Oncorhynchus gorbuscha (pink salmon): 124038147
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Entry
124038147 CDS
T07892
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a isoform X1
KO
K04256
c-opsin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124038147 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ogo04030
]
124038147 (valopa)
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124038147 (valopa)
G protein-coupled receptors [BR:
ogo04030
]
Rhodopsin family
Vision
Opsin
124038147 (valopa)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
124038147
NCBI-ProteinID:
XP_046209610
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All DBs
Position
LG06:complement(58324637..58350039)
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AA seq
388 aa
AA seq
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MDNIRIAVNGVSFNETAEIYKPHADPFTGPITHLAPWNFVVLATLMFVVTSLSLFENFTV
MLATYKFKQLRQPLNYIIVNLSVADFLVSLTGGTISFLTNAKGYFFLGNWACILEGFAVT
YFGIVALWSLAVLSFERFFVICRPLGNVRLRGKHAAMGLLFVWTFSFIWTIPPVFGWCSY
TVSKIGTTCEPNWYSNNISNHTYIITFFVTCFIMPLGVIIYCYGKLLQKLRKVSHGRLGN
AKKPERQVTRMVVVMIVAFMVGWTPYAAFSIIVTACPTIHLDPRIAAAPAFFSKTAAVYN
PVIYVFMNKQFRKCLIQLFTGKPAPENMNATSERLGMTGESCTGGEMSAIAARIPVCGNT
QPKNEEASPSKCRSFVQLPIPENKVCPM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggataatataagaattgcagtaaatggtgtttcttttaacgagacagccgagatctac
aaaccacacgctgatccgttcactggtccaataacacatcttgcaccttggaatttcgta
gttttggctacgttgatgtttgttgtaacatctctgtctctctttgaaaattttactgtt
atgttggccacttacaagttcaaacagctgagacagcccttaaattatatcattgttaat
ttatctgtcgctgatttcctcgtgtcactcaccggtggaacaataagttttctaacaaat
gccaaagggtatttttttcttggaaattgggcttgcatattggaaggttttgctgtcacc
tatttcgggattgtggctctgtggtccctggcagtcctgtccttcgagcgtttctttgtg
atctgccggcctctggggaatgttcgtcttagggggaagcatgcggcaatgggcctgctg
tttgtctggaccttctccttcatctggacgatccctcctgtgttcggctggtgcagctac
acggtcagcaagatcggcaccacctgcgagccaaactggtactccaacaacatttcaaat
cacacctacataatcaccttctttgtgacctgcttcataatgcccctgggggtgatcatc
tactgctatgggaagctcctacagaagctgaggaaggtgtcccatggcaggctgggtaac
gccaagaaaccggagcgtcaggtgacacgcatggtggtggtgatgattgtggctttcatg
gtgggctggacgccctacgcagccttctccatcattgtcacagcctgtcccaccatccac
ctggaccccagaattgctgctgcacccgctttcttctccaagacggccgcagtctacaac
ccagtcatctatgtcttcatgaacaaacagttcaggaagtgcctgattcagctctttacc
ggcaagcctgcgccagagaacatgaatgcaacgtcggagcgactgggaatgacgggggag
agctgcacggggggcgagatgtcagccatagcagcacgcatcccggtctgcggcaacacc
cagcctaagaatgaggaggcatcccccagcaagtgcaggtcctttgtccagctgccaatc
ccagagaacaaagtctgccccatgtag
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