Oncorhynchus gorbuscha (pink salmon): 124038114
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Entry
124038114 CDS
T07892
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124038114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124038114
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
124038114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124038114
NCBI-ProteinID:
XP_046209541
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All DBs
Position
LG06:complement(55610236..55626661)
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AA seq
318 aa
AA seq
DB search
MPLQVVVQGPGPWGFRLVGGKDFEQPLTISRVTNGSRAAQANLCIGDQILAIDGEPTENM
SHLQAQNKVKGCLEEIVLSIDRSESKMWSPLSSEEGKTNSYKMNLASKPQEVKHIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNATVDGVKTIGTAANEPSTVSDPSGIL
PPIVADSEVYKMLKENQEADEPPRQSASFKVLQDILESDPDKTSGFKSVKAPATKIVSTV
RHADKLPICEKCGSGIVGVVVKLQDKFRHPECYACSDCDLNLKQKGHFFVEDQIYCEKHA
RERVTPPEGYDVVTVFPK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacaagttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaagattttgaacaacccttgactatctcgcgggtcactaatggcagtagggctgcacag
gccaatctgtgtatcggggatcagatcctggccatagatggagagcccactgagaacatg
tctcacctgcaggcacagaacaaggtcaagggctgcttagaggaaatagtcctttctatt
gacagatctgaatctaaaatgtggtcaccgctctcttctgaggaaggaaagaccaactct
tacaagatgaatcttgcatctaagccgcaggaggtgaaacacataggttccgcccacaac
aggagcgccctgccattcgctgggttcggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctcagagaatatcaaggacttcaacgcgactgtggatggcgtg
aaaaccatcggcactgctgctaatgagcccagcaccgtctcagatccgtccggtattcta
ccaccaatagtggcagactctgaggtctacaaaatgctgaaggaaaaccaagaggctgat
gagcctcctcgacagtcagcttcattcaaagtgctgcaggatattctggagtcagatcct
gataagacctctggttttaagagtgtgaaagcgcctgccacaaaaattgtttcaacagtg
agacatgcagacaagttaccaatctgtgaaaaatgtggatcagggattgtgggggtggta
gtcaagttacaggacaagttccgtcaccccgagtgctacgcctgctcagattgcgacctc
aacctgaaacagaagggacattttttcgtggaggaccagatctactgtgagaaacacgca
cgtgagcgagtgactccacccgaaggctatgatgtggtcactgtctttcccaagtag
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