Oncorhynchus gorbuscha (pink salmon): 124039160
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Entry
124039160 CDS
T07892
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124039160
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
Patched domain-containing proteins
124039160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
124039160
NCBI-ProteinID:
XP_046211016
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All DBs
Position
LG07:25123197..25126593
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AA seq
709 aa
AA seq
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MVGQKGKTYEKLCAMKGNRCFSNDLLDIINGTASTIKKANLTFPYHNSTSNTIFLGTELG
GVVLNSSIIVSAKAVRLFYFLRENNEAENDDWLHGFTQVFSNLSDELNKRQIQVSHFTSN
SREEEFKENSKSVIPLFSVTYFLAISFSIISCLRLDCVRNKVWVAIFGALSAGLAVLSSF
GLLLLCGMPFAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDNVEDRMAATYKEAAVSI
TITTLTDALAFYIGLLTPFRSVQSFCMYTGTAVLFCYLYNITFFGAFMALNGSREKGNRH
WLTCMKVPEPEDSPEKYNICCVGGAYDQETGKEEVMPINNFFKMYYGPFLTNTWTKVFVI
LLYAGYLGSSIYGCFQIQEGIDLKNLAADSSYVGSYYDNEDQYFSEYGPNVMVVLTDSKF
QYWDQTARKRLHTCLERFESLTLDGRSLVAKDMTLSWLNEYVKVINPNNKTIFMDSLPAF
LQRSDFRQDVNISNKVIIASRMFIQTINVSTAVDEKNMLNKLRETANGCSEKLVVYHPAF
IYFDQYAVIVSNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVAGFMALWD
VNLDSVSMINLVICIGFSVDFSAHISYAFVSSKEVTANKKAVDAVYHLGYPIIQGAVSTI
LGVVVLSAAESYIFRTFFKIMFLVILFGVLHGIVFIPVFLTFFGICNFN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggtaggccaaaaaggaaaaacctatgaaaaactttgtgccatgaaaggtaacaggtgc
ttttcaaatgacctgttagatatcattaatggcacagctagtacaattaagaaggcaaac
ttgacctttccttatcataattcaacatcaaacaccatctttttggggacagaacttggt
ggagtagttttgaattcaagtatcatcgttagtgcaaaggctgttcgactcttctacttt
ctcagagaaaacaacgaggcagaaaatgatgattggctacatgggtttactcaagtgttt
tccaacttgtcagatgaattgaataagcggcagattcaagtttcacacttcacatctaat
tctagagaggaggagtttaaggaaaactccaaatctgtgattcctctcttctccgtcaca
tacttcctggccataagtttttcaattatatcttgcttgaggttggactgtgtgaggaac
aaggtgtgggtggccatctttggtgctctatctgcaggcctagctgtgctgtccagtttc
gggttgttgctgctctgtggaatgccctttgccatgactgttgcaacggctcctttctta
atactgggaattggtgttgacgacatgttcatcatgatttcctgctggcagcagactcaa
gttcatgacaacgtagaggaccgtatggcagctacatacaaagaggcagctgtctctatc
accatcacaacactaactgatgccctggccttctatattggtctgttaactccctttcgt
tctgtacaatccttttgtatgtatactggcacagctgtcctgttctgttacttgtacaat
attaccttctttggtgcatttatggcattgaatgggagtcgtgaaaagggtaacagacac
tggctgacatgcatgaaggttccagaaccagaggatagtcctgaaaagtacaatatctgc
tgtgtaggaggagcttatgaccaggaaacgggaaaagaggaagttatgcccattaacaac
ttctttaagatgtactatgggccatttctaacaaatacttggaccaaggtgtttgtgatc
ctgctctatgctggatatttgggctcaagtatctatggttgcttccaaatacaagaaggc
atagaccttaaaaacctagcagctgatagctcatatgtgggtagctattacgataatgag
gaccaatacttttcagagtatggtccaaatgttatggttgttctgactgacagtaagttt
caatattgggaccaaactgctcgaaagcgtcttcatacttgtcttgaacgttttgagagt
ctaacgttggatggtcgatcattggttgctaaagatatgactctttcttggcttaatgaa
tatgtgaaagttataaatccaaataacaaaaccattttcatggatagtttacctgcattt
ttacaacgatcagacttcagacaagatgtgaatatttcaaacaaagtcataattgcctcg
cgaatgtttattcagacaatcaacgtcagtacagctgttgatgaaaagaacatgttgaat
aagcttcgagagacggctaatggttgttcagaaaagttggttgtttaccacccagctttc
atatactttgaccagtatgcagtcattgttagtaataccatccaaaacattgtagtcgcc
actcttgccatgctggtgatctccctcatgttgatccccaaccccatatgttctctgtgg
gtgacctttgctattgcctctgtcatagtgggtgttgctggtttcatggcattatgggat
gtcaatctagactctgtatccatgatcaatcttgtcatctgcattggtttctcagtggat
ttttctgctcacatttcctatgcttttgtctctagcaaagaggtcactgctaataagaag
gctgtagatgctgtctatcacttggggtatcccatcatacagggagctgtgtctactatt
ttaggagtggtggtgctgtctgctgctgagagctacatcttcagaaccttctttaagatc
atgttcttggtcattttgtttggggtacttcatggcattgttttcatccctgtttttctg
accttctttggcatatgcaattttaattga
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