KEGG   Oncorhynchus gorbuscha (pink salmon): 124038314
Entry
124038314         CDS       T07892                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03010  Ribosome
ogo04120  Ubiquitin mediated proteolysis
ogo04137  Mitophagy - animal
ogo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    124038314
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124038314
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124038314
   04137 Mitophagy - animal
    124038314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ogo03011]
    124038314
   04121 Ubiquitin system [BR:ogo04121]
    124038314
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124038314
Ribosome [BR:ogo03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    124038314
  Archaea
    124038314
Ubiquitin system [BR:ogo04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   124038314
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124038314
  Exosomal proteins of colorectal cancer cells
   124038314
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Dsc3_N IBR Ubiquitin_5 TBK1_ULD OTU1_UBXL
Other DBs
NCBI-GeneID: 124038314
NCBI-ProteinID: XP_046209992
LinkDB
Position
LG06:complement(74208494..74213146)
AA seq 156 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaagactataaccctcgaggttgagccttca
gacacaattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatctttgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactccgtgggggtgccaaaaagagg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaatggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggtgctggtgtgttcatggccagccacttcgataggcactat
tgtggcaagtgctgcctcacttactgcttcaacaagccagaggacaagtaa

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