Oncorhynchus gorbuscha (pink salmon): 124039174
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Entry
124039174 CDS
T07892
Name
(RefSeq) cadherin-7-like
KO
K06799
cadherin 7, type 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124039174
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Major cadherins
124039174
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_4
PH_3
Motif
Other DBs
NCBI-GeneID:
124039174
NCBI-ProteinID:
XP_046211037
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All DBs
Position
LG07:28042976..28178057
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AA seq
803 aa
AA seq
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MRWCGSGSVWRASALLALLLPLWELGCWGLISTSGASGTQNQAQHTAGGPWELLRRHKRS
WVWNQFFVLEEYTGEEPLYVGKLHSDVDKGDGKVKYVLSGEGSTSIFTIDENTGDIHATK
RLDREEQAYYTLQAQAVDRLTNIPVEPRSEFVVKVQDINDNEPKFLDGPYMAGVPEMSAL
GTTVVQVAATDADDPTYGNSARVVYSIISGQPYFSVDPKTGVIRTALPNMDREVKDQYVL
VIQAKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFSRKNYQYMVLESLPVASVVARVKALD
NDIGPNAEMEYRIMEDGPGVFNITTDEDTQEGVIILQKPLDFETKNSFNLRIEATNRNID
PAFVHLGSFSDTTSVKVTVEDVNEPPVFSTQLSKMVVSEDARVGISIGRVSAHDPDSSNS
AIRYSIDRNTDLERFFNVDALSGVISTAKPLDREVNSVHNLTILAMESHDPTQVGKGFAV
ITVLDINDNPPVFAIEYETLLCENAAPGQVIQTISAVDKDEPPSGHRFYFALPPSVAGNS
NFTLRDNKDNTASIVTKRGGFRRREQVLYRLPVLIVDSGSPALSSTNTLSVSVCDCDSDG
VAQSCGAVAYTLPAGLSTGALVAILGCIITLLVMVLLIVSMRRRKKEPLILEEERDVREN
IVRYDDEGGGEEDTEAFDMVALRNLNVIRDPKVRRDVTPDTPTFFPYPRSSSSLPVYKTL
PDNVVFREFIWDRLKDADVDPSAPPYDSLQTYAFEGNGSVAESLSSLESLSTDSEQNYDY
LSNWGPRFKKLADLYGDGKSVFS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggtgtggctcaggaagtgtgtggagagcaagtgctctcctggctctgctgctt
cccctctgggagctgggctgctgggggttgatctccacctctggggcctctgggacacag
aaccaggcccagcacactgctggaggcccatgggagctgcttcgcaggcacaaacgcagc
tgggtatggaaccaattctttgtcctggaggagtacacaggtgaagaaccgctgtatgtt
ggcaagctccactcggatgtagacaaaggggatggcaaagtgaagtacgtgctctccggg
gagggctccacctccatcttcaccatcgacgagaacacgggggacatccacgccactaag
cgtctggaccgggaggagcaggcctattacaccctgcaggcccaggccgtggaccggctc
actaacatccctgtggagcccaggtcagagtttgttgtcaaggtccaggacatcaatgac
aatgagcccaagtttctggatggaccctacatggcaggggtaccagagatgtcagcactg
ggaacaacggtggtccaagtggcggccacagatgcagatgaccccacatatgggaacagt
gccagggtggtctacagcatcatcagcggacagccttacttctcagtcgacccaaaaaca
ggcgtcatccggacggcactgcccaacatggaccgagaggtgaaggaccagtacgtgttg
gtcatccaggctaaagacatggtgggccagatgggcggcctctccggcaccacctctgtc
acggtcaccctcactgatgtcaatgacaacccgccacgcttctctcgtaagaactatcag
tacatggtgctggagtccttgcccgtggcgtccgtggtggccagggtcaaggctctggac
aatgacataggccccaatgcagagatggagtataggatcatggaggacggacctggggtg
ttcaacatcactacagacgaggacacgcaagagggcgtcatcatccttcaaaagccttta
gactttgagaccaagaacagctttaacctgcgaatcgaagccaccaatcggaatatcgac
cctgcgtttgtgcacctgggttcgttcagcgacaccacgtcggtcaaggtgacggtggag
gacgtgaacgagccgcctgtgttctccacacagcttagcaagatggtggtctccgaggac
gccagagtgggcatctccatcgggagggtctccgctcacgaccctgactcctccaacagt
gccatcaggtactccatagacagaaacacagacctggagcgtttcttcaacgtggatgct
ctgagtggggtcataagcacagccaaacccctggatcgagaggtcaactctgtccacaac
ctcactatccttgccatggaaagccatgatccaacccaggttggaaaaggttttgctgtc
attacggtgctggacatcaatgacaaccctccggtatttgccattgagtatgagaccctc
ttgtgtgagaatgccgctcctggacaggtcatccagactatcagcgctgtggacaaggat
gagcctcccagtggtcatcgcttttactttgccctgcctccatctgtggccggcaactcc
aacttcactctccgagacaacaaagacaacacggcgtccatcgtaacgaaacgtggagga
ttccgaagacgggagcaggtgctgtaccgactgcccgtgttaatcgtagacagtgggagc
cccgcgctcagtagcaccaacaccctatcagtgagcgtgtgtgactgtgactcggacggc
gtagcccaatcatgtggggcggtggcgtacacacttcctgctggcctcagtacaggggcc
cttgtcgccattctgggctgcatcattacactcctggtgatggtgctgctgattgtgtcg
atgcgtcggaggaagaaggagcccttgatcctggaggaggagagggacgtgagggagaac
atcgtccgctacgacgatgaaggtggaggagaggaggacactgaggccttcgacatggtg
gccctccgcaacctcaatgtcatcagagaccccaaggtccggcgagacgtcacccctgac
acccccaccttcttcccctacccgagatcctcctcctcgcttcccgtctacaagacccta
ccggacaacgtggtgttccgagagttcatttgggaccggctgaaggacgcagatgttgat
ccatcagctccgccgtatgactctctgcagacgtacgcctttgaggggaatggttcggta
gctgagtcgttaagctccctggagtcactaagtacagactcagagcagaactacgactat
ctcagcaactgggggccgcgcttcaaaaagctagccgacctctacggcgacggcaaaagc
gtgttctcatag
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