Oncorhynchus gorbuscha (pink salmon): 124038139
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Entry
124038139 CDS
T07892
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124038139 (btaf1)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124038139 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_MROH2B_C
HEAT_2
HEAT_GCN1
HEAT_GCN1_C
TOR1L1_N
HEAT_EZ
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
124038139
NCBI-ProteinID:
XP_046209596
LinkDB
All DBs
Position
LG06:complement(56986884..57050975)
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AA seq
1860 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKTAAQQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWSPSPKPKEESSADFSPEDSYSDRLSFYRFDISRLLKHGASLLGS
AGAEFEVQDDKSGEVDPKERLTRQRKLLQRKLGLDIGAAIGMDTMELFNDEDLDTQYITP
SGPKAQGQGGTGSGPCSSSHNHVPMQAAEIIDSEFRPGMSNRQKNKAKRMAKLVAKQRSK
DMDPNERSNDSFDGEPEEKRRKTTNVVIDQPAMEHKVLIDNVPDNSSLLEETQEWPLESF
CEELCNDLFNPSWEIRHGAGTGLREILKSQGAGGGKLVECTAEQMALQHQEWLEDVVIRL
LCVFALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNDSGVAMTVDILLKLLTEDQWEVR
HGGLLGIKYALAVRKDLISAMLPRVLPAITEGLQDLDDDVRAVAAAALIPVVDGFVQLLP
NKVPFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFL
RHTISSVRRAALETLFTLLSKADQSCALWLNQVLQDMLRHIFQSCILESNQEILDLIQKV
WTELLRQAPQQYVVAASCPWMGAWLCLMMQASHIPIDINMLLEVKARCKEKAGGKPRQGA
LVQVKETVQEYIAGAETVTEDPITRDYVVTRARLMAAKLLGALCRCMCDPQVNSSSQDIR
PAESLGQLLLFHLNSKSALQRIAVALVLCEWAAVQKECQVVSALVQPRLLAILSEQLYYD
EIAIPFTRMQNECKQLISLLADAQIDVHDRLNCSVFTIDQASELVTTIFTESTVGLNMKS
KQFQPLDGKRQQAQSTVGETSVEWQQLHLRVHMFTACAVVNLQALPDKLNPVVRPLMEAA
KREENTLVQGYAASFIAKLLQQCAGRQPCPNSKIVKNLCSSVCVDPLLTPSSACPVSTTQ
ETAKAGMSEKECMHHVVNKTKGIITLYRHQRAAFAITSKRGPTPKTAKTPTTELPPGSTI
TTDTDENKKTCLVQRRGAEFSLMTIARHFGQELTRSLPYLWESMVGPLRAVVEDNEGIDW
KLRMEKGDAAAQDLVNSLQVLEVTAGAMAPELKPLLLEHLPHLFTCLQHPYTAVRHMAAR
CVGVLSKIATMETMHLFLERVLPWLGCIEDSTKQEGAIEAMACVMEQLDVDIVPYIVLLV
VPVLGRMSDPSDSVRFMATQCFATLIRLLPLEAGIPDPPTMSDDLIRQKARERHFLEQLL
DSRKLENYKIPVPIQAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGD
HYLRAQEYAKTKAADSTPLPSLVVCPPTLTGHWVDEVGKFCTKEYLNPLHYTGPPTERAR
LQHQVKKHNLVVASFDVVRNDIDFFRNVKFNYCILDEGHVIKNGKTKLSKAIKQLAANFR
VILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLA
MEALHRQVLPFLLRRMKKDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVGVEDTI
STASTQEEEKPKLKATGHVFQALQYLRKLCNHPGLVLLPQHPEYKRITDQLAAQHSSLRD
IQHSPKLSALKQLLLDCGLGSSGSAEGTESVVAQHRVLIFCQLKSMLDIVEHDLLKLQLP
TVTYLRLDGSVQASLRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANAVISQENASLQSMG
TDQLLNLFTLDKDGKDDKGELSSSGGKASIKNVLDGLGDLWDQLQYDTEYNLDSFMHTLH
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttcaaggcttgatcgtctttttatcctgcttgacactggaactactccggtg
acgaggaagactgctgcccaacagctgggagatgtggtcaaactccacccacatgagctc
aacaacctgttgtcgaaggtattgacatacctgagaagtccaaactgggacacgcgtatt
gctgcgggtcaagcagtggaggccattgtgaagaatatcccagagtggagcccatcaccc
aagcccaaagaagagtcctctgcagacttttccccggaggactcctactctgaccgtttg
agtttctaccgattcgacatctcccgcctcctcaaacatggtgcttctctactgggttct
gccggcgctgagtttgaggtccaggatgacaagtctggtgaagtggaccctaaggagcgt
ctcacccgccagaggaagctgctgcagaggaagctgggactggacataggtgccgcaatc
ggcatggacacgatggagctgttcaatgatgaggacctggacacccagtacatcacgccc
agtggccctaaggcccagggacagggagggacgggctctggaccctgctccagctcccac
aaccacgtgcccatgcaggcggcggagataatagactcagagtttcgacctggcatgagc
aaccgacagaagaacaaggctaagaggatggccaagctcgtggccaagcagcgatccaaa
gacatggatcccaacgagagaagtaatgacagttttgatggggagcccgaggagaagcga
aggaaaactaccaacgtagtcatcgatcaaccggcaatggagcataaagtcttaatcgat
aatgttccagataactccagcctcttagaagagacccaggagtggcccctagagagcttc
tgtgaggagctctgtaacgacctcttcaacccctcatgggagattcgtcacggtgcaggc
acaggcctcagggagatcctcaagtctcaaggtgctggaggagggaagctggtggaatgc
actgcagaacagatggcgctgcagcaccaggagtggctggaggatgtggttatcaggctg
ctctgtgtctttgctctggaccgttttggagactttgtctctgatgaggtggtagctccg
gtcagagagacttgtgcccagacactgggcgtggccttgcgccacatgaatgacagcggc
gttgccatgactgtagacatcttgctgaagctgctgacggaggaccagtgggaggtccgg
cacggaggtcttctgggcatcaagtatgccctggcagtccgaaaggacctgatctccgct
atgcttccgcgggtgctccctgccatcacagaggggctgcaggacctggatgatgacgtc
agagcggtggcagccgcagccctcatccctgtggtggacggctttgtacagctactcccc
aacaaggtcccgttcatagtgaacaccctgtgggatgctctcctggagctggatgacctg
actgcctccaccaacagcatcatgaccctactgtcctcgctgctcacctacccccaggtc
cgacagtgcagcatgcagcagtccctaacggtccttgtccctcgggtctggccattcctt
agacacaccatatcatcagtcagacgggccgcattagagaccctctttaccttactgtcc
aaagccgaccagagctgcgcgctatggctcaaccaggtcctgcaggacatgctccgacac
atcttccagtcttgcatcctggagagcaatcaggagatcctggacctcatccaaaaggtg
tggacagagctgctgcgccaggcccctcagcagtacgtggtggcagccagctgtccctgg
atgggcgcctggctctgcctgatgatgcaagcctctcacatccccatagacatcaacatg
ctgctggaagtcaaggctcgctgcaaggagaaggctggcggtaagcctcgccagggagcc
ttggttcaggtgaaggagactgttcaggagtatatcgctggggcggaaactgtgaccgag
gacccaattacgagagactatgtggtgacacgggctcgcctcatggccgcaaaactgttg
ggggccttgtgtcggtgtatgtgcgacccgcaggtcaactcctcctcacaggacatccga
ccggctgagtcgctgggccagctgctcctcttccacctcaactccaagtctgccctgcag
cgcatcgctgtggccctggtcctctgtgagtgggctgctgtgcagaaggagtgtcaggtg
gtgtcagccttggtccagcctcgcctcttagccatcctgtcagagcagctgtactacgac
gagatcgccattcccttcacacgcatgcagaacgagtgtaagcagctaatctccctgctg
gccgacgctcagatcgacgtgcacgaccgcctcaactgcagtgttttcaccatcgaccag
gccagcgaactggtgaccaccatcttcaccgagtccaccgtgggtctgaacatgaagtcc
aaacagtttcagccactggatggcaagcgtcagcaggcccagtccacggtgggcgagacc
agtgtagagtggcagcagctgcacctgcgagtccacatgttcaccgcctgcgccgtggtc
aacctgcaggcgctgccagacaagctgaacccggtggtgcgtcctctgatggaggcggct
aagcgggaggagaataccctggtgcagggctacgccgcctccttcattgcgaagctgctg
cagcagtgtgctggtaggcagccatgtcccaattccaagatcgtcaagaacctgtgttca
tcggtctgcgtggaccccctgctcacgccctcctcggcctgtccggtgtccacgactcag
gagactgctaaagctggcatgtcggagaaagaatgcatgcaccacgtggtcaataagacc
aagggcatcatcaccctgtaccgccaccagagggcagcatttgccatcaccagcaaaagg
ggccccacccccaaaaccgccaagacacccaccactgaactgccccccggcagcaccatc
accacagacactgatgagaataaaaaaacctgtctcgtccagagaagaggcgcagagttc
tctctgatgacgattgccaggcactttggccaggagctgacaaggtcactgccctacctg
tgggagtccatggtgggacctctgagggctgtggtggaggacaacgaaggcatcgattgg
aagctccggatggagaagggggatgctgcggcccaggatctggtcaactcactgcaggtc
ctggaggtcactgctggggccatggcccccgagctcaaacctctgttgttggagcacctg
ccccacctgttcacctgtctgcagcatccgtacacggccgttcgtcacatggcggcgcgc
tgcgtgggcgtgctcagtaagatcgctaccatggagaccatgcacctgttcctggagcgt
gtgcttccatggctggggtgcatcgaggacagcactaagcaggagggggccatcgaagcc
atggcctgtgtgatggagcagttggatgtagacatcgtgccatacattgtgctgctggtg
gtgccggtgctgggccgcatgagtgaccccagtgacagtgtccgtttcatggccacgcag
tgcttcgccaccctcatccgcttgctacccctggaggctggtatcccggaccctcccacc
atgtcggatgatctgattcgccagaaggccagagagcgtcactttctggagcagctgctt
gacagtaggaagctggagaactacaagattcctgtgcccatccaggctgagctccgcaag
tatcagcaggacggagtgaactggctgtccttcctgaacaagtacaagctccacggtatt
ctctgtgatgacatgggactgggcaagaccctgcagtccatctgcatcctggctggggac
cactacctcagggcacaggagtatgccaaaaccaaggcggcagacagcacccccctgccc
tctctggtggtgtgcccccccaccctgacaggtcactgggtggatgaggtgggcaagttc
tgcaccaaagagtacctgaacccactgcactacacgggaccccctacagagcgagcacgt
ttacagcatcaagtgaaaaagcacaacctggtagtagcctctttcgatgttgtacggaac
gacattgacttttttaggaatgtaaaattcaattattgtatcctcgacgagggccatgtg
atcaagaacgggaagaccaagctctcaaaagccataaagcagttggccgccaacttccga
gttatcctatcaggaacgcccatccagaataatgttctggagctgtggtcgctctttgac
ttcctcatgcccggcttcctgggcacagaacgccagtttgctgcccgctacggcaagccc
atcctggccagccgtgatgccaagagctcatcgcgtgagcaggaggccggggtgctggcc
atggaggcgctgcatcgccaagttctgcccttcctcttgaggaggatgaaaaaggacgtg
ctgcaggacctgccccccaagatcatccaggactactactgcaacctcagccctctacag
gttcagctgtatgaggactttgccaagtcccgggccaaggtcggtgtggaggacacaatc
tccacagcctccacccaggaggaggagaagcccaagctgaaggccacgggccatgtgttc
caggctctgcagtacttgaggaagctgtgtaaccacccaggcctggtactgctgccacag
caccctgagtacaagcgcatcacagaccagctggcagcacaacactccagccttcgagac
atccagcattcgcctaaactctcagccctcaaacagttgttgttggactgtggtctgggc
agcagtggctcagcggagggcacagagtcggtggttgcccaacacagagtgttgatcttc
tgtcagctgaaaagcatgctggacatcgtggagcacgacctgctcaagctccagctgccc
acagtcacctacctgcgacttgacggcagcgtgcaggcgagcctgcgccacgccatcgtc
tccaggttcaacaatgacccctccattgacgtgctgctgctcaccacgcacgtgggtggt
ctgggtctgaacctgactggtgctgacacggtggtgtttgtggaacacgactggaacccc
atgagagacctacaggccatggaccgtgcccacaggataggacagaaacgcgtggtgaat
gtgtatcgtctgatcactcggggcactctggaagagaagatcatgggcctgcagaagttc
aagatgaacatcgccaatgcggtcatcagccaggagaacgccagcctgcagagtatgggc
accgaccagctcctcaacctcttcaccctggacaaggatgggaaggatgataagggcgag
ttgtcgtcctccggagggaaagcctccattaagaacgtgctggacggtctgggggacctg
tgggatcagctgcagtatgacacagagtacaatctggatagcttcatgcacacgctccac
tag
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integrated database retrieval system
