Oncorhynchus gorbuscha (pink salmon): 124038246
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Entry
124038246 CDS
T07892
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124038246
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124038246
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
SH2
RA_2
Lpg0393_VPS9
Motif
Other DBs
NCBI-GeneID:
124038246
NCBI-ProteinID:
XP_046209819
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All DBs
Position
LG06:complement(65068001..65125094)
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AA seq
1072 aa
AA seq
DB search
MSISSLIECSEEMKGSFFKLIDSFVWEIGTLKKEMVQKAEQAEGDPEPVILQGLDGQVGG
LFLPPCVGVRAGLAGVRDSGYDSLHRRMSVLDRLVQTHAVWLQLGLSQAEATRKLQPQPT
GTFLVRKSTTLQRKVISLRMHQDSETPVKDFPVRECQYTFSLERSGLSFADLFHLVAFCC
ISRDVLPFTLKLPEAISAARTPTDLEVAKQGAGFWDSERCRRRSTLSSLSRTTTHDKSPS
LRQRSVYTPLVTRTPSQLECSQSNGALCFINPLFLKVHHPEGGNHTFPSYTSHNNNPQHL
NNSSITTATTVQVQQHSTSNPEQLKDSPQPHSDSPQSDSPGNSTQHHNSCGSVSRANRVS
LPPPPRPPPPCCAPRRPASPQRQHSMPEKISWINPPKEKERVGEREKGSSLLSRLGSTLS
ISPSSSFLSSSFLSSSPPKKRSISAPISIPLSLSSPSDVDCRLVLDDQTIENAISLSLAK
RALRNATTPDENTEGNSPSTQDQALSCQEEGRGRGGREEDCIQRLSDMSISTDSTDSVDF
SQGFFPPIAEPSPPTTNNLVLPLTHPYSSMEEDYDEDEADFGVSVENDQDQDLTISPPGL
RTKRRASVGAMVIQQALRGHFRKMSGVFSSLLTPEKRAIRRVLELSRDKGSYFGCLVQDY
LSFLQEGGGCQAWQCHASGLELLQTLRQFITQMKSYLRQSSELEPPIESLIPEDQIDYVL
EKAMHKIVLKPLKGVVGVALQEFQVRSGAWQELKENLSLAKARQPHEMGVANAFPPDPVN
IEKIRHKFHTMCKLYSPEKKVTMLLRVCKLIYTIMEHKSGCLYGADDFLPMLTYVLAQCD
MPQLDNEILYMMEVLDPSLLHGEGGYYLTSAYGAMSLIRNFQEEQAARVLSSETRNTLRQ
WHCRRTTQHSAPSVNDFQNYLRVALQDSGCTAKTLQVQPYATTEEICQICAYKFNVPDPE
NYALILLTEGSCQQLAPDTHPQKIKAELHSQPQAAPFHFVFCRVANINHLAATSFEPQSN
LNDITLTKESEPNLNGVALTPSDPQPNLNLGLSPSLSLSLPPNQHNGNSISI
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcagctcactcattgaatgcagcgaggagatgaaagggagcttcttcaagctg
attgactcgtttgtctgggagatcgggactctgaagaaggagatggtgcaaaaggctgag
caagcagagggagatccagagcctgtaatactacaggggctagatgggcaggtgggaggt
ctgttcctacctccctgtgttggtgtgcgggcagggcttgctggagttagggattcaggc
tacgactctttgcatagaaggatgagtgtgctggacaggctggtgcaaacgcacgctgtg
tggctgcagctgggactgagccaggcagaagccacacgcaaactgcaaccacagcccact
gggacgtttctggtgagaaagtcgactaccctgcagaggaaggtgatctctctgcggatg
caccaggactctgagacacccgtcaaagatttccctgtgagggagtgtcaatacacattc
tccttggagagatcaggcctcagctttgcagacctgtttcatcttgtggctttctgctgc
atcagcagggatgtcttgccattcactctaaagcttcctgaagccatctctgcagccagg
acgccaacagacttggaggtggccaagcaaggagcagggttctgggactctgagcgttgc
cgcaggaggagtactctctcctcgttgtccaggacaaccacccacgacaaatcacctagc
ctgaggcagagatccgtttacactcccctggtcacccgcaccccgtcccagctggaatgt
tcccagtccaacggggctctctgcttcatcaatcccctcttcctaaaggttcaccatcca
gagggtggcaaccacacctttccttcctacaccagccacaacaacaacccccagcaccta
aacaatagcagtataactacagctacaactgtacaagtacaacagcactctaccagcaac
ccagagcaacttaaagacagccctcaaccccatagcgacagccctcaaagtgatagccct
ggcaatagcacccagcatcataacagctgtggcagcgtgagccgggctaacagagtttcc
ctcccaccacctcctcgccccccacctccctgctgtgccccccgtcgccctgcctcacct
caacgccagcacagcatgcctgagaagatatcctggatcaatccccccaaagagaaggag
agggtgggagagagggagaagggcagtagccttctctcccgcctgggctccactctcagc
atcagcccttcctcatctttcctctcctcctctttcctctcctcctcccctcccaagaag
cgcagcatcagtgcccccatctctatccccctgtccctctcctccccaagtgacgtcgac
tgccgtcttgttctcgatgaccagactattgagaatgccatatctctcagtctggctaag
cgggcactgagaaacgccaccacccccgatgaaaacacagagggaaacagtccgtccact
caagaccaagccctctcctgccaagaggaaggaagaggaagaggcggaagagaagaggac
tgcatccagcgcctgagcgacatgagtatttccaccgactccactgactcagtagacttc
tcccagggcttcttccccccaatcgctgaacccagcccacccaccaccaataacctggtg
ctgcccctcacccacccctacagcagcatggaggaagactatgatgaagacgaagcagac
tttggcgtgagtgtggagaacgaccaagaccaggacctgaccatctcccctcccgggctg
cgcaccaaacgacgagccagtgtcggggccatggtcatccagcaggccctcaggggccac
ttccgtaagatgagtggggtgttcagctctctcctaacccctgagaaacgggccatacgg
agagtcctggagctgtccagggataagggctcgtactttggatgcctagtgcaggactac
ttgagcttcttgcaggaaggagggggctgccaggcctggcagtgccacgcctcagggctg
gagctgctgcagacgctacgccagttcatcacccagatgaagagctacctgcggcagagc
tctgagctggagccccccatcgagtcactcatcccagaggaccaaattgactatgtccta
gaaaaagccatgcataagatagtcctgaagcccctgaaaggtgtggtgggggtggccctc
caggagttccaggtccgcagcggggcgtggcaggagctcaaggagaacctctcattggcc
aaagccaggcagcctcatgagatgggtgtggccaacgccttccctccggatccagttaac
atagagaaaatccggcacaagttccacaccatgtgtaaactctattcacctgagaagaag
gtgaccatgctgctgcgcgtatgtaaactcatctataccatcatggagcacaagtcaggt
tgtctgtatggagcagatgacttcctgcccatgctgacctatgtgttggcccagtgtgac
atgcctcaactagacaacgagatcctctacatgatggaggttctggatccttctctgctg
catggagaaggtggatactacctgaccagtgcatatggagccatgtccctcattaggaac
ttccaagaggagcaagcagctcgtgtactcagctctgaaacacgcaacacactccgccag
tggcactgtcgccgcaccacccagcacagtgcgccctccgtcaatgacttccagaactac
ctgcgggtagcgctccaggacagcggttgcactgccaaaactctgcaagtgcaaccctat
gccacgactgaggaaatctgccagatttgcgcctacaagtttaacgttcccgaccctgag
aattacgccctaatcctgctcactgagggctcatgccagcagctagcccccgacacacac
ccccagaagatcaaagctgagctccacagtcaaccccaggccgcaccttttcacttcgtc
ttctgtcgggtggctaacatcaatcacctggccgcgacctcgtttgaaccccagtccaac
ctcaatgacatcacacttaccaaagaatctgagcccaaccttaatggtgtggccttgacc
ccttctgacccccagccgaacctcaacctgggtctcagtcccagtctcagcctcagtcta
ccccccaaccagcacaatggtaactccatatccatctga
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integrated database retrieval system
