Oncorhynchus gorbuscha (pink salmon): 124037957
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Entry
124037957 CDS
T07892
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124037957 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124037957 (slc24a1)
Transporters [BR:
ogo02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
124037957 (slc24a1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Fimbrillin_C
BUD22
PPP4R2
Tim54
Nop14
Motif
Other DBs
NCBI-GeneID:
124037957
NCBI-ProteinID:
XP_046209261
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Position
LG01:1241522..1307235
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AA seq
716 aa
AA seq
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MYCTQRKRLQLSRVIFLLSGVLLCCLYQLSITSKLSPGPWPHALPQIGEGSGDGKGLTGA
LLEEVALENLREGGHSVDTQEEEIIDLVTTELSDYFSETTTDDITPSTTTEVSSSSSSSS
VTTIRTIVHCIYVDLEPPIQIPTLPNPPPTHLVPNTTQSSPADPGDAPHQKGEYPTDIFS
VEDRRRGWVSLHIFGMMYMFVSLAIVCDEFFVPALGVITDQLAISDDVAGATFMAAGGSA
PELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCAIFSKEMLHLTWWPLFRDVSFYI
IGLIMLIIFFLDNTIMWYESIMLVAGYSSYVCFMKYNVQLEAAFKKQLRKHQHIIHIITV
AVEDEPDKDETAGQDSSPPAPEDKKLLKLKPVLQRGGSSASLHNSTMRNTMYKLMIHTLD
PLGNNKEPAVPAPSATPAPAPAKEEETKKEQPEGQMENKSSAGGSSCGEDDDDDDDDDDD
DDDSDEDSSDEESSDEESSDEDDDEEDEEDDDLDDKPLSLVWPDTRCKQATYLFLLPIVF
PLWLTVPDVRNPVFVITFLGSILWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTS
IPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLLWSSFHGFAPVPVSSNGLFC
AIVLLFLMLLFVIISIAVCKWRMNKMLGSTMFFLYFVFLVLSVLLEDRVIICPVSI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtacccaaaggaagagactgcagctgagccgagtcatattcctcctgtctggt
gttctattgtgttgtctctaccagctgtctatcacctccaagctctccccaggaccctgg
ccccatgccctgccccaaataggtgaggggtctggggatggaaagggactgacaggggcc
ctcctggaggaagttgcattggagaatttaagggaggggggacacagtgttgacacacaa
gaggaggaaattatagatttggtgacaactgaattatccgattatttctctgagacgact
acagatgatatcacaccatccactaccactgaggtctcatcatcatcatcatcatcatca
gtgactacaatccggactatcgttcactgtatatatgtagacctggagcctcccattcag
atccccacccttcccaacccaccacccacccatctagtcccaaacaccacccaatcctcc
cctgccgatccgggggacgcccctcatcagaaaggagagtacccgactgatatcttctcc
gtggaggaccggagacgaggctgggtgtcgctccacatcttcgggatgatgtacatgttc
gtctcactcgccattgtgtgtgacgaattttttgtccctgcgctcggcgtcatcacagac
cagctcgccatctccgacgacgtggctggggcaaccttcatggcggcaggaggctccgct
ccggagctcttcacctctctgattggcgtgttcatctctcatagcaatgtgggcatcggg
acgatcgtggggtcggcagtgttcaatatcctgttcgtcatcggcatgtgtgccatcttc
tccaaggagatgctgcacctcacctggtggcccctgttcagggacgtctccttctatatc
ataggcctgatcatgttgataatcttcttcctggacaacaccatcatgtggtatgagagt
ataatgctggtggctggctacagctcctatgtctgcttcatgaagtacaacgttcagctg
gaggcagcattcaagaagcagctcaggaaacatcagcacatcattcatatcatcactgtg
gctgttgaggatgaacctgataaggacgagacagcaggtcaggatagtagccctcctgcc
ccagaagacaagaaactactaaagttgaaacctgtcctccagagaggaggaagttcagcc
tctcttcacaactccaccatgaggaacaccatgtacaagctgatgattcacacactagac
cccctgggaaacaacaaagaaccagctgtccctgcaccctcagccacccctgctccagcc
ccagccaaggaggaggagacaaagaaggaacagccagagggtcagatggagaacaaatcg
tcagcaggtggttcgtcttgtggtgaggatgatgatgatgatgatgatgatgatgatgat
gatgacgacagtgatgaagatagttctgatgaggaaagttctgatgaggaaagttctgat
gaagatgacgatgaggaagatgaggaagatgatgaccttgatgacaagcctctgtctttg
gtgtggccggacaccagatgtaaacaggccacctatctgttcctcctgcctatagtcttc
cctctgtggctcaccgtgcccgacgtccgtaacccggtttttgtgatcaccttcctgggg
tctatcctatggatcgccatcttctcctacctcatggtgtggtgggcacatcaggtggga
gagaccataggcatctcagaggagatcatgggcctaaccatcctagctgcaggaacgtcc
atccctgacctcatcactagtgttattgtggcccgtaaaggactgggggatatggctgtg
tccagttctgtgggctccaacatcttcgacatcaccatgggcctgccagtcccgtggtta
ttgtggtcgtcgttccatggttttgctccggtgcccgtcagctccaatggtctgttctgt
gccattgtgttgctcttcctcatgctcctcttcgtcatcatcagtattgctgtgtgtaag
tggaggatgaacaagatgctgggatctaccatgttctttctctattttgtcttcctggtg
ctgagtgttctgctagaggacagagttatcatctgtcctgtgtccatctga
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