Oncorhynchus gorbuscha (pink salmon): 124038264
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Entry
124038264 CDS
T07892
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
ogo04261
Adrenergic signaling in cardiomyocytes
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124038264
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124038264
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124038264
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124038264
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124038264
03036 Chromosome and associated proteins [BR:
ogo03036
]
124038264
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124038264
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124038264
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124038264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Y_phosphatase2
DUF6816
Motif
Other DBs
NCBI-GeneID:
124038264
NCBI-ProteinID:
XP_046209858
LinkDB
All DBs
Position
LG06:complement(68391196..68397448)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVAGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGEFLATGDKGGRVVIFQHEQE
CKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRVFANAHTYHI
NSISVNSDHQTYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECQPNQCN
VFVYSSSKGTIRLCDMRAAALCDRHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRGTLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgccggtggaaatgactttcagtggtgtttctcacaagtgaagggggca
atagatgaagatgttgcggaagcggatatcatctcaacggttgaattcaaccattctgga
gagtttctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaaaaatagaccacacctgcgaggggaatacaacgtctatagcacatttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactctgctcactttctgctctcaacaaatgataaaactatcaaa
ttgtggaagatcagtgaacgagacaagcgggctgagggttacaacttgaaagacgaagat
ggacgtctcagggatccctttagaattacctccctgcgggtaccagttctgatgcccatg
gatctcatggtagaagcaagtcctcggagggtgtttgccaacgctcatacatatcatatt
aattccatttctgtaaatagcgatcatcaaacgtacctctccgctgatgacctaagaatt
aacctatggcacttggaaatcactgacagaagctttaacattgtagacatcaagcctgcc
aacatggaggaactgacagaggtgatcacagctgctgagtgccaaccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgagcagcagca
ctctgcgataggcacactaagttctttgaggagcctgaggatccaagcagcaggtcgttc
ttctctgagatcatctcgtccatttctgacgtgaagttcagtcatagcgggcgatacatg
atgacacgggactacctctctgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcacgaataccttcgcagcaagctctgttcattgtatgaaaatgac
tgcatctttgacaagtttgagtgctgctggaacggtagcgacagtgcaatcatgactggc
tcctacaacaacttcttccggatgtttgaccgcaacaccaggaaggacattacactggag
gcctccagggagagcagcaaaccgcgtggcacactcaaaccccgcaaagtctccactgga
ggcaagaggaagaaagacgaaattagcgtggacagcctggatttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaatgtcatcgctgtggcagccaccaacaacctgtac
attttccaggataagatcaactaa
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