Oncorhynchus gorbuscha (pink salmon): 124037786
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Entry
124037786 CDS
T07892
Name
(RefSeq) replication factor C subunit 4-like
KO
K10755
replication factor C subunit 2/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03030
DNA replication
ogo03410
Base excision repair
ogo03420
Nucleotide excision repair
ogo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124037786
03410 Base excision repair
124037786
03420 Nucleotide excision repair
124037786
03430 Mismatch repair
124037786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124037786
03036 Chromosome and associated proteins [BR:
ogo03036
]
124037786
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124037786
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124037786
DNA Replication Termination Factors
ELG1-RFC complex
124037786
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124037786
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124037786
Check point factors
HRAD17(Rad24)-RFC complex
124037786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_30
AAA_22
AAA_assoc_2
AAA_11
Mg_chelatase
DUF815
AAA_24
RuvB_N
SLFN-g3_helicase
AAA_14
AAA_28
AAA_5
AAA_19
Gp44_lid
RPA_interact_N
Cdc6_lid
ResIII
AAA_7
Kinesin
ATPase_2
Motif
Other DBs
NCBI-GeneID:
124037786
NCBI-ProteinID:
XP_046208792
LinkDB
All DBs
Position
LG06:complement(27706293..27714837)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGAGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANRVQEERLLEICYKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLQICYKGTFEKLEIAVRNLVDEGYAATQI
INQLHEAVIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQLLSLCSVILQQATQSN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatctactcaaggcaccagacctctgaaagagaaaggt
gccgggaccagtggagagaagaagcagaagtctgtcccctgggttgagaaatatagacca
aaatgtatggaagaggtggcatttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgccgatctccccaatctgctgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtcctg
gaactgaacgcctctgatgagagagggattcaggtggtcagagagaaagtcaagagattt
gcccagctgactgtagcaggacaccgcactgatgggaaaccatgcccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaacgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactatgtcagcaggatt
attgagcccttgacatccagatgctcaaaattccgcttcaaacctctggccaatcgggtc
caagaagagcgcctgctagaaatctgttacaaggagaatctcaagtactcgaaggaggga
attgcagcgttggtgaaggtttcagagggggatctgagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagcgcggtcatagagatagca
ggggttgttccccccaagatgatagacaatttgcttcaaatctgttacaagggcacattt
gaaaaactagagattgctgttcggaacctggtagatgaaggctatgccgccactcagatc
atcaaccagctacacgaagccgtcatagaggaagagctgaacgacaagcagaagtctgcc
atcacggaaaaaatggcagtggttgataagtgtctagtggatggtgcagatgagtacctg
cagttgctgagtctgtgttctgtgatcttgcagcaagccacccagagtaactga
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integrated database retrieval system
