacgatatgtcctctaagatgccagtagactggaggcaacagctgcttaga
catatagaggccaaacgattagaccggagcgctttccttaagcacaacacagtaaacttg
ggcatgctgtgctctggaggctatgctgcaccgcatgccagcagaagcatgacaataaac
tttcacaataacatgaataagcatgaaaaccaaacaacgcagtggctacctctacccaat
accccctctcaacagagcaatatgttggacaacggccaggaggtggtctctcccactact
cagtgggccccctactcactgggcaggagagacgtgcccccagaaaacatcatgaaaaag
attcctgattctttgcctaatgggttgaattacccacaggcaggcggccaccaccaccac
ccccaccaatcacagaccatgatcgtgacatccacatcggccacacccccacaccgctct
ttgcgggaccagcagtatgagggtgccatcaacaagatctccatccaacagtaccagtct
cccctgcccatggccaccaccacccgtccccagagtgcacgctgcctcatccagaccaaa
ggccagaagagcatggacgacttccaggagcagttctgtgtgcggatagagaagaatcca
ggtttagggttcagcatctcagggggaatcagtggccaagggaaccctttcaagccttct
gacatgggtatctttgttactagggtacagcctgatggaccggcctccaacctgctacag
cctggggacaaaatactgaaggccaatggacatagttttttacacatggaacatgaaact
gctgtgtctcttctgaagaatttccagaaaactgtggacttagtaatcttgagggagagc
acaatttaa
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integrated database retrieval system
