Oncorhynchus gorbuscha (pink salmon): 124037875
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Entry
124037875 CDS
T07892
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124037875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124037875
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124037875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124037875
NCBI-ProteinID:
XP_046209011
LinkDB
All DBs
Position
LG06:complement(33570969..33608747)
Genome browser
AA seq
2357 aa
AA seq
DB search
MSAVLLQALERAEITKLPKAVQNKLEKLISDLQYEIDLLKSHQEQFRVDSEQQFFEKVQR
LEQSQEQFVTQTEQHHKLREEFTKINEELKSLRENNKKCEINQEKFTSEQVQFSKAKDEL
ESEKRELVHTLERRSQEVDYLSEDLQHLNNKVAEVNTTKMGLQLKLDELESSEVNIKYRE
KRMAQEKELLQDQTAWLNGELKAKSEELLALSRQKGNEILELKCSLENKEDELNRVQDQV
TSLKTSSESLQKQTEDMISKLKEAKEQHASMEEKFRNELNANIKLSNLYKGAAADSESKS
EELSGAVEELHKLLKDAVEANKALEVKLQEMDASRIKEAAELKDSISSLEKELDNANQLL
SDTKLRGAASVLSEETVTTMSPTAAAVAKIVKPGMKLTELYTAYVETQEALELQRVENKR
VNKYLDDIVQEVEAKGPVLKRQRDEHERMQKSVASLSAKLEQAVKEVQRLQKVTDEANKH
SSVLERDNRRSEVQLADMAQQIRVLLIELEEARGNHIAFDEEVSSADISSTSEVITQHLV
TFRGVEDLQQQNQRLLVALRELSDAQEREETETTGTKRSELERSLEKAQAELEALREQRS
HQMQLAESIVRQRDMYRVLLAQATGVSFPQQGAAPEEFSLTSTPHRSPAATPTTAAPTGI
ITMATESTEAVEAKAALRQLQEVFSSYKRERSESDKALAEQTEKLHEQVSDQRSQNAKIS
TQLEFTSKRYEMLQDNVEGYRKDIASLKEKGQKMAAVAQKNEQTVNTLTEDLRVAQEKLN
MAEGRAESLRKERDMLKLVESRLTQEKETMQTQQRGQNMLLTNLKTIQATLERSETDTRQ
RLSAQIEKQEREIGQLQKRLGHDVEQRHLLGRNQDLQLMDAKRQLETQTGLLQKTRDQLS
AAQLEMSSLRLQQGSEEGGRPSLGSQSSPSIPMGLKGLHGSKGDSEDLRGRLRQAETQAE
ELAEQLRTATSSKEQYRAMAQSLEESMDKEKQVMEQARSSMEERVKEAQEQHRHLERKLL
EAEKEKQGLQEEKRKALASVEQQVAELRRSLSSVQADHQEALQRAVVAAAQEQQAILDSQ
EQATLVSEAQDKYEREMMLHAADVEALQAVKAQALQAATLRQQLEERAQRTSAQLLEARV
SWEEQERILKEEMSKVVSRSEELQRQNSLLHEQIQTMSSKIAATLQRQVNESPLNISLTE
QGKSQDQVLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLERELRELQESFSAERER
MQVTAKTLAQHDELMKKTETMSVLMETNKMLREEKERMEQELQQTQAKVRKLELDVLPMQ
ESNAELSEKSGMLQAEKRILEEDIKRWKARTQQLVSQQKDPEEYKRLHFEKEAHLKRIQQ
LTEETGRLKAEVTRSGGSVTSLQSQVQILREGLGKVSSERDALRRDVEAKNLDIQEKFRT
ITQVRKIGRRYKAQYDELKVEHDKMVSEAASTPAQEQEAQQASAQELQGLRDSLGQSETR
TRDLEGQLDNLNKVVAEREAEVRGTQEQASGLQTELTKLRQELQEKASQEDTLRQQMSEK
EEKTRKALVGAKQKINQLIGSKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERE
LRDLREQQERHGEQRDEPPEQGLSKAQEQQRTTEQRGPLKTTPAADRGSASTSEPPTANI
KPTPLGAQGQSKPPVNPGNKSTPRASIRPMITPATVPTPTPTATVMPTTQVENQEAMQSS
EGPLEHVTVYGSASGSVRSTSPSVQTANPVLAVQQTQTTAFVQPTQQQSLPHTEPANQEQ
PLAPVVIEAAPSSQVERPSTSTAVFGTVSAIPGTSSMSKRPREEEQDTSTVTDTDTPQED
PSEPPIPKKLRIIQRVDPEEPEAQEEVLAESSTEGLVPGESHEAPESSQQVVEEYPVLDE
ADEGTASQSVPVELLLSQPTEVTLSYDSPEESPQHDVIVIVTDSESEDEQEDDEEEEPDY
DEEEEEEDDEDEEDGGMGEEGEESNEGSGDGNEAYEDDYTEGADATDPGTETEESLGASD
STQRPDDSQTHGFEGSSSMEAFSSDPTSSAPRMPRSPRRAPHPLPPRLNITQELGPPAQV
QRSMHRQSVGRVPQLTPGMASSGQHYFDDDDRMVPSTPTLVVPHRSDGFAEAIHSPQVSG
VPRFRFGTPEDLISQTSHSDLGQLASQGGLGMYDSPLFLPGHEDESGGRSVPTTPLQVAA
PVSTFTEVPPSDCTEHSSLSVPMVTSSTPGQAGAGGPPPGDERDVLMESEGDRVEVSLEP
VASQAGEMEEPAQPSDDASLPSTSQEPSSSSADTSSTQPKPSRPGPSRQLQRWTENHMRR
GTLPSRGVTGTGRRFAR
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtgctactacaagctctggagcgcgctgagataacgaaactcccgaaagct
gttcaaaataaactggaaaagctcatctctgatctgcaatatgaaatagatctcctcaag
tcacaccaggagcaatttagagtcgatagtgaacaacagttctttgagaaagtgcagcgt
cttgagcagagtcaggaacagtttgtgacccagactgaacagcaccacaaactccgagag
gagttcaccaagatcaatgaagaactcaagagtttgcgggaaaataataaaaagtgtgaa
atcaaccaagaaaagtttacatctgaacaggtccagttctcaaaagccaaagatgaactg
gagtcagagaagagggagcttgtgcatacactggagaggagatctcaggaagtggactat
ctgagtgaggacttgcagcacctcaataacaaagtggcagaagtcaatacaacaaagatg
gggctgcagctcaagctggacgagcttgaatcctcagaggtcaacatcaagtaccgggag
aagcgtatggcgcaggagaaggagctgttgcaggaccagacggcctggctgaatggagag
ctcaaggctaagagtgaggagctgctggccctgtcacgtcagaagggcaacgagatcctg
gagctcaagtgcagccttgagaacaaagaggatgagttgaacagagtccaggaccaagtg
acaagtttaaagacttcaagtgaaagccttcagaagcagactgaagacatgatcagtaaa
ctgaaagaggctaaggagcagcacgctagcatggaggagaagtttaggaatgagctgaat
gccaacataaagctctccaacttgtacaagggagctgctgcagactctgagtccaagagt
gaggagttgagtggggctgtagaggagctgcacaagctgctgaaggatgctgtagaagcg
aacaaggccctggaggtgaaactgcaggagatggatgcctctcggatcaaggaggctgct
gagctgaaggacagtatctccagtctggagaaagaactggacaacgccaaccaacttctg
tccgacaccaagctcagaggtgcagcctcagtgctgtcagaggaaacggtgaccaccatg
tccccaactgcagccgccgtggccaagattgtcaaacctggcatgaagctgactgagttg
tatacggcgtatgtggagacccaggaggcgctggagctgcagcgtgtggagaacaaacgg
gtgaataagtacctggatgacatagtgcaggaggtggaggccaagggtcccgtcctcaaa
cgccagcgggacgaacatgagcgcatgcagaagtctgtggccagcctgtcggccaagctg
gaacaggcagttaaggaggtgcaacgtctgcagaaggtgactgacgaggccaacaagcac
tcttctgtcctggagagagacaaccgtaggtctgaggtgcaactggcagacatggcacag
cagatccgtgtcctactcattgagctggaggaggcacgtggcaaccacatagcattcgat
gaggaggtgagctctgctgacatcagcagcacgtcggaggtcatcacacagcacctggtg
acattccgtggcgtggaggacctccagcagcagaaccagcgcctcctggtggccctccga
gagctcagcgacgcacaggagagagaggagactgagaccacaggcaccaagcgcagtgag
ctggagcggagtctggagaaggcccaggcagagctggaggctctgagggagcagcggagc
caccagatgcagctggctgagtccattgtcaggcagagagacatgtaccgtgtgctgctg
gctcaggccactggagtcagcttccctcagcaaggtgcagcacccgaggaattctccctg
acctccaccccccaccgctccccagctgccacccccaccacagccgcgcccactggaatc
attacaatggcgacagagtcaactgaggcggtggaggccaaggcagccctccgacagttg
caggaggtgttctcctcctataagagggagaggtctgagagtgacaaggccctggcggaa
cagactgagaagctacatgagcaggtgtctgaccagagatcacagaatgccaagatatcc
acccaactggagtttacctccaagaggtatgagatgctgcaggataatgtggagggctac
aggaaggatattgcctctttgaaggagaagggacagaagatggctgctgtagcccagaag
aatgagcaaactgttaacaccttgacagaggacctgagagttgcacaggagaaactcaac
atggcagagggtcgtgctgagagcctcaggaaggagagggatatgctgaagctagtggag
tccagactgacccaggagaaagagaccatgcagacccaacaacgaggacaaaacatgctg
ctcaccaatctcaagaccatacaggccacattggagcgctcagagacggacaccaggcag
cgcctgagcgcccagatagagaagcaggaaagagagatcggccagctgcagaagagactg
gggcacgatgtggagcaacgccacctgctgggcagaaaccaagatttgcagctgatggat
gccaaaaggcagctggagacccagacaggcctgctccagaagaccagggatcagctgagt
gctgcccagctggagatgagctctctcaggctgcagcagggcagtgaagaaggtggccgt
ccatccctgggctcccaaagctccccgtccattcccatgggcctcaaaggactccatggt
tcaaaaggggactctgaggatcttcgtggccgcctgaggcaggccgagacgcaggcagag
gagctggcagagcagttgaggacagccacctccagcaaagagcagtacagagccatggcc
cagagcctagaggagtccatggataaagagaagcaggtgatggagcaggctcggtcctcc
atggaggagcgtgtaaaggaggctcaggagcagcaccgtcatctggagagaaagctcctg
gaggcagagaaggagaagcagggcctacaggaggagaagaggaaagccctggcctccgta
gagcagcaggtggctgagctgaggaggagtctgagcagtgtgcaggcggaccaccaggag
gcgctacagagggcggtggtggcagcagcccaggaacagcaggccatactggacagccag
gagcaggctacgctggtgtcggaggcgcaggataagtacgagcgtgagatgatgcttcac
gctgcagacgtggaggccctccaggcagtgaaggcccaggctctgcaggcagccacgctc
agacagcagctggaggagagggctcagagaacctctgctcagctgctggaggccagagtc
tcctgggaggaacaggagaggatcctcaaggaggagatgtctaaggtggtgtctcgctct
gaggagctgcagaggcaaaacagcctcctccatgaacagattcagaccatgagcagcaag
atagccgccaccctgcagcgccaggtcaacgagagccctctgaacatctccctcactgag
cagggaaagtctcaggaccaggtcctcgagatactcaggtttgtgcgtcgggagaaggag
atagcggagtcacggttcgaggtggcccagggagaaagtcttcgtcacaggctgagagtg
gagcacctggagagagagctgagagaactgcaggagagctttagtgctgagcgggaaagg
atgcaggtgacagctaagaccctggctcagcacgatgagctgatgaagaagactgagacc
atgagtgtcctgatggagaccaacaagatgctgagagaggagaaggagaggatggagcag
gagctgcagcagacacaggctaaagtgcgtaagctggagttagacgtactgcccatgcag
gagtccaacgctgagctgagtgagaagagcggcatgctgcaggcagagaagaggattctg
gaagaggacatcaaacgctggaaggccagaacacagcaactggtgagccagcagaaggac
ccggaggagtacaagcgtctccactttgagaaagaggctcacctcaaacgcatccagcaa
ctcactgaggagacaggcaggctcaaggctgaggtgaccaggagtggcgggtcggtgacg
tccctgcagagccaggtgcagatcctgcgtgaaggcctggggaaggtgagctctgagagg
gatgcgctgaggagggacgtggaggccaagaacctggacatccaggagaagttccgcacc
atcactcaggtcaggaagatcggccggcgctacaaggcccagtatgatgagctcaaggtg
gagcacgacaagatggtgtcagaggcagcatccacaccagcccaggagcaggaggcccag
caagcctcagcccaggagctccagggtctaagagactccctgggacagtctgaaacccgg
actagagacctggagggacagctggataacctcaacaaggtggtggctgagcgcgaggca
gaggtgcgtgggacccaggagcaggcctccgggctgcagacggagctgaccaagttgaga
caggagctgcaggagaaggcctcccaggaggacaccctcagacagcagatgtctgagaag
gaggagaagaccaggaaagccttggtaggggccaagcagaagatcaaccagctcatcggc
tccaaggaccagctgcagaaggagaacgaggaactgaagcaacagagggaggagctggag
gtcagggtcagtgctctgaagtcacagtacgagggccgtctgagccgacaggagcgggag
ctgcgggacctgagggagcagcaggagagacacggggagcagagggacgagcctcctgaa
cagggcctcagcaaggcccaggaacagcagaggaccaccgagcagagaggaccactgaag
accaccccagctgcagacaggggcagcgccagtacctcagagccccccactgccaacatc
aagcccactcctctgggggcccagggccagagcaagcctcctgtcaaccccgggaacaag
tccactccccgggccagcatccggcccatgatcacccccgccactgtgcccacccccact
cctactgctactgtcatgcccacaacacaggtggagaaccaggaagccatgcagtcttct
gagggtccgctggagcatgtgaccgtgtatggcagtgccagcggttcagtacggtcaacc
agccccagcgttcagactgccaacccagtgctggcggtccagcagacccagaccacagcc
ttcgtccaaccaacacagcaacagagcctgccccacactgaaccagccaatcaggagcag
cccctggccccagtcgtcattgaagctgcacccagctcgcaagtggagaggccttcgacg
tccacagctgtgtttgggacagtttcagccatcccagggacatcctccatgtccaagaga
ccgcgtgaggaggagcaggacacctctacggtgactgacacggacaccccccaggaggac
ccatctgaaccccccatccccaagaagctacgcatcatacagagggtggacccagaggag
ccagaggcccaggaggaggtgctggctgagagcagtacagagggattggtgcctggagag
agccacgaggccccagagagcagccagcaggtggtggaggagtacccagtactagacgag
gctgatgaggggacagcgtctcagtctgtccccgtagagctactcctgtcccagcccaca
gaggtcacactctcatacgactcccccgaagaatcccctcagcacgacgtcatcgtcata
gtgactgactcagagagcgaggatgagcaggaggatgacgaggaagaggaaccggactat
gatgaggaggaggaggaggaggatgatgaggatgaagaggatggcgggatgggagaagag
ggagaggagagcaacgaaggtagcggagacggcaacgaggcatacgaagacgactacaca
gagggtgctgacgcgacagacccaggcacggagacagaggagagtctaggagcatcagac
tccactcagcgcccggacgactcccagacacacggctttgagggcagcagcagtatggaa
gccttctccagtgacccaaccagttctgctcccagaatgccccggtcaccacggagggca
ccccacccgctgcccccccgtctcaacatcacccaggaactgggcccccctgctcaggta
cagcgctccatgcatcgccagtctgtaggcagagtccctcagctcacccctgggatggcc
agcagtggacagcactactttgacgatgatgacaggatggtacccagtactcctactctg
gtggtgccacaccgctctgacggctttgcagaagctatccattctccccaggtgtctggt
gttccccgattccggttcggcaccccagaggacctgatatcccagacctcccactctgac
ctgggacagctggcatcacaaggaggtctggggatgtatgatagtcctctgttcctgcca
ggtcatgaggatgagtctgggggccgcagtgttcccacgacacccctacaggtggctgcc
ccagtgtccacattcacagaggtcccgccctctgactgcaccgaacactcctccctgtct
gttcctatggtaaccagctctaccccgggccaggcgggagctggaggaccccctcctggg
gacgaaagagatgtcttaatggagtctgagggagaccgtgtggaggtgtctctggagccg
gtggcgtctcaggcaggggagatggaggaacctgcccagccctcagacgacgcaagcctg
ccttctaccagccaggaaccctcctccagctctgcagacactagtagcactcagcccaaa
ccctctagaccaggacccagccgtcagctccaacgctggacagagaaccatatgaggaga
gggacgttgccatcacggggtgtaactgggacagggaggcgattcgccagatga
DBGET
integrated database retrieval system
