Oncorhynchus gorbuscha (pink salmon): 124039367
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Entry
124039367 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-related family member 3-like
KO
K16503
cadherin-related family member 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124039367
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Cadherin related
124039367
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Mu-transpos_C_2
Motif
Other DBs
NCBI-GeneID:
124039367
NCBI-ProteinID:
XP_046211320
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Position
LG01:complement(9322729..9331683)
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AA seq
851 aa
AA seq
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MLLRGYLTREMDKDFKLLSLTLGMWMIREVSLIGVPGTARLAENSKDGTVTYSFQVALSP
GASLASGYPRILNSDPLTNQFTVSMINTNKAQVTVTGTTNLDFETSPNSFVLQILAVDST
KDLALQRFTVILTDLNEPPVFLDEESVLYVLEKSPPGQINRPTVSDPENQPVTFTLTPSN
TEFRIDVGSGFLTTTKQFNYLTDPRSYAFNLTVSDGNNSVSRTLVINIVNRNDDKPHTIT
DFTVSEELSPGFIVTNITAVVPDDSLYLIYSIGTNNYLAIHRYTGLVTIANRMDRDSAPL
REDPVITVLVTATSSPSAPPFNTITLTNTVTLTITVTDINDNPPICTPDAQRVAVSETEK
PGALVTTVTCTDNDVETAFREFLFTGLSCLGCANRFALEPTVSNQIVLKGNLDLEDPSNL
LDGNEYSLLAVAEDKDESNLKGSAYFYVTVTPVNEFPPVFSPPSYFYRISELLGRGTVIG
SVKATDLPAPGVRYSLISGGGTVGLSNIFSLDPKLGSLALLTRPDYPDLQPDIIPNEVTI
NITEANDEPPLCGPNQTHLIVPTDLRTGSNIQSFIMTWSDRDSPSASSIYSISGASNLNH
HFVFSPSSGTNVTRLFLKEPFDYQCGLDRVWPYRSYMLTTIGALISLNNHQSVKQILYNA
LKPSAGSVPRGLTQTGTVIINIRVVDPDLTTVTTTTIPRVTYITVTENTYSIDDWYIWFV
IALGTMLLLGLLSYLLYHLCGKLYKALKHRDCSCCVPRPREDQEVLIPEPTPPKREILME
VIKINTVFDGEEVDPVTGRVYEYNSKSGARRWKDVTTVSESVPMIQPESSSMVILPNHRL
GVGGLALANQK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgagaggatacctgacgagagaaatggacaaggatttcaaactcctgagcctg
accctgggcatgtggatgatacgagaggtttcgttgataggcgtgccaggcacagctaga
ctggcagagaacagcaaggatggcactgtgacctacagcttccaggtggctttgtcccca
ggtgccagcttggcatcaggataccccaggatactcaactctgaccccctcaccaaccaa
ttcactgtgtctatgatcaacactaacaaagcacaggtgacagtaacaggtaccaccaac
ctggattttgagacgtcacccaacagctttgtccttcaaatcctcgctgtggacagtacg
aaggacctggctctccagagattcacagtgatcctaactgatctcaacgaaccccctgta
ttcctagatgaagagtctgtcctgtatgttctggagaaatccccaccaggacagatcaac
aggccaacagtctctgatccggagaaccagcctgtgacttttacactgaccccgtcaaac
acagagtttcgtattgacgttggctcaggattcctgactacaactaaacagttcaactac
ctgactgaccccagaagctatgccttcaacctgacagtgagtgatggaaacaacagcgta
tccagaacactggtcatcaacatcgtcaacaggaacgatgataaacctcatacaatcaca
gacttcacagtctctgaggagctgagtccagggtttatcgtgaccaacatcacagcagtg
gtgcccgatgactccttgtacctcatctacagcatcggcaccaacaactacctggctata
cacagatacactggcctggtgactatagccaacaggatggaccgtgactcagctcctctc
agggaggaccccgtaataacggtccttgtgacagccacctccagcccctctgctcctccc
ttcaacaccatcactctgaccaacaccgtcactctgaccatcaccgtcacggacattaac
gacaaccctcccatctgcaccccagacgcacagagggtggcagtgtctgagacggaaaaa
cccggggccctggtcaccacggtaacgtgtacagataatgacgttgagacggccttcaga
gagttcctgttcactggcctgtcctgtctgggctgcgctaaccgctttgctctggaaccc
actgtatccaatcagatcgtactcaaaggaaacctagaccttgaggatcccagtaacctg
cttgatggtaatgaatacagtctgttggctgtggctgaggataaggatgagtccaaccta
aaaggtagtgcatacttctatgtgacggtgacacctgtgaatgagtttccccctgtgttt
agccctccatcgtatttctacagaatctctgagcttcttggacgtgggacggtgatagga
tcagtgaaagctacagacctccctgcccccggcgtccgttactccctgatctctggtgga
ggaactgtgggactgtctaacatcttctccctggaccccaagctggggagtctcgcccta
ctgacccggccagactacccagacctacagcctgacattattcctaatgaggtcactatc
aacatcacagaggccaatgacgagcctccactgtgtggccccaaccagacacatctaata
gtccccacggacctgaggacaggctccaacatccagagcttcatcatgacctggtcagac
agggactccccttcagcctcctccatctactccatctcgggggccagcaacctgaaccac
cattttgtgttctcaccttcctctggcaccaacgtcaccaggctcttcctgaaggagccc
tttgactaccagtgtggcctggaccgggtctggccctacaggtcatatatgctaactact
attggtgctcttatcagtctgaacaaccatcagtctgtcaaacagatactgtacaatgca
ctcaaaccatcagcagggtctgtgccgagaggtctgacccagactggcacagtcatcatc
aatatccgagtagtggaccctgacctcaccaccgtcaccactacaactatacctcgtgta
acatacatcaccgtcacagagaacacgtacagcattgacgactggtatatatggtttgtc
attgctctggggaccatgctactgcttggtttactctcatacctgctgtatcacctctgt
gggaagctctacaaggctcttaagcacagggactgctcctgctgcgtacccaggccccgg
gaagaccaggaagtactgatcccagaaccaacacctccaaagagggaaatattaatggaa
gtgatcaagatcaacactgtatttgatggagaggaagttgatcctgtcacagggagggtg
tacgagtacaacagtaagtctggagccagacgctggaaggacgtcaccactgtgtctgaa
tctgtccctatgatacagccagagagcagcagcatggtcattctgcccaatcacaggcta
ggagtgggagggctagcactggccaatcaaaaatga
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