Oncorhynchus gorbuscha (pink salmon): 124038637
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Entry
124038637 CDS
T07892
Name
(RefSeq) integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04514
Cell adhesion molecules
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124038637
04514 Cell adhesion molecules
124038637
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124038637
09142 Cell motility
04820 Cytoskeleton in muscle cells
124038637
04810 Regulation of actin cytoskeleton
124038637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124038637
Cell adhesion molecules [BR:
ogo04515
]
Integrins
Integrin alpha subunits
124038637
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
124038637
NCBI-ProteinID:
XP_046210678
LinkDB
All DBs
Position
LG06:complement(102625700..102779286)
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AA seq
1038 aa
AA seq
DB search
MVLFLSRMRQRMGHVLNQKRSLLDVLCVYLSVSVVQSYNIDLEHAVVFRGPDSSFFGYSV
LEHYHDNTRWVLVGAPKANSSYSSSLHTPGAVFKCRVHSNPERRCTEMNLGRGNKPRESC
GKTCQGDRDDEWMGVSLARQDKPNGKILACAHRWKNVFYDSELILPHGYCSIIPPTLQGR
TQALIPCYEDYKQKYGEEHGSCQAGIAGVFTEELVVMGAPGSYYWTGTVKVYNLTSNTFY
NPNKEDIDSHRYSYLGYAVTTGHFSSPNIIDVAAGAPQHSGEGKVYIFRINGVSLVKIFQ
ASGTMMGSYFGSSLCGVDLNRDGLSDLLVGAPMHSTLRDEGQVSVYLSKGNGVMEEAGLL
NGDNAYSAHFGECITAIGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVTKYSMRV
SGQSINPTLQMFGQSISGNVDMDSNGYPDITIGAFMADSVVLLRSRPVITVDVSIYLPVS
INISVPQCHEGPQHLNCFNARVCLLFRGKHLPGQIELLYNLTADVDKRQRSQSSRVYFIQ
NGAQISLMSNELSLDINREDCQQYTAYVKKDVKDVFTAITFEVAYTLGKHVVNGHLDKDL
PALTPVLRWRKGDKMAAKNETWFERNCLSDDCAADLRLHGKLLLSGLHVRSHLALGGVRN
VSLNVTISNAGDDAYDTNIYFNFSRDVFYINYWQKEEKGISCGLVALDFLQCSVGFPFMR
AKTKYHLAVIFDTSRLSGENETLQFLVHAKSANPEHRLLDNKLDLSIPLVHEVDTAITGL
VTPTSFLYGNSIDASRFMQLEDMECNFQPLNFTFQVINNGPSRLPGSIVDIRIPNRLAGN
GADMFHIMDTQVAEGQGNCTPHRNPQPCSISQDRESIFHTIFAFFTKSGRRVLDCDRPGR
ACLTISCTLGSQSKEEVVSIHVKLLLNIEILKRDSSSLIQFVTRGNVRVDGRAIELPQGL
SEDTSLVFEALHSQEPRGYVVGWIIAISLLVGILIFLLLAVLLWKMGFFRRRYREIIEAE
KNRKDRADESWDWVEKNH
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgttcctctcaaggatgcgccaaaggatgggtcatgttctgaatcagaagagg
agccttttggatgttctctgcgtgtatttgtctgtttctgtagttcagtcctacaacatt
gacttagaacatgctgttgtgttccgtggacctgactcgagtttctttggatactctgtt
ctggagcactatcatgacaacacgcgctgggttctggtaggggcccccaaggccaactct
tcctacagcagctcacttcacaccccgggagccgtgttcaagtgccgtgtccacagcaac
ccagagagacgctgcacggagatgaacctgggccgagggaataagccccgggagtcttgt
gggaagacatgccagggagacagggatgatgagtggatgggggtcagcctcgcccggcag
gacaaacccaatggcaaaatactggcttgtgcccaccgttggaagaatgtcttctatgac
tctgagctcatccttccccatggttactgttccatcatccctcctacgctacagggccgg
acccaagccctcatcccctgctacgaagactataagcagaagtatggggaagagcacggc
tcgtgccaagcggggatagcaggcgtttttactgaggagctggtggtgatgggagctcca
ggatcatactactggacaggaacagttaaggtctacaacctgacctccaacaccttctac
aaccccaacaaagaagacattgactcacacagatacagttatctaggttatgccgtgact
actggacacttctcctctcctaacatcatagatgtggctgcaggagctccacaacacagt
ggagaggggaaagtttacattttcagaatcaatggtgtgtctttggtgaagatctttcaa
gcctcagggacaatgatgggctcttactttggctcctcattatgtggagttgacctgaac
agggacggcctgtcggacctgctggttggagcgcccatgcacagcacgctacgggacgag
ggacaggtctctgtctacctcagcaaaggcaacggtgtgatggaggaagcaggactctta
aatggtgataatgcctacagtgcacactttggagagtgcatcactgcaattggagacatt
gatgacgatgggtaccaagatgtggccataggagcacccaaagaagatgactacggtgga
gcggtttacatttaccatggtgatgccacaggaatcgtcaccaaatattctatgagagtg
tctggacagagcattaaccccaccctccagatgttcggccaatcaatctctggcaatgtg
gacatggacagcaatggatatccagatattaccattggtgcatttatggctgatagcgtg
gtgttattgaggtcccggccagtgatcactgtggacgtgtctatctacctgcctgtctcc
atcaacatctctgtgcctcagtgtcacgagggaccacaacacctcaactgtttcaacgca
agagtctgcctgctcttcagaggaaaacacctgccaggacaaatagagttgttgtataac
ctgacagctgatgtggataagaggcagaggagccagtcttccagagtgtacttcattcag
aacggagcccagatcagcttaatgagcaacgagctcagtctggacatcaacagagaggat
tgccaacagtacactgcatatgttaagaaggacgtgaaagacgtattcacagccatcacc
tttgaggtggcctacaccctggggaagcatgtggtgaacggtcacctggacaaagacctg
cctgctcttacacctgtactgcgctggaggaaaggagacaagatggcagcaaagaatgag
acatggttcgagaggaactgcctgtctgacgactgtgctgctgacctgagactccatggg
aaactactgctttctgggctccacgtgcggtcccatctggccctaggaggagtgaggaat
gtctctctgaacgtgaccatctccaacgcaggggacgatgcctacgacaccaacatctac
ttcaacttctccagagatgtcttctatatcaactactggcagaaggaagagaagggcatt
tcctgtggtcttgttgctttagacttcctccaatgcagcgtgggatttcccttcatgaga
gcaaagactaagtatcatcttgcagtgatcttcgacacaagtcggctttcaggggaaaat
gagacattgcagtttttagttcatgcaaaaagtgccaaccctgagcataggctgttggac
aacaagttggatctgtctatcccactggtccatgaggtggacacagctatcactggttta
gtgactccaacatccttcctgtatgggaactccatcgatgcttctcgcttcatgcagctg
gaggacatggagtgtaacttccagcctctaaacttcacctttcaggtgatcaacaacggc
cccagcaggttacctggctccatagtggacatcaggatcccaaaccgactggctggcaat
ggggccgacatgttccacatcatggacacacaggtggcggaggggcaagggaactgcacc
cctcataggaacccccagccctgttccatctcccaggacagagagagtatcttccacacc
atctttgccttcttcaccaagtctggacgcagggtcctggactgtgaccggccagggaga
gcatgtttaaccatctcatgtactctgggctcccagtccaaagaggaagttgtcagtata
catgtgaaacttctactaaacatagagatactgaagagggacagctcatcgctgatccag
ttcgtgactaggggtaatgtgagagtggacgggagggccatagagctaccgcaggggcta
tcagaagacacttcactggtgttcgaggcgctccacagccaggagccaagaggatatgtt
gttggttggatcattgccatcagcctgctggtgggaatactcatcttcctactgctggct
gtgctgctctggaagatgggtttcttccgccggcgctaccgggagatcatcgaggccgag
aaaaacaggaaggacagagctgacgagagctgggattgggtggaaaaaaaccactga
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integrated database retrieval system