Oncorhynchus gorbuscha (pink salmon): 124038574
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Entry
124038574 CDS
T07892
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04136
Autophagy - other
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124038574
04136 Autophagy - other
124038574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124038574
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124038574
Membrane trafficking [BR:
ogo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
124038574
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124038574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Vps41
CPSF_A
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
124038574
NCBI-ProteinID:
XP_046210571
LinkDB
All DBs
Position
LG06:complement(94602082..94617362)
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AA seq
446 aa
AA seq
DB search
MEERETPDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPHNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GDEVPQEAQQEEKESEDGRSLPPSTSPSYAATVSLPSTAPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVIKQTN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacacccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggcggtggtcagtctctctatgccccga
cgtatgaacgtctatcacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacaccccacaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctacctggcgtaccctggc
agtcaaaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaaccaaactc
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagatgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcggctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggagatgaggtgccacaggaagcacaacaggaagagaaggagtcagaggatggaaggtcc
ctcccaccgtcaaccagcccatcatacgctgccactgtgtccctcccctcgactgcaccc
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgccgagggacccgtctgtctggatgatgagaatgagtttcctccc
gtcatcaaacagaccaactga
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