Oncorhynchus gorbuscha (pink salmon): 124038600 Help Entry 124038600         CDS       T07892                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism ogo  Oncorhynchus gorbuscha (pink salmon) Pathway ogo04510   Focal adhesion ogo04512   ECM-receptor interaction ogo04518   Integrin signaling ogo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ogo00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124038600    04518 Integrin signaling     124038600  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     124038600   09142 Cell motility    04820 Cytoskeleton in muscle cells     124038600  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ogo00536]     124038600 Glycosaminoglycan binding proteins [BR:ogo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124038600 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  124038600 NCBI-ProteinID:  XP_046210609 LinkDB All DBs Position LG06:complement(98221755..98254918) Genome browser AA seq 1459 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDSGFGSCSLDGQQYNDKDVWKPEPCQICVCDSGT VMCDEVICEDTTDCADPIIPDGECCPICPDDSETEGPQGPVVSETEGPEGGVGPKGDDGP EGVPGNDGMDGQPGLPGPPGPPGPPGLGGGNFSPQMHHGYEEKSSGGQAQQGPMGPMGPR GLAGPPGNTGPPGHHGPPGEPGEPGGAGPMGQRGTMGPPGKNGDNGEPGRSGRPGERGSA GPQGARGTPGTPGLPGIKGHRGFNGMDGAKGDGGPAGPKGEGGSPGSSGNPGAMGARGLP GERGRPGPAGPSGGRGNDGNSGPAGSPGPTGPSGSPGFPGGAGAKGETGPQGGRGSDGPQ GSRGEPGNPGPAGAAGPSGAPGSDGQSGGKGATGAVGISGAPGFPGSRGPAGPPGAGGGP GPKGNHGEQGAQGSKGEPGVKGEPGSSGPGGPPGPSGEEGKRGARGEPGGAGGAGPPGER GMPGMRGFPGSDGAAGGKGGPGERGANGPMGAQGATGEAGRPGEPGMPGSKGMTGSPGSP GPDGKVGPAGITGNDGRSGPPGSSGSRGQPGVMGFPGPKGPAGDSGKPGERGEAGAVGGV GAPGKDGDSGAPGPQGPAGGQGEKGEGGPAGPNGFQGLPGTQGATGEPGKAGDQGVPGEV GGPGPSGSRGDRGFPGERGGIGSVGPSGPRGPNGSPGNDGARGETGVAGAPGGMGAPGLQ GMPGERGSGGNSGAKGERGDGGPKGADGGPGKDGMRGMTGPIGPPGPTGAHGEKGEGGLG GPPGPAGGRGSPGERGEHGAPGPAGFAGPPGADGQPGNKGENGNNGPKGDAGAPGPGGPV GAPGPQGPAGNAGTKGTRGAAGPPGASGMPGPGGRVGPPGGSGAPGPPGPPGPSGKEGQR GGRGETGHAGRPGEAGAAGPPGPSGQSGAKGNDGPMGAPGTPGPGGIAGQRGIVGGPGGR GASGSPGVPGQAGEPGKQGPGGPVGERGSPGPMGPPGLSGAPGEAGREGSTGHDGVAGRD GPPGPKGDRGENGNAGSPGAPGPPGAPGPSGASGKTGSRGESGPAGPAGPNGPAGGRGGL GPAGARGDKGEAGEGGERGHKGHRGLSGMPGLPGPAGSPGESGPAGLNGPSGPRGPHGSS GSTGKDGMNGLPGPIGPPGPRGRNGEMGPAGAPGSPGLPGPPGPAGGGFHVAPIYNQEKG PDPMRGGGYHYRADEPDMMNDRDMEVDTTLKSLSQKVENIRSPEGTQKNPARMCRDIRMC HPEWKSGQYWVDPNQGSPLDAVQVFCNMETGETCIYPSQDTVPMKNWYTSKNIREKKHIW FSESMDNGFQFQYGSEGSNPEDVNIQLTFMRLMSNEASQNVTYHCKNSVAYMDKGTGNLK KALLLQGSNEIEIRAEGNSRFTYTVSEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAPM DVGAPDQEFGVEVGPVCFV NT seq 4380 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgctgttgctgagcgcaacagtactattggcg agaggtcaaggagaggacgatagtggattcggcagctgctcgttggacggccaacaatac aacgataaggatgtgtggaaaccagagccctgccagatctgcgtctgcgacagcggaacc gttatgtgcgacgaagtgatttgcgaggacacaaccgactgcgccgaccctatcatcccc gacggcgaatgctgtcctatctgccccgatgactccgagacagagggtccccaggggcca gtagtgtctgagacagagggaccagagggaggagttggccccaagggtgatgatggtcct gagggtgttcccggtaacgatggcatggacggccagcctggccttcccggccccccgggc ccccctggacctcctggccttggcggtggaaacttctctcctcagatgcaccacggttat gaggagaaatccagtggcggccaggcccaacagggaccaatggggccaatgggtccccgt ggtctcgctggcccaccaggaaacactggtccccccggtcatcatggtccccctggcgag cccggtgagcctggtggtgctggtcccatgggtcaacgtggtacaatgggccccccaggc aagaacggagataatggtgagcctggcaggtctggtcgtcccggtgagcgtggttccgcc ggccctcagggagctcgtggaacccctggaactcctggcctccccggcattaagggacac agaggtttcaatggaatggatggtgccaagggagacggtggcccagccggccctaaggga gagggtggttcccctggatccagcggtaaccccggtgctatgggtgctcgtggtcttcct ggtgagagaggccgccccggacccgctggcccttctggtggccgtggtaatgatggtaac tctggtcctgctggatcccctggacccactggcccatctggttcccctggattccccgga ggcgctggagctaagggtgagaccggtcctcagggaggccgtggctcagacggaccccaa ggatctcgtggagagcccggtaaccctggacccgctggtgctgctggaccctctggtgcc cccggaagtgatggccagtcaggaggcaagggtgccactggtgctgttggtatctctggt gctcctggtttcccaggatcccgtggccctgctggacctcccggagctggtggtggcccc ggccccaagggtaaccatggtgagcaaggagcccaaggctccaagggagagcccggtgta aagggagagcctggttcctctggtcctggcggcccccccggtccatctggggaggaggga aagagaggtgcccgtggtgagcctggtggagctggtggtgctggaccccctggggagcgt ggtatgcctggtatgcgtggtttccccggctctgatggagctgccggtggcaagggtggc cctggtgagcgtggagccaatggaccaatgggagcccaaggtgccactggtgaggctggt cgccccggggagcctggcatgcctggatccaagggtatgactggtagccctggcagccct ggccccgatgggaaagttggccctgctggtatcactggaaacgatggtcgttccggaccc ccaggctcctctggatccagaggtcagcctggagttatgggattccctgggcccaaagga cctgctggtgacagcggcaagcctggtgagagaggagaagccggagctgttgggggtgtt ggtgcccctggcaaagatggtgactctggtgctcccggaccacaaggccctgctggaggt caaggagagaaaggagagggcggccccgctggtcctaacggattccagggtctgcctgga actcagggagctactggtgagcctggcaaggctggtgatcagggtgtgccgggtgaggtt ggaggtcccggccccagtggatccagaggtgacagaggtttcccaggtgagcgtggtggc atcggctctgtcggcccctctggaccccgtggacctaatggttctcctggtaacgatggt gctaggggtgagactggagttgctggtgcccctggcggtatgggagccccaggtctgcaa ggaatgcccggagagcgtggctcaggtggcaactccggtgccaagggagaacgaggtgat ggtggccccaagggagccgacggtggccctggaaaagacggcatgcgtggtatgactgga cccatcggaccccctggacccactggtgctcatggagagaagggtgagggtggtcttggc ggcccccctggtcccgctggaggtcgcggttcccctggtgagcgcggtgagcatggtgcc cctggacctgctggattcgctggaccccctggtgctgatggtcagcctggcaacaaggga gagaatggtaacaacggccccaaaggtgatgctggtgctcctgggcccggtggaccggtt ggtgctcctggacctcagggtcctgctggtaatgctggtactaaaggaactcgtggtgct gctgggccccctggtgcttctggtatgcctggtcctggtggaagagttggccctcctggt ggaagtggagcccccggacccccaggcccccccggcccctctggtaaagagggacagagg ggtggacgtggtgaaactggtcacgctggtcgccccggtgaggctggagccgccggaccc ccaggaccctcaggacaatctggagccaagggtaatgatggcccaatgggagccccagga acccccggacccggaggtattgctggccagcgtggtattgtggggggcccaggaggaagg ggagccagtggtagcccaggagttccaggacaagctggggagcctggtaagcagggacct ggcggccccgtcggtgagcgtggatcccctggccccatgggaccccctggcctgtctggt gcacccggtgaggctggtcgtgagggttccactggtcacgatggtgttgccggtcgcgat ggaccccccggtcccaagggtgaccgtggtgagaatggtaatgctggttcccctggtgct cctggacctcccggtgcccccggtccatctggtgcttctggcaagactggtagccgtgga gagtctggtcctgctggtcctgctggccctaacggtcctgctggtggtcgtgggggtctt ggccctgctggtgctcgtggagacaagggagaggctggagagggtggagagagaggccac aagggacacagaggtttgagcggcatgcccggacttcctggacccgctggatcccctgga gagtctgggcctgctggacttaacggaccttctggaccccgaggaccccatggttcttct ggctccactggtaaagatggcatgaacggtctgcctggccccatcggaccccccggaccc cgtggtcgcaacggagagatgggacctgctggtgctcctggttctcctggtctgcccgga cctccaggtcccgctggcggcggcttccatgtcgcaccgatctacaaccaggagaaggga cctgaccccatgcgaggaggaggataccactaccgtgctgacgagcctgacatgatgaac gaccgtgacatggaggtggacaccaccctgaagagcctcagccagaaggtggagaacatc cgcagccctgagggaacccagaagaaccccgcccgcatgtgccgtgacatcaggatgtgc caccctgaatggaagagcggccagtactgggtggaccccaaccagggctctcctctggat gctgtccaggtcttctgcaacatggagactggagagacctgcatctacccatcccaggac actgtccccatgaagaactggtataccagcaagaacatcagggagaagaagcacatctgg ttctcagagtctatggacaacggcttccagttccagtacggtagcgagggctccaaccca gaggacgtcaacatccagctgaccttcatgcgcctgatgtccaacgaggcatcccagaat gtcacgtaccactgcaagaacagcgtggcctacatggacaagggcacgggcaacctgaag aaggccctgctgctccagggatctaacgagatcgagatcagagctgagggcaacagccgc ttcacatacactgtcagcgaggacggctgcacgtcacatactggcacatggggcaagaca gtcatcgactacaagacatcaaaaacatctcgcctgcccatcattgacatcgctcctatg gacgttggtgcacctgatcaggagtttggcgtcgaagttggccctgtctgcttcgtataa

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