Oncorhynchus gorbuscha (pink salmon): 124037983
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Entry
124037983 CDS
T07892
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein-like
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124037983
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
124037983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
DUF5119
Motif
Other DBs
NCBI-GeneID:
124037983
NCBI-ProteinID:
XP_046209263
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All DBs
Position
LG06:complement(41726604..41747369)
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AA seq
1049 aa
AA seq
DB search
MVHVYNCHPFASQQIVQAEQEPGLVCCGGGVLFVESAGGCKIEAFQLEAEGCPLICRFAT
MGTVQSILHSEIGDYLVTIEEKNNVTYLRTYTNWRYQVAEKTRVGVRLLGHFLRGSSMRG
APKEQMEIIEIPLFERPLCVACCGVTGDLLVGCPKSLVLFSLKRQALNDKLSILDFERCL
ILHLPGLSPQQVAICAGYIALQAELEVLVVKLERLPGSAPTEKSADKKSQDQCLVPKDMI
TGAEPNNEIEVRKEGLAGHLDQDDFFIFPKHQELLGDRAKDCGVKVSLEWTGMESEARGI
LAITYILYRRFAPDFFQGCSVEDTRLHSLQFHPVFTTNQEVCAGGGRGVEPTCVFCFFSL
PNTGYVYSVRGGVEMVSVYQYPEKAQQAVLTDLFLHIITKNALQCFSVRCSAVAARAEDP
YIDTTMKACPPITMEVCALRIQLFIGLKALCHDRHHIVLLTAADVETREDTERAARRNLN
RKSSSTKHRDPIEMSRGWNLYVVNTVPPLQLYNEMVEYSKKYEETNPLSQSCLHLLSEAH
LLLRATLLDPRVGNPVEQPQSSDQNLARSLGYTATDKIGSTTDRTTDRQELQKAFQESCA
HLGDCFSRFDKRDCHLALPYYKMSGLSVTEVISRNRCLSSSPCGYGKGFLFFLKHSLYEE
TMEELTEETANEVLDIFGVAEPSQLPHVISSPSMVRASPDSGLAHLERLESIGAPSVPLT
LSKAALALRMGDLQLYRQHMDRHTEMLQVYGFIEEHKLLLHGRGHTVVPTPLARHLRDSQ
EGLLVAAMVALHENNKIKLDEADLFFQKLCGNLSGPQGGPQLLVDFWEALLIASSQEAVI
QELLFRLTSVYIDRVTRRDSQGMKALKTADDLINSCSHYGVPYPWVSILTPAHFSIIQDH
QEDLQKLQSLLCGPTLDVSSILPLLEQLPDGDNAGLSVHLLCATKLDRHESSIERLLDRC
PQAIIPYANHELQNNKMTLWWQKLFPELCERTRAAGGENTILLSALKETLVVVAMELNPL
EFLDLLPDDGTAHFFLPHLLECSQRNLMT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtatacaactgccatccattcgcttcccagcaaatcgtgcaagccgaacag
gagcctgggttagtgtgttgtggcgggggtgtcttgtttgtggagtccgcgggaggatgc
aagatcgaggcatttcaactggaagcggaggggtgtcctcttatctgccgcttcgccacc
atggggactgtgcagagcatcctgcacagcgagataggggactacctggtgaccatcgag
gagaagaacaatgtcacctacctccgcacctacaccaactggcgctaccaggtggctgag
aagacacgtgtgggtgtgcgtctgctgggccacttcctgcgtggctcatccatgcgtggg
gctcccaaggagcagatggagatcattgagattccgctgtttgagcgcccactgtgtgta
gcgtgctgtggggtgacaggggacctgctggtgggctgtcctaagagcctggtgctgttc
agtctcaagagacaggccctcaacgataagctctccatcctggactttgagcgttgtctg
atcctccacctcccaggactgtcgccccaacaggtggcgatctgtgcggggtacattgcc
ctgcaggcagagctcgaagtgctggtagtcaagctggagagacttcctggctccgcccct
accgagaagtcagctgacaagaagtcccaggaccaatgtctagtccccaaggatatgatc
actggagcagaacccaacaatgagatagaggtgaggaaagagggtcttgctggtcacctt
gatcaggatgacttcttcatattccctaagcaccaggagctgctgggggacagggctaag
gactgtggggtcaaggtctctctggagtggacaggcatggagagtgaggccaggggtatc
ctcgctatcacctatatcttatacagacgttttgctccagacttcttccaaggctgcagt
gtggaggatacccgcctgcactccctgcagttccaccctgtattcaccactaaccaggaa
gtgtgtgctgggggggggagaggggtggagccgacgtgtgtgttctgtttcttctcgctg
cccaacacgggctacgtgtacagtgtgaggggtggagtggagatggtctcagtctatcag
tatccagagaaagcccagcaggccgtcctcactgacctcttcctccacattatcaccaag
aatgctctccaatgtttctcagtgaggtgttctgcagtggcagccagagctgaggaccct
tacatcgataccaccatgaaggcctgtcctcccatcaccatggaggtgtgtgctttgcgg
atccagctcttcattggtctaaaggctctgtgtcacgatcgccaccacatcgtcctgtta
accgctgcagacgtggagaccagggaggacacagagagggcagctcgcaggaacctgaac
aggaagtcatcctccaccaagcaccgggatcccattgagatgagtcgcggctggaatcta
tatgtggtcaacaccgtccccccactccaactctacaatgagatggtggagtatagtaag
aagtatgaggagaccaaccctctgtctcagagctgtctgcacctgctcagtgaggcccac
ctcctcctgagagccacgctcctggacccccgggtgggaaatccagtggagcagcctcag
agcagtgaccagaacctagcccggtccctgggatatacagcaacagacaaaataggcagc
accactgacagaaccacagacagacaggagctacagaaggccttccaggagagctgtgcc
catttaggagactgcttcagtaggtttgataagcgtgactgccacctggccctgccctac
tataagatgtcaggcctgtctgtgacagaggtgatctccaggaacaggtgtctgtccagc
agcccctgtggctatgggaaggggttcctcttcttcctcaaacactcactctatgaggag
accatggaggagctcactgaggagacagccaacgaggtgctggatatcttcggtgtggcc
gagccgtcccagctcccccatgttatatccagcccctccatggtcagagccagccctgac
agtggcctggcccacctagagcgcctggagtccatcggagccccctctgtacccctcact
ctctccaaggctgccctggccctccgcatgggagacctgcagctctacagacaacacatg
gacagacacacagagatgctgcaggtatatgggttcatcgaggagcacaaactgctgctg
catggcagagggcacacggtggtgcccacccccctggcacgccacctcagggacagccag
gaaggtctgctggtagcagccatggttgcgctacacgagaataacaagatcaaactggac
gaggctgacctcttcttccagaagctttgtgggaacctgtcagggccccagggaggccct
cagctgctggtggacttctgggaggccctgctgatagcctcatcacaggaagctgtcatc
caggagctgctgttccgcctcacctctgtctacattgaccgcgtcacgcgccgagacagc
caaggcatgaaagcactcaagaccgcagacgacctgatcaactcatgttctcactatggt
gtgccgtatccctgggtcagcatcctgactccagctcacttcagtatcattcaagatcac
caggaggacctccagaaactacagtccctgctgtgcggtcccaccctggatgtgtcgtcc
atcctgcccctgttagagcagctgccagacggggacaacgcagggctaagtgtgcacttg
ctctgtgccaccaagctggaccgccacgagagctccatcgagaggcttctagaccgatgt
cctcaggcaatcatcccctacgctaatcacgagctgcagaataacaaaatgactctgtgg
tggcagaaactgtttcctgagctgtgtgagagaaccagagcagcagggggagagaacacc
atcttactgtctgcactcaaagaaacgctggtggtggttgccatggagctgaatccactg
gagtttctggacctgttgcctgatgacgggacggcacacttcttcctgcctcacctgctg
gagtgcagccagagaaatctcatgacgtaa
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