Oncorhynchus gorbuscha (pink salmon): 124039164
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Entry
124039164 CDS
T07892
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124039164
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
Patched domain-containing proteins
124039164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
LPD5
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
124039164
NCBI-ProteinID:
XP_046211025
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All DBs
Position
LG07:complement(26661230..26668607)
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AA seq
765 aa
AA seq
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MGCQRTDCIEKPLSNLFEKFGRIVGTYPVWFFVITLIVSGILGGGFYFLKDREDNDIERQ
FTPRSGPSKIARAFVKENFPNDNAEFSSQRLYEEGNYASIIVVSNDKSNILSTEHLKNII
KVNDKVKDISVDVDQRELKFSHLCAKTNGHCVSNEILEIIDFNASRIEQTNITFPLYTHK
SRQIFLGSAIGGVQVNVKSEVKSAKAVKLFYFLESHSTRAEVWLKEFQRILSDERDNENI
KVFYYTSQSKQEEIEKHTTDGIPLFSATYALAIAFSVISCLRLDNVRNKVWVAATGVLSA
GLAVLSSFGLMFYIGIPFVITVANCPFLILGIGVDDMFIMVSNWQQTNVKDPVEKRMAHT
YKEAAMSITITTLTDVLGFYIGLTSDFLSVQYFCLYTSTAIIFCYIYNVTFFGAFLALNG
RRERSNRHWLTCIKIPSENPKECSNGYSMCCVGGNYDKATGTEKEQPINNFFKKYYGPFL
TKPWTKVIVIFIYAGYLAASIYGCFQIQQGIDLRDLAADDSYVIPYYNNDRKYFSTYGPN
VMVIVSEKFPYWDKNKRSELHSCMDDFKKLQFITDDLYTSWLDYYEGYARSTHLNIDDEI
VFSANLFLFLNLYPDFKQDVNFTSNAIHASRFFIQTVHIVNASMEIEMVNSLKETAEGCS
VVPLMVYHPAFIYYDQYAVIVSGTLQNIGVTTAVMLIIALLLIPNPLCSLWVTFSIVSVI
VGVTGFMALWDVNLDSISMIILVVCIGFTVDFSAHISYAFVSCKN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgggctgccaacgtacagactgcattgagaagcccttgtcgaatctctttgagaaattt
ggacgaattgttggcacctacccggtctggttttttgttataactctaatagtatccgga
attctgggaggagggttttattttctgaaagacagggaggataatgacattgaacgacaa
tttacaccgaggagtggaccctcaaagattgctagggcctttgtcaaagagaactttcca
aatgacaacgcagagttctcaagccagaggctctatgaagaagggaattacgcatcaatc
attgtggtatccaatgacaaatcaaatattctaagcacagaacatttgaagaacattatc
aaagtgaacgataaggttaaagatatctcagttgatgtagaccaaagggagttgaagttc
agccatttatgtgcaaagacaaatggacattgtgtgtcaaatgagattttagaaattatt
gacttcaatgcaagcagaattgagcagacaaacattactttccctctatatacacacaaa
tcaagacaaatctttctgggatctgcaataggtggggttcaagtaaatgtcaaaagtgaa
gtcaaaagtgccaaagctgtaaagcttttctacttcttggaaagtcactccaccagagct
gaggtatggctaaaagaattccaaaggatcctatcagatgagagagacaatgaaaatatt
aaggtgttttactatacatcacaatcgaagcaggaggagatagaaaaacacaccacagac
gggattccattgttctcagccacatatgcccttgccatcgccttctcagtcatatcttgc
ctaaggctggacaatgtgaggaacaaagtgtgggtggctgctactggtgtcctctctgct
ggcctggccgtgctgtcctcatttggattgatgttttacattggaattccctttgtcatt
actgtggcaaactgtcctttccttatactcggaattggtgtcgatgacatgttcattatg
gtgtcaaactggcagcagaccaatgtcaaagaccccgtggagaaacgcatggcacacacc
tacaaagaagctgccatgtctataaccatcaccaccttgactgacgtccttgggttttac
attggactcacgtccgactttctgtcagtacaatatttctgtctgtatacaagcactgcc
attatattttgctacatttacaatgtcacattctttggagctttcctggcattgaatggg
aggagagaaagaagcaacagacactggttgacttgcataaagatcccatctgagaatccc
aaagaatgttctaatgggtatagtatgtgttgtgtgggagggaactatgataaagccact
gggacagagaaagaacagccaatcaataatttctttaagaaatactatggtccttttctg
acaaaaccatggaccaaagtaattgtaatctttatttatgctgggtatttggcagcaagc
atctatgggtgttttcaaatacagcaaggaattgatcttcgtgatttggcggctgatgac
tcttatgttattccgtattataacaatgacaggaaatacttctctacttatggtcctaat
gtcatggtaattgtcagtgagaaatttccatattgggataagaacaaacgatctgaactc
cactcctgcatggatgacttcaagaagcttcaatttattacggatgatttgtatacatcc
tggctagattactatgaaggctatgcacgaagtacacatttaaacattgatgatgaaatt
gtattcagtgcaaatttatttttatttctgaatttgtaccctgattttaagcaagatgtg
aacttcaccagtaacgctatccatgcttctcgattcttcatccaaacggttcatatagtc
aatgccagtatggaaattgaaatggtgaacagccttaaagaaacagcagaaggttgtagt
gttgtcccattgatggtttaccacccggcattcatctactatgaccagtatgctgttata
gtgagtggcaccctccagaatattggagtcacgacagcagtcatgttgattatcgccctt
ttactgattccaaaccctctctgttctctgtgggtgacattctctatcgtctctgtcatt
gtgggcgtcactggtttcatggcattgtgggacgtcaatctagactccatatccatgatc
attcttgttgtctgcattggtttcaccgttgacttctctgcccatatatcctacgccttt
gtctcatgcaaaaattga
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