Oncorhynchus gorbuscha (pink salmon): 124038495
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Entry
124038495 CDS
T07892
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124038495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124038495
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124038495
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
124038495
NCBI-ProteinID:
XP_046210404
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Position
LG06:complement(88409002..88644994)
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AA seq
1149 aa
AA seq
DB search
MPKGKHSYYPDSPSIRISKMDVIIPFSPDVPCDSNGQRMWWAFLASSMVTFFGGLFIILL
WRTLKYLWTVCCHCNTKKKNAQRVHNPTSHGDGIKHTKETVAALSEVGWMTSVKDWAGVM
ISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCQNFYKDFTLQIDMAFNVFFLLYF
GLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFL
NILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQSLSYWECVYLLMVT
MSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKH
IVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGS
VLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYH
NKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTW
QKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKLLLIAIEYKSDIRESSTLINPG
NHVTMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRLLYSKNNYNGYI
KSIEEEQYSTLSPKKKQRNGDTRNSPNGSPKMMRHDPLLMPGNEQIENMDMNVKKYDSTG
MFHWCQSKDIEKVILTRSEAAMTVLSGHVVVCIFGDAKSALVGLRNLVMPLRASNFHYHE
LKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPLHGGLVRQAS
ITTGANIPIITELGMSAVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMS
ATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDG
PFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQSHTSQCTKRYVITNPPYGFE
LVPSDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSLTATNRTNRAKSRDSRD
KQKKDMVYR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaggtaaacatagttactacccggactctccctctatccgcatatccaagatg
gatgtgatcatcccgttctccccagatgtgccctgtgatagcaacgggcagcgcatgtgg
tgggctttccttgcctcctccatggtcacgttctttgggggtctcttcatcattctgctc
tggagaactctcaagtacctgtggaccgtctgctgccactgtaacaccaaaaagaagaat
gctcagcgggtccacaaccctacctcccatggggatgggatcaagcacaccaaggagacg
gtggctgcactcagtgaggtgggctggatgacctccgtcaaagactgggctggggtcatg
atatcagcccagacactgacgggcagagtcctggtggtgcttgtctttgccctcagcatc
ggagcccttgtaatatacttcatagattcctctgaccccatcgagtcctgtcagaacttc
tacaaagacttcacgctacagatagacatggctttcaacgtcttcttcctcttgtacttt
ggtctacggtttattgcagccaatgacaagctgtggttctggctggaggtgaactcagtg
gtggacttcttcactgttcccccagtgttcgtgtctgtttatctcaacaggagctggctt
ggcttgaggtttttaagggcgttaaggttgatacagttctcagaaatcttacagtttttg
aacatattaaaaacaagcaattccataaaactggtgaacttatgttcaatcttcataagt
acatggctaacagcggcaggcttcatacatctggtggaaaactcaggggatccttgggaa
aacttccaaaattcccagtcactttcctactgggaatgtgtctacttactcatggttact
atgtccactgtgggctatggagacgtgtatgcaaaaaccaccctgggacgacttttcatg
gtcttcttcatccttggtggtttggccatgtttgcgagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcac
atcgtggtctgtggtcatataacacttgaaagtgtgtccaacttccttaaagacttccta
cacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccctaat
cttgagctggaagccttgtttaaacgccacttcacccaggtggagttctaccagggatct
gttctcaacccacatgacctggccagagtcaagatagagtcagcagacgcctgtttgatc
ctagctaataaatactgtgcagaccctgatgctgaggatgcctccaacatcatgagggtg
atatccatcaagaactaccacccaaaaatcagaatcattacccagatgttgcagtaccac
aacaaggcccaccttttgaatattcccagttggaactggaaggagggtgacgatgccatt
tgccttgctgagctgaagctgggcttcatagcacagagctgtctggctcagggcctgtcc
accatgctggccaacctcttctccatgaggtccttcatcaagattgaagaggacacgtgg
cagaagtattacctggaaggagtagccaatgaaatgtacactgagtatctgtctagtgcc
tttgtgggcttatccttccccaccatttgtgaactctgctatgtgaagctgaagctgcta
ctgattgctatcgagtacaagtctgatataagggaaagcagcaccctcatcaaccctggg
aaccatgtgacgatgcaggaaggaaccctggggttctttatcgccagtgatgccaaagaa
gtaaagagggcacttttttactgcaaagcttgtcacgatgacatcacagatcccaaaagg
ataaagaaatgtggatgcaaacgattgctttattcaaaaaataactataacggatatatc
aaatcaatcgaagaggagcagtattcgacactgtcgcctaaaaagaaacaacgtaatgga
gacacaaggaactcacccaacggttcaccaaaaatgatgaggcatgaccctctcctcatg
ccggggaacgaacagattgagaacatggacatgaacgtgaagaagtacgactccacaggg
atgttccactggtgccagtccaaagacatcgagaaggtcatcttgaccagaagtgaagct
gccatgactgtcctaagcggccacgtggtcgtctgtatatttggagacgcgaagtcggct
ttggtgggcctaaggaaccttgtgatgcctctgagagctagcaacttccactaccacgag
ctgaaacccatcgtgtttgtgggttctctggagtatctgaagagggaatgggagaccctt
cacaatttccccaaagtctccatcttacctggcacaccattaagccgggccgatctgagg
gctgtcaatatcaacctctgtgacatgtgtgtcatcctgtcggccaatcagaacaatatt
gacgacgcgtcactgcaagacaaggaatgcatcctggcgtcactcaacatcaagtccatg
cagtttgacgacagcatcggggtcttgcaggctaactcccaaggtttcactcctccaggc
atggacaggtcctctcctgaaaacagtccacttcatggggggttggtccgacaggcttcc
atcacaacaggggccaacatccccataatcactgaactaggtatgtcagcagtgaatgac
tccaatgttcagttcctggaccaggatgatgatgatgaccctgacacagaattgtacctc
actcagccctttgcctgtgggacggccttcgcagtcagtgtgctggattccctgatgagt
gcgacatacttcaatgataatatcctcaccctgatccggacgctggtaacagggggggcc
actccggagctggagggtctgttggcggaggagaacgcattacgaggaggctacagcacg
ccgcagaccctcgctaaccgggacaggtgtcgtgtggcacagctagccttgtacgacggg
cctttcgctgacttgggagatggtggctgctacggtgacttattttgtaaagctttaaaa
acatacaacatgctgtgcttcggaatttatcgattaagagacgcacatttaaacacacaa
agtcatacaagtcaatgcactaaacggtatgtgataaccaatccgccatatggttttgag
ttggtgccatcagacctgatcttctgcctgatgcagtttgaccacaatgcgggtcagtcc
agggccagcctctcccacagctcccactcctcccattcttccagcaaaaagagctcctcc
gtccattctctcactgccaccaaccgtaccaaccgcgccaagagcagggactcgcgggac
aaacagaaaaaagacatggtttacagatga
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