Oncorhynchus gorbuscha (pink salmon): 124038026
Help
Entry
124038026 CDS
T07892
Name
(RefSeq) VWFA and cache domain-containing protein 1
KO
K28855
VWFA and cache domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124038026
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124038026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CACHD1_mid
CACHD1_C
MCP-like_PDC_1
CACHD1_middle
dCache_1
VWA_N
Motif
Other DBs
NCBI-GeneID:
124038026
NCBI-ProteinID:
XP_046209346
LinkDB
All DBs
Position
LG06:46925960..47037776
Genome browser
AA seq
1293 aa
AA seq
DB search
MARRVGGEGPVILTLIPSTVWDKNSRLHWCNFMAVFWSSVAVLSLLCCGFCGAETEFSIL
EEAQVLAVQMKKLSSQELGVFTMQRIFNSFVYTEKTSNGETEVQQLAKKIREKFNRYLDV
VNRNKQVVEASYTAHLTSPLTAIQDCCSIPPSMMEFHGNFNTNVSKTICCDRLSPTVNSR
AFNPGRDLNSVLADNLKSNPGIKWQYFSSEEGIFTVFPAHKFHCKGNYEHRCRPVYVSAV
RPQSKHIVVIIDHGVTITDTQLQIARDAALVVLSSVDEHDKVSILSSAEAVRSCSLDPCY
KSYLSPATSETKRKMSTFVNNLKASDSPTLHALGFQKAFQLLRNTSNITRQLTNTDMVII
YLSSGITSRDASEHEKRDTLRVVKEENRHLNNSVMILTYALMNEGVTGLKELAFLRDLAE
QNSLKYGVPDRSALPVVKGSMMVLNQLSNLETTVGRFYINLPNRMIDLARFSLSYQDAMG
DGFIMTASRPCYFGNLLLGVVGVDVNLAYILEDVTYHQDSLASYTFLIDNKGYTLMHPSL
TRPYLMTEPPLHTDIIHYENIPGFPVVRDNILRLPLGSQVIAVPTNSSLSWHTNRLRDPS
REAYNVSYAWKLVQDTSFILCIVYVQPEIPVKHLKNLNTAPSSKLLYHRLDLLGQPSSCL
HFKQLATVESPTVMLSAGSFSSPYEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKSSVR
NEVMATSHVTDEWMTLMEMSSLNCYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYQH
AVANPGLITFTGPYLDVGGAGYVVTISHTIHASSSQMAPGYAVAVMGIDFTLRYLYKVLL
DLLPICNQDKGNKIRCFIMEDRGYLVAHPTLIDPKGHAPAEQQHITHKEPLVANDILNHP
NFVKKNLCNSFSDRTVQRFYKFNSSIIGDLTNLVHGSHCSKYRLTRIPGTNAFAGIVNET
CDSLAFCACSTVDRLCLNCHRMEQNECECPCECPLEVNECTGNLSYAENRNPSCEVHQEP
LSLTVMDSSLQDTLPQCINTRCSQRFTSSDCFGVLDCEWCMVDSDGKTHLDKPYCALQKE
CFGGIVGAKSPYMDGMGMLDEEVVSLNMMKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIH
RRSHQHMSPLAAQEMSVRMSNLDNERDERDEDSHEDRGIISNTRFIAAVIERHTHSPERR
RRYWGRSGTESDHGYSTMSPQEDSENPPCNNDPLSAGVDVGNHDDDLDLDTPPQTAALLS
HKFHPYRHPPYHHPLHTHRLQAAVTVHSVDAEC
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcgagtagggggagaaggacccgtgattttaacactaattccatccacggtt
tgggataagaactcgagactccactggtgtaacttcatggctgttttctggagctctgtg
gcagtattgtcgcttctatgttgtggattttgtggcgctgaaactgagttttcgatcttg
gaggaggcacaagttttagccgtacaaatgaaaaaactgtcctcgcaggagcttggagtc
ttcaccatgcagagaatcttcaactcgtttgtgtacacagagaagacctcaaacggagag
acagaagtacagcagcttgcgaagaagatccgcgagaagtttaaccgttacctggacgtg
gtgaacaggaacaagcaggtggtggaggcatcctacacggcccacctgacctcccccctc
accgccatccaagactgctgcagcatccccccctccatgatggagttccacggtaacttc
aacaccaacgtgtccaagaccatctgctgtgaccggctgtcccccaccgtcaacagtcga
gcctttaaccctggacgggacctcaactcagtgttggcagataacctgaagtccaacccg
ggcatcaagtggcagtacttcagctcagaggagggcatcttcactgtgttccccgcccac
aagttccactgcaagggcaactacgagcaccgctgcaggccagtgtacgtgtcggcggtg
cggccccaatcgaaacacatcgtggtgatcatcgatcacggcgtgaccattacagacaca
cagctgcagatcgccagagacgctgcgctcgtcgtcctcagctccgtcgacgagcatgac
aaggtctcgatcctgtcctcagcggaggcggtgcggtcctgttcgctggacccgtgctat
aagagctacctgtctcctgccaccagcgagaccaagaggaagatgagcaccttcgtcaac
aacctcaaggcttccgacagtcctaccctgcacgcactgggcttccaaaaggccttccag
ctgctccggaacaccagcaatatcacccgccaactcaccaatacggacatggtgatcatc
tacctgtcgtctggcatcacgtcccgagacgcgtcggagcacgagaagagggacaccctg
cgcgtggtcaaagaggagaaccgtcacctcaacaactcagtcatgatcctcacctacgcc
ctcatgaacgagggcgtgaccggtctgaaggagctggcgttcctgcgtgacctggccgag
cagaactcgctgaagtatggcgtgcccgaccgctcggcgctgccggtggtgaaagggagc
atgatggtcctgaaccagctcagtaatctggagaccaccgtgggacgcttctacatcaac
ctgcccaaccgcatgattgacctggcccgcttcagcctgtcctaccaggacgccatggga
gacggtttcatcatgacggcgagccggccatgttactttggcaacctgttgctaggcgtg
gtgggagtagacgtgaacctggcctacattctagaggacgtcacctaccaccaggattcc
ttggcctcctacaccttcctcatagacaacaaaggttacaccctgatgcacccgtccctc
acacggccctacctgatgaccgagcctccgctgcacactgatatcatccactatgaaaac
atcccagggttccccgtagtacgggacaacatactccgtctgcccctgggcagtcaggtg
atagctgtgcccaccaactcctctctgtcctggcacaccaaccggctacgagaccccagc
agggaggcctacaacgtcagctacgcatggaaactggtccaggacacatcgttcatcctg
tgcatagtgtacgtccagccagagatcccagtgaaacacctaaagaacctaaacacagct
cccagctccaagctgctctatcaccgcctggacctgctgggtcagccctcctcctgtctg
cacttcaaacagctggccaccgtcgagagccctacggtgatgctgtctgcagggagtttc
tcctctccctacgagcacctcagtcagccagagaccaaacgcatggtggaacactacaca
gcctacctcagtgacaacacacgcctcatagccaaccccggccttaagtcgtcggtcagg
aacgaggtgatggcgaccagtcacgtcacagatgaatggatgacactcatggagatgagt
agcctcaactgctacattgtgcgccgttacatagcaacgcccaacggggtgctgcggatt
taccccggctcgctaatggacaaagccttcgacccaacccggagacaatggtaccagcac
gctgtagccaacccaggcctcatcaccttcactgggccttacctggatgtgggcggggct
ggctacgtggtcaccatcagccacaccatccacgcctcaagttctcagatggccccaggg
tatgcggtagccgtgatgggcatagacttcaccctgcgttacttgtacaaggttctgctg
gacctgctacccatctgcaaccaggacaagggtaacaagatccggtgtttcatcatggag
gacaggggttacttggtggcccaccccaccctcatcgaccctaaaggccacgcccccgcc
gaacagcagcacatcacccacaaggaaccgctggtggccaacgacatcttgaaccacccc
aactttgtcaagaagaacctctgcaacagcttcagtgaccgcacggtccagcgcttctac
aagttcaacagcagtatcattggcgacctgacgaacctggtccacgggagccactgctcc
aagtaccgtctgacccgtatcccagggaccaacgctttcgcgggcatcgtcaacgagacg
tgcgactcgctggctttctgtgcctgcagcaccgtggaccgcctctgtctcaactgtcac
aggatggagcagaatgagtgtgagtgtccatgtgagtgccccctggaggtcaacgagtgt
actggcaacctcagctacgctgaaaacaggaaccccagctgcgaggtgcaccaggagccc
ctgtctctgacggtgatggactccagtctgcaggacaccctgccccagtgtatcaacacc
cgttgcagccaacgcttcaccagcagtgactgttttggcgtgctggactgtgagtggtgc
atggtggacagtgatgggaagacccacctggacaagccttactgtgccctgcagaaagag
tgcttcgggggcatcgtgggggccaagagcccttacatggacggcatggggatgctggat
gaagaggtagtgtctctgaacatgatgaagagtgccccggttgggccggttgccgggggt
attatgggctgcatcatggtgctggtgttggctgtctacgcctacagacaccagatccac
cgacgctcacatcaacacatgtcccctctggctgcacaggagatgtccgtcaggatgtct
aacctggataacgagagagacgagcgagacgaggacagccacgaagacagggggatcatc
agcaacacccggttcatcgcggcggtgatcgagagacacacccacagccctgaacgccgg
aggaggtactggggacgatcagggacggagagtgaccacggctacagcaccatgagtcct
caggaggacagcgagaaccctccctgcaacaacgaccccctgtcggccggcgtggacgtg
ggtaaccacgacgatgacctggacctggacacgccccctcagacggcggcgctgctcagc
cacaagttccacccgtaccgccacccgccttaccaccacccgctccacacgcaccgcctg
caggcggccgtcaccgtgcacagtgtggacgcagagtgctga
DBGET
integrated database retrieval system
