Oncorhynchus gorbuscha (pink salmon): 124038361
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Entry
124038361 CDS
T07892
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124038361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124038361
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124038361
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Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
124038361
NCBI-ProteinID:
XP_046210104
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All DBs
Position
LG06:complement(77829868..78031528)
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AA seq
1114 aa
AA seq
DB search
MTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFYKDFTLQID
MFFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALR
LIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQSLS
YWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYG
GSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKR
HFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCPDPDAEDASNIMRVISIKNYSPK
IRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLSTMLANLFSM
RSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLKLLLIAIENKSE
LGESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCG
CKRLIYFEDEHPSTLSPKKKQRNGGMRNSPNNSPKMMSRHDPLLIPGNEQMENMDMNVKQ
YDSTGMFHWCPSKEIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASN
FHYHELKPIVFVGSLEYLRREWETLHNFPKVSILPVKGKMTGTPLSRADLRAVNINLCDM
CVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPDSS
PVHGLVRQASVTTGANIPIITELAKPGKILPLVSFSQEKNCGINIQMITELVNDSNVQFL
DQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEA
LLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLC
FGIYRLRDAHLATPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSH
SSHSSSKKSSSVHSIPTTNRQNRSSKAREAGHKQNATRMNRMSQERKWFTDEPENAYPRN
IQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgtgaaggactgggccggggtcatgatatcagcacagacactcaccggcaga
gtcctggtcgtgctcgtctttgctctcagcattggagcacttggaatatactttatagac
tcttctgatcccatagaatcctgtcagaatttctacaaagatttcacgttacagatcgac
atgttcttcaatgtcttcttcctcctctactttgggctgcggttcatagctgccaatgat
aagctgtggttctggctggaggtcaactcagtggtggacttcttcactgttcctcctgtc
ttcgtatcggtctacttgaataggagctggctgggcttaagattcctgagagccttgaga
ttgatacagttctcagaaattttacagtttttgaatatcttaaaaacaagcaattccatc
aagctggtgaacctgtgttccatcttcataagcacatggctaacagctgccggattcata
catttggtggaaaactcaggggatccttgggaaaacttccaaaattcccagtcactttcc
tattgggaatgtgtctacttgctcatggtcactatgtcaacagtgggctacggggatgtc
tatgcaaaaaccaccctgggacgcctgttcatggtcttcttcatccttgggggtttggcc
atgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagtgcggttaatgggagaaagcacattgtggtctgtggtcatataacgctc
gaaagtgtctccaacttcctcaaagacttcctacacaaggacagggatgatgtcaatgta
gaaattgtttttctccataatatttcccctaatcttgagctggaagccttgttcaaacgc
cactttacccaagtggagttctaccagggatctgttctcaaccctcacgatctggcccga
gtgaagattgagtcagcagacgcctgtctgattctggctaataaatactgtccagatccc
gatgctgaagatgcctccaacatcatgagggtcatctctatcaagaactattcccccaag
atacgaattatcactcaaatgttacaataccataacaaggctcacctgctcaacattcct
agctggaactggaaggagggggatgatgcgatctgtctagcagagctgaaggctggcttc
atagctcagagctgtctagcccagggcctctccaccatgcttgccaatctcttctccatg
aggtctttcatcgagattgaagaggatacgtggcagaagtactatttagaaggggtagct
aatgagatgtacacagagtatctgtccagtgcctttgtggggctctccttcccagcagtc
tgtgagctgtgctacgtgaagctgaagctgttgcttatcgccatcgagaacaagtcggag
ctgggagagagcagaagccgaaagcgcatcctcatcaacccggggaaccacgtaaagatg
caggaaggaactctggggttcttcatcgccagcgacgccaaagaagtaaagagagcattt
ttctactgcaaagcttgtcacgacgacatcacagaccccaaacggatcaaaaagtgtggc
tgcaaacgactgatttattttgaagatgagcacccgtcaactctgtcgcccaagaaaaag
cagcggaacggaggtatgcgaaactcacccaacaactcgccaaaaatgatgagcaggcat
gaccctctactaatccctgggaacgagcagatggagaacatggacatgaatgtgaagcag
tacgactccacgggaatgttccactggtgcccatctaaagagattgagaaggtcatcctg
acccggagtgaggcatccatgacggtgttgagcggccatgtagtggtctgtatatttgga
gatgtcacgtccgctctagtggggctgcgaaacttggtgatgcctttgagagccagcaac
ttccattatcacgagctgaagcccattgtgtttgtgggctcgctggagtacctgaggaga
gaatgggaaactctacacaacttccccaaggtctccatactacctgtgaagggtaaaatg
actggtacgccattaagtcgtgcagatttaagggctgtcaacatcaacctctgcgacatg
tgcgtgatactgtcggccaatcagaacaatatcgacgacgcctcgctgcaggataaggaa
tgcattctggcgtcgctcaacatcaagtctatgcagtttgacgacagcatcgggctcttg
caggctaactcccaaggtttcacgcctcctggaatggaccggtcctctccagacagcagt
ccagtacatggtttagtacgccaggcctccgtcaccaccggcgccaacatccccatcatc
actgaactagctaaacctggcaaaatactgcctttggtttcattcagtcaggaaaaaaac
tgtggaatcaacatacaaatgataactgagctggtgaatgactccaacgttcagttcctg
gaccaagatgacgatgatgacccggacacagagctgtacctgacgcagcccttcgcctgc
ggaaccgccttcgctgtcagcgtgctggactctctcatgagtgcaacatacttcaacgat
aatatcctcaccctgatccggacgctggtgactgggggagccaccccggagctagaggct
ctattggccgaagagaacgccctgcgagggggctacagcacgccacagacactggccaac
cgagacaggtgtcgtgtagcccagctagccctctatgacgggccctttgccgacttgggg
gatggcggttgctatggagatttgttttgtaaagcgttgaagacgtacaacatgttgtgc
ttcggaatatacagattgagagacgctcacctcgccacgcctagccagtgtaccaaacgg
tatgtgatcaccaaccctccgtatgagtttgagctggtccccacagacctgatcttctgc
ctgatgcagtttgaccacaacgcgggtcagtcccgggccagcctctcccacagctctcac
tcctcccattcctccagcaaaaagagctcgtccgtccactccatccccaccaccaaccgg
cagaaccgcagcagcaaggcccgggaggccggccacaaacagaatgcaacaaggatgaat
agaatgagccaagaaaggaaatggtttacagatgaaccagaaaatgcctacccacggaac
attcagatcaagcccatgagcactcacatggccaaccaaatcaaccaatacaaatccact
agcagtctgattccaccaatcagagaagttgaagatgaatgctga
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