Oncorhynchus gorbuscha (pink salmon): 124037784
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Entry
124037784 CDS
T07892
Name
(RefSeq) paired amphipathic helix protein Sin3b-like isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124037784
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124037784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
MCP_V20_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
124037784
NCBI-ProteinID:
XP_046208787
LinkDB
All DBs
Position
LG06:complement(27663190..27672894)
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AA seq
1222 aa
AA seq
DB search
MSVTISGIMAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFG
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNG
VVFLQSPFSAQVSPGQGKSMTSPAVSATGSSVAEVGSAQSEAVASPESIYSSSGPPEPPS
RLSLPLPSRESPSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQVHCVINMKEQLEVKESRGHGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKR
SLFTGSSLTGKDHLKRAEDEDMSKQSKKRPRPMLLPHMTPLLKKKMKFSCSKDQSFASVG
KHGVLREFTFFDKLRRFFKSREVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYT
QFKSFLGDKELSHSVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTA
ICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES
VQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVV
LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIES
VYDERQEQSTEEGGVGQQGRDGSSAPAVSDPHMVFTYEDKQILEDAASLIIYHVKRQPTI
HKDDKDHIKRIIQHFVPDLFFSRRGELSETEDWTDEEVEERGDRGGGGCGSIPGAVATSG
SQQHQHQQQNGESRRRRCASPQTVELGVASSHSLTPVGGEKVDLRDPEAEHQKELDGVYN
LFFVNNNWYFFLRLHQTLCQRLLRVYRQAERQLLDHRAEQNRERLLMAECRDLAMELRLK
QPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNIIRQL
QHLVSDEVCLQVAELYLAERKRGAAGANLSSQCVRTAWETSYQWKSERVMAEENCFKVMF
IQNQGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTESTLCSQNKGYFFKPVFLPR
NLRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGA
LVKARKSQHRVAVNQHERFDKWHQGWLVEHVTPAAERSVHDWLIGEEEEDMIPCKTTCLN
TQVKGLPVNRYQVHYSRKPPSP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactatctccgggatcatggcgaaaattcaggcacacagcaacacgaaacaa
ataaaccaaattcaagacaaggcctatgttgtacaaaagcaagtgcaacaacagcacttt
caaaaactgaaggttgaagatgccctatcatacctggaccaagtcaaaatacgatttggg
aatgaccctggaatatacaacaaatttcttgacataatgaaagaattcaaatcacaaagc
attgacacaccgggtgttataaaccgtgtgtctcagctcttccatggccacccggacctc
gtcttaggattcaatgccttcctgcccccagggtatcggatagagattcccaagaatggt
gtggttttcctccagtccccattctctgcccaggtgtccccaggtcaggggaagagtatg
acaagccctgctgtgagtgccacaggttcatctgttgctgaagttggatctgcccaaagt
gaagctgtggcatcgcctgaaagcatctactcatcctcagggcccccagagcctcccagt
agactgtccttgccactccccagcagagagagcccatcccagccacagtcctcctcagtg
tccccccctgcctcagagcccagcccagtagaatttgacagtgctatcagctatgtcaac
aaaatcaaaaaccgcttcctagaccatccagagatctacagatccttccttgagatacta
cacacttaccaggtacactgtgtcatcaatatgaaagagcagcttgaggtcaaggagagc
cggggtcatggtagtagtggaatgacagaggatgaagttttttcaaaagtggccagcctc
ttcaaaggccaagaggacttactggctgagtttggacagttcttaccagatgctaagaga
tcactgttcactggcagctccctgactgggaaagaccatctgaagagggcagaggacgag
gacatgagcaaacagagcaagaagagacccaggcccatgctgctgcctcacatgacaccg
ctgctcaagaaaaagatgaagttttcatgctccaaagaccagtcctttgcctcagttggg
aagcatggagtcttgcgggagttcacattttttgacaagcttcgccgtttcttcaaaagt
cgggaggtatacgagaacttcctccgctgtattgctttgtttaaccaggaagtggtttcg
ggagcagagctgctgcagcttgtcactccctttctggggaagtttccagagctatatacc
cagttcaagtcttttctgggggacaaagagctctctcattcagtgtctggcctgtcagac
cgatacatggaaggaggtgggggcagggaggtcgactatgcctcttgcaagcgcctggga
tccagctacagagcactacccaagacttaccagcagcccaagtgcagcggtcgcactgct
atctgcaaagaggtgctgaatgacacctgggtttctttcccctcgtggtcggaggactct
acgtttgtgagctcaaagaaaactccatatgaggagcagcttcatcgctgtgaggacgaa
aggtttgagttggatgtggtcctggagactaacctggccaccatccgggtcctggagagc
gttcagaagaagctgtcccgtctgtcgcctgaggaccaggaccgcttccgtctggacgat
tgtctgggaggcacctctgaggtcatccagcgccgagccatctaccgtatctacggcgac
aaggcccctgagattatagaggggctgaagaggagccctgctactgccgtgcctgtggtg
ctcaagagattgaaagcaaaggaggaggagtggagagaagcccagcagggcttcaacaag
atctggagggagcagtatgagaaggcctacctcaagtccctggaccaccagggggtcaac
ttcaagcagaatgacatgaaggcccttcgatccaaaagcctgctcaatgagattgaaagt
gtttatgatgagcgtcaggagcagagcacagaggaggggggcgtgggccagcaggggcgt
gacgggagcagcgcgccagcggtcagcgatccccacatggtgttcacctacgaggacaag
cagatcctggaggacgccgcctctctcatcatctaccacgtcaaacgccagcccaccatc
cacaaggacgacaaggaccacatcaagcgcatcatccagcactttgtccccgacctcttc
ttctcccgccgcggcgagctcagcgagacggaggattggacggacgaggaggtggaggag
agaggagaccggggaggaggaggatgtggcagtataccaggagccgtagcaacatcaggc
agtcagcaacatcagcatcagcagcagaacggggagtcgaggcggcggcgctgcgcctct
ccccagacagtggagctgggtgtagcctcgtcccatagcctgactccagtgggaggggag
aaggtggacctaagagaccctgaggcagagcaccagaaggagctggacggagtctacaac
ctgttcttcgtcaacaacaactggtacttcttcctgcggcttcaccagaccctgtgccag
cggctgctgagggtgtaccggcaggcggagaggcaactgctggaccaccgggcagagcag
aaccgtgagaggcttctaatggccgagtgccgggacctggccatggagctccgcctcaaa
cagcccagtgaggtagaactggaggagtactacccagcgttcctggatatggtgcgcagt
cttctggatgggaacctggagtccacacagtatgaggacacattgcgggagatgttcacc
atccacgcctacattggcttcaccatcgacaagctcatccagaacatcattagacagctg
cagcacctggtgagtgatgaggtgtgtcttcaggtggctgagctgtacctggccgagagg
aagaggggcgcggcgggggctaacctgtcgtcccagtgtgtgagaacagcctgggagacc
agctaccagtggaagtcggagagggtcatggctgaggagaactgctttaaggtaatgttc
attcagaaccaaggccaggtgaccttgaccattgagctgctggacacagaggaggcccag
gctgatgacccattggatgtacagtgcctgtccagctatatggaacagtttgtagggaca
gagtcaacgctttgctcgcagaacaaaggctactttttcaaaccggtatttttgcccagg
aacctgaggcacttcagacgctggcaggtgcgccaggtggaggcgatgcgttgcagacgg
gagtggcacagacagctgggagtggagagtgctggcagtctggactgccgctttaaactc
aacacccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcg
ctggtcaaagccaggaagtcccagcacagggttgctgtgaaccagcacgagcgctttgac
aagtggcaccagggctggctggtggagcacgtgaccccggcggccgagcgctcggtccac
gactggctcataggtgaggaggaggaggacatgatcccctgcaagaccacctgcctcaac
acacaggtcaaaggcctgcctgtcaacagataccaggtgcattacagtaggaaacctccc
tctccgtag
DBGET
integrated database retrieval system
