KEGG   Oncorhynchus gorbuscha (pink salmon): 124039183
Entry
124039183         CDS       T07892                                 
Symbol
chmp4c
Name
(RefSeq) LOW QUALITY PROTEIN: charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144  Endocytosis
ogo04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124039183 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    124039183 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124039183 (chmp4c)
   03400 DNA repair and recombination proteins [BR:ogo03400]
    124039183 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124039183 (chmp4c)
Membrane trafficking [BR:ogo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    124039183 (chmp4c)
DNA repair and recombination proteins [BR:ogo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    124039183 (chmp4c)
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124039183 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   124039183 (chmp4c)
SSDB
Motif
Pfam: Snf7 Kinesin_assoc FapA
Other DBs
NCBI-GeneID: 124039183
NCBI-ProteinID: XP_046211050
LinkDB
Position
LG07:complement(31734225..31737067)
AA seq 235 aa
MSKISKLFKGSSSSSSSSHYPSSSKSKHGHRSRTGPTPQEAIHKLRETEAMLAKKQDFLE
NKIEQEIMIAKKNGLKNKRAALQALKRKKRFEQQLTQIDGTLSTIEFQREALENANTNTE
VLKTMGYAAKAIKGVHQNMDLDKIDSLMQDITESQEVAQEICDAISRPFGDAFDEDELLA
XELELEESMTNMGRVPSVPTAKLPTKLPSTRPSRRTPSKKRAEDDDMQMLAAWAV
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcaaaatttctaaattgttcaagggaagctcaagttcgagctcttctagccactat
ccaagctcttcgaagtcgaaacatggccatcggtctcggacaggacctaccccgcaggag
gccattcacaaacttcgagaaacagaggcgatgctggcgaaaaaacaggacttcttggaa
aataaaattgaacaagaaattatgatagcaaagaagaatggcctcaagaataaacgtgcg
gccctccaggcactgaagaggaagaagcgctttgagcagcagctcacccagattgacggg
accctctccaccatcgagttccaaagggaggcattggagaatgccaacaccaacactgag
gtcctgaagaccatgggctacgctgccaaggccatcaagggggtccaccagaacatggat
ctggataaaattgactctctgatgcaggacatcactgagtcgcaggaagtggcccaggag
atctgtgatgctatctcccgacctttcggagatgcatttgatgaggatgagctgttagct
ngggagctggagctggaggagagcatgacgaacatgggcagagtgcccagtgtgcccacc
gccaagctgcccaccaagcttccctcaactcgacccagccggcgcactccgtccaagaag
agggcagaggatgatgacatgcagatgctggcagcctgggcagtgtaa

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