Oncorhynchus gorbuscha (pink salmon): 124038045
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Entry
124038045 CDS
T07892
Name
(RefSeq) rho GTPase-activating protein SYDE2-like isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124038045
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124038045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C2
Motif
Other DBs
NCBI-GeneID:
124038045
NCBI-ProteinID:
XP_046209383
LinkDB
All DBs
Position
LG06:48637715..48724680
Genome browser
AA seq
1704 aa
AA seq
DB search
MGRIPNGYFSRQVQQEQIGKPHEQRKHFGPIPRQYGAGDSIGFGGNSPNYNIINHRRPGV
VDREGVKLTGGPYPASKSNGTNVCFDAYLKTRVSDGQADSCHQTVYNYKAENAQRSIHYL
KGKAKLHPGHNQILETNVTTNWVQMYPLGALCGHHPTGSYTEENIVIRDMESYRSSPEFT
GDNNSVTHLQSPTFFPTELELCDVNVASHFICAREGTLRNNSIDSEDDDYYDNEILPFYI
SESVGPSDRKGSDEVESIESGIDVPKGHVISDSVQETDKLHSQLKEAYYLLINATHDISF
DGQVSVNGFKDQKSMWSSFKHVGSDALSSGEYSAQQVSDMDSLPLCLLSENNTNLICKSL
VNLSASRIRPPLLRSTSDGIIKHSNGVRNGPCIQGLGSQSPLVVGACEDGDGANRPKAVG
ASDPFEKQPGYDGGTSSDGLLHDTGDNGKSNESRGSVNSLTGPSDNAEPQQGGNNNQDRE
MSGWTLDQGGSAKPHGVTVNKMQEWMHKGRLLSSEMKQRIAGSTPQPHGAHGGLDRAPRP
RQGQVSSGPGGSKPEALTTRVDRAQAAAVVSCQGQATQKSALIENDHSSFSNALDVGVGK
AVETSLWRPPLNTITVSKKRNWLQQSSGRPCHATDEPQYLLGAEEYNGHGKAPLPPLSPS
PENLNPPGPTLSHPFHLHLPLVRMGHACVAPRSRCVEPTEENDADDEGEIWYNPIPEDEE
PELHHSHRPTPTPQVRLMVQTRPQDPHFPQTQRRPSRGEEVGVLRALEGCSHNLEGVGES
MGGGGGERSQQGIAMRCMGPSLHLQRQMLLACKPQEWPTISSRATATAEAPDLAIPDFPP
PSGLNPAKKGSSLNWSFPDRIKSPRTVRKLSMKMKKLPELSRKLSVKGTPSKNNNSSCNG
ASESSILKTRTQCPKNNCGSEPGPAPPRLSPRGGQGAVASHNVITRYHLDSSVSTQQSYS
KKKKSSGTSKSASKGGYLSDGDSPELVTKSGKHGSSEAKGGNGKEKDPATGGGERTGAGG
VTGGSGNPRLHGTELDIDAFRHYAFTEQPKCTQYISGLMSLHFYGAEDLKPPRFDSRDVY
CAIQVDSVNKARTALLTCRTTFLDMDHTFNIELENAQHLKLVVFSWDPTPKKNRVCCYGT
VVLPALFRVTRSHQLAVKLEPRGLIYVKLNLMEQWQNSLDGGYNGDREPQMFGVEAWRVV
VRENTGLMLPLLIEKCITEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSLGVELCENT
YPDTNVITGVLKDYLRELPYPLITKHLYETVLDSMAQRPLRIGAGGCENDPADTEHTVSL
LENLPEVERFTLRRLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLSQRQEASCHSNRVFI
DSEELASALHFKKHIEVLHYLLQLWPVMDQRDKTSSPIPGPPGPADQLAVPSLRRRKERP
QVLTLSDAEMAGVLRPRPGRLDSPSNRYAGDWSRCGQSYFPPPRSREEKDYADVPSEDME
VTEEELEGVEDKGQEGGEEQGQEGGEEQGQEGGEEQGQEGGEEQGQEGGEEQGQEGGEDK
GQEGGEEQGQEWLLDGGQAEPATAEQEPPLPEEVMEGPVEVEKEEREAEEREAERRVEER
DGSSGGQPSDNRVCDDDDEDDDDDKRILHLHLPKEHTYQAYMKIQELSPVLSNKVNLRDL
QESIDTLIGNLERELNKNKLNVGY
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaatccctaacggctacttctcgagacaagtacaacaagaacagatcgggaaa
ccgcacgaacagagaaaacactttggccccattccgcgacagtacggcgcaggggactcc
atagggttcggtggcaatagtcctaattataacattataaaccacagacggcctggtgtt
gtagatcgagagggagttaagctgacaggtggcccctatcctgcttcaaagagtaatggg
acaaatgtctgctttgacgcgtatctaaagactcgagtcagcgacgggcaggcagactcc
tgccatcaaactgtgtacaactacaaggcagagaacgcgcagaggtcaatacattattta
aaaggcaaggcgaaattgcatcctggccacaaccaaatattggaaacaaacgttacaact
aactgggtgcaaatgtatccgctgggtgccctatgtggacatcatccgaccggtagttac
acggaggaaaacattgttattagagacatggagagctaccggagctcgcccgaatttacc
ggggacaacaacagcgtgacacatttgcagagccccacattcttccccactgaattggag
ctatgcgacgtaaacgtggcttcccatttcatatgcgctagagagggaacactccgaaac
aactcgatagatagcgaggatgacgattattatgataacgaaattctccccttttacata
tcggagtcagtaggaccaagtgacagaaagggctctgatgaagtagaaagcatagagtcg
ggaatagatgttccaaaaggacatgtcatcagtgacagtgtgcaggagacagacaaacta
catagccagttgaaagaggcgtattacctgcttataaacgccacgcatgatattagtttt
gatggtcaggtcagtgtcaatggatttaaagatcaaaagagcatgtggtcatccttcaag
cacgtgggcagtgatgctttgtcatctggagagtacagtgcccaacaggtgtctgacatg
gactcgctcccattgtgcctgctgagtgaaaataatactaatttaatttgcaagagcctt
gtaaacctatctgctagcaggattaggccccccttactgcgatccactagtgacggaatt
atcaaacactccaatggcgtgcgcaatgggccctgtatccagggcctcggttcccaaagc
cctttggttgttggggcctgtgaagatggggatggagcaaataggccgaaggctgttgga
gcctctgacccatttgagaaacagcctggctacgatggtggcacgagcagcgacggcctg
ctccatgacaccggtgacaatggcaagtcaaatgagagtagaggctcggtcaacagcctt
accgggccatccgacaatgcagaaccccagcagggtggtaacaacaaccaggacagagag
atgagcggttggactctggaccagggaggctctgccaagccccacggtgtcaccgtcaac
aagatgcaggagtggatgcacaaaggccgcctactgtcatctgagatgaagcagcgcatc
gcagggtccacgccccaaccccatggtgctcatggcggcctggatagggcaccacggccc
agacagggccaggtcagctcagggccaggtggttctaaaccagaagccctgacgaccaga
gttgacagggctcaagcagccgcagtggtctcatgccagggccaggcaacacagaagtca
gctctgatagaaaatgaccactcctccttctccaacgcccttgatgtgggcgtgggcaag
gctgtcgaaacgtcgctatggagacccccgctcaacaccatcaccgtctccaagaaacgt
aactggctccagcagagctctgggaggccgtgtcacgccacagatgaaccccagtacctt
ctgggagcagaggaatacaatggacacggaaaagctccactcccccctcttagcccctcc
ccagagaacctaaaccctcccgggccaaccctatcccacccattccacctacacctgccc
ctcgttagaatgggccacgcctgtgtggcgcctcgttccaggtgtgtggaaccgactgag
gagaatgatgcggatgatgagggggagatctggtataaccccatccctgaggatgaggaa
ccagagctgcatcacagccacagacccactcccaccccccaggtcaggctgatggtgcag
acacggccccaggatcctcacttcccccagacccagaggaggcccagcaggggagaggag
gttggggtcctgcgggccctggagggatgcagccataacctggagggtgtgggggagagc
atgggtggcggaggtggagagcggagtcagcaggggattgccatgcgttgcatggggccg
tctctacatctgcaaagacagatgctgctcgcgtgcaaacctcaggagtggccaaccatt
tccagcagagccacagctacagcagaagcccctgacctggccatccctgacttcccgccg
ccctcaggcctcaaccctgccaaaaagggaagctccctcaactggtcattcccggacagg
atcaagtctccacgcactgtcaggaaactctccatgaagatgaagaagcttccagaactc
agccgcaagctcagcgtaaaagggacccctagcaaaaacaacaacagcagctgcaacgga
gccagcgagagcagcatcttaaagacaaggacccagtgtcccaaaaacaattgcgggtca
gaaccaggcccagctcctcccaggttgtccccaaggggtgggcagggggcggtggctagc
cataatgtgatcacgaggtatcacctggacagcagtgtgtcgacgcaacaaagctacagt
aagaagaagaagagcagcgggacctccaagtcggctagcaaggggggctacctcagtgac
ggggactccccagaactggtgaccaagtctgggaagcacgggtcctcagaggccaaggga
ggcaatgggaaggagaaagacccagccactggaggaggagagagaacaggagcaggagga
gtaacgggaggaagtggcaaccccaggctgcacggcacagaactagacattgacgcgttc
cgccactacgccttcacagaacagcccaagtgcacccaatacatctctggcctgatgagc
ctgcacttctacggcgccgaggacctcaagccaccacgcttcgactcccgagacgtctac
tgtgccatccaggtggactcggtcaacaaggcgcgcactgccctgctcacctgtcggacc
accttcctagacatggaccacaccttcaacattgagctggagaacgcccagcacctgaaa
ctagtggtgttcagctgggaccccacacccaagaagaaccgggtgtgctgttacggcaca
gtggtgttaccggcactcttcagggtgaccaggagtcatcagctggcggtgaagctggag
cctcgaggcctgatctacgtgaagctgaacctgatggagcagtggcagaactccctggat
ggaggctacaatggggaccgggagccacagatgtttggggtggaggcctggagggtggtt
gtgagggaaaacacaggactcatgctgcccctgctcatcgagaagtgcatcacggagatc
gagaagagaggctgccaggttgtgggcctctaccgtctgtgtggctcagcagcagtaaag
aaggagctgcgggaggcctttgagagggacagcctaggagtggagctctgtgaaaacacc
taccctgacaccaacgtcatcacaggtgttctgaaggactacctgcgtgagttgccctac
ccccttatcactaagcacttgtatgagactgtgttggactctatggctcagagacctctg
cgtatcggagcaggaggatgtgaaaatgacccggcagacacagaacacaccgtcagtctc
ctggagaacctgccagaggtggagaggttcaccctgcggaggctgctggaccatctgaag
ctggtggcgtcataccatgaggtcaacaagatgacgtgtcagaacctggcggtatgcttc
ggccccgtgctgctcagccaacgccaggaggccagctgtcatagcaaccgggtcttcatc
gactcggaggagctggccagcgccctacacttcaagaaacatatcgaagtgctacactac
ctgctgcagctatggccagtgatggaccaacgtgacaagacctcgtcccccatcccaggg
ccccccggcccagcagaccagctggccgttccctccctgcgtcggaggaaggagcgcccc
caggtgctgaccttgagcgatgcagagatggccggggtgctgcggcccaggccgggccgt
ctggacagccctagcaaccgttacgccggggactggagccgctgtggacagagctacttc
ccccctcctcggtcccgggaggaaaaggactatgctgatgttccttctgaggatatggag
gtcactgaagaggaactagagggggtagaggacaagggacaggaaggaggagaggagcag
ggacaggaaggaggagaggagcagggacaggaaggaggagaggagcagggacaggaagga
ggagaggagcagggacaggaaggaggagaggagcagggacaggaaggaggagaggacaag
ggacaggaaggaggagaggagcagggacaggaatggttactggacgggggacaggcagag
ccagccacagccgaacaggagcccccgttacccgaggaggtgatggaaggacctgtagaa
gtggagaaagaggagagggaagcagaggagagggaagcagagaggagagtggaggagcgt
gatggctccagtggtggtcagccgtcagacaacagggtgtgtgatgatgatgatgaggat
gatgatgatgataagcgcatcctgcacctccacctccccaaagagcacacgtaccaggcc
tacatgaagatccaggaactcagccccgtgctcagcaacaaggtcaacctgcgagacctg
caggagagcatcgacacgcttataggcaacctggagagagaactcaacaagaacaagctc
aacgtcggctactga
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integrated database retrieval system
