Oncorhynchus gorbuscha (pink salmon): 124039450
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Entry
124039450 CDS
T07892
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124039450
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124039450
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124039450
NCBI-ProteinID:
XP_046211375
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Position
LG07:5157693..5260355
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AA seq
1119 aa
AA seq
DB search
MQLTKEVARQNSSYKCVIEDATSSHQLTAKTDVLLAATNLFEWARGGDVSQLEGLVRRNP
GVLREQDDSGASLVHHAAGAGNTPVIRFICSITHRDEWNLYDDEGSMPLHWAVERNQPES
CRALLELGVEPNVLNKALMSPLHLAVSHQHNHLVKLLLSHYKTESNLEGCLGNTPVMLAC
SINNTEALSILLKHGARLCSQNKLGHFAIHTAAFAGAKKAMEVILKAGEEMGHSIEEHIN
FLDESCSSPLHMAVRGGNVDVIKFCIQKGAKIDQQQVDRSTALHFACSQGATEAVKLMLS
SYSRVDSIINLSDGACQTPLHRSTIFDHKELAEYLISKGADIDYIDCKGLSPLLLATNCG
AWRSVALLLSKGANVNIKDKSGCNFLHLAILQPKGLKNLTGDILQHSSMMDLLSTEDNEG
CTPLHYACRLGIHESVKNILVLQVSLDRKSKDKKSALHFAAQYGRINTCQRLLETITESR
LLNEGDDRGLTPLHLASRGGHAKVVELLLRKGALFHSDYKGWTCLHHAAAEGYTQTMKIV
LGTNIKLLDKLDEDGNTALHVAAREGQVAAVRLLLQRGAEISLNKSHASFFHEALQHRRK
DVVNAIIDSDRFSDTLRTFKHDAGQRCPVLELVDLLPESCKHLLDCCIRESKDDDNSPDY
HIEYNFQWLQAPIALKKHAKTDESLKVQPLAALNAMVNNNRIELLTHPVCKKYLEMKWVA
YGSIAHLLNLSVYLLGLLPLTHLIVSLRPSLDYTGPDNNTAVTMVPISFREQNSFLSICM
VMVLVMNIYSMGKEVMQMYHQRLSYLKDISNIQDWFTIILSLLFIIALFFNAEGSWHWQA
GALAIIMSWVNFLLYLQRFEHFGIYVVMFREIARTLFKILLLFFFLMLAFALVFYALMLN
QEEFERLDLSVIQIFVMMVGELNYQSNFLDMYQHNKFPFPFITFYMLVIFIIFMPILLMN
MMIGLAVGDIAEVQRSATLKRIAMQIELHTNLEEKMPYWLLKRVDQSSITIYPNRKCSKL
WSRGEANEVRTHLLTNSSTSTSVEAKLHKQKQRLKEISCVLEKQHDLMKLMIQKMEITSE
ADEHDGPTEVKGHRQMSNWGRAKCSKWIPLIKAIKNKNV
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaccaaggaagtggcacggcagaacagttcctataagtgcgtgattgaagat
gcaacatcgtctcatcaactcactgcaaaaacagacgttctgctggcagctacaaacctg
tttgagtgggctcggggaggtgatgtgtcccagctggagggcttggtgaggaggaaccca
ggagtactgagggaacaggatgactctggtgcctctctggtccaccacgctgctggtgca
ggaaacacccctgttatcaggttcatctgcagcatcacacacagagacgagtggaacctg
tatgatgacgaggggtcaatgccgcttcattgggccgtggagaggaaccagccagagagc
tgcagggctctgttagagctgggggtcgaacccaacgtcctcaacaaggccttgatgtct
cctctacacctggcggtcagccatcaacacaaccacctggtcaagctcctcttgtcccac
tataagacagagtctaacctagaaggatgtctgggcaacactcctgtcatgttagcctgc
tccatcaacaacaccgaggctctgtccatactgctgaagcacggggcacggctatgtagt
cagaacaagctaggccacttcgccatccacacagctgccttcgcaggcgctaagaaagcc
atggaggtcatcctcaaagctggagaggagatgggtcattccatagaagaacacattaac
ttcctggatgagtcctgcagtagtcctctgcacatggcggtcaggggaggaaatgtggac
gtcattaagttctgcatccaaaaaggagctaagattgatcagcaacaggtggaccggtcc
acagctctacattttgcctgttcccagggagctacagaggcagttaaactgatgctgtct
tcttacagtagagtggacagcatcattaacctgtctgatggagcctgccagacacctcta
cacaggtcaaccatattcgatcacaaggagttggcggagtacctcatttcaaagggtgca
gacattgactacatagactgtaagggtctttctcccctgctgctggctactaactgtgga
gcctggagatctgtggctcttctgttgtccaaaggtgccaacgtcaacataaaggacaag
tcgggatgtaacttccttcacctggccatcctgcagcccaaaggcctaaagaacctcaca
ggagacatcttacagcacagcagcatgatggatctgttgagtactgaagacaacgagggc
tgtactcctctccactacgcctgcagactgggtatccacgaatcggtcaagaacatcctg
gttctacaggtctctctggaccgcaagtccaaggacaagaagtcagccctgcacttcgct
gcccagtatggtcgtattaacacctgccaacgtctgctggagaccatcacagagtcccgc
ctgctgaacgagggggatgatagaggcttgactcccctacacctggcctctcgaggtgga
cacgccaaagtggtggagctgctgcttcgtaaaggagctctctttcacagtgattacaaa
gggtggacttgtttacaccatgcggcggcagaaggatacacccagaccatgaagatcgtc
ctgggcaccaacatcaaactactggacaagctggatgaggatgggaacacagcactgcac
gtggcagccagggagggacaagtagctgcagtgagactgttgctgcagagaggggcggag
atcagcctcaacaagagccacgcctccttctttcacgaagcactgcaacacaggaggaag
gatgtggtcaatgccattattgacagtgacaggtttagtgacaccctgaggacgttcaaa
catgatgctggccaacgttgtccagtgttggaactggttgacttgctgccagagtcttgc
aagcacctactggactgctgcatcagagagtcaaaggatgacgacaacagtcctgactat
cacattgagtacaatttccagtggcttcaggcaccgatagcactaaagaaacacgcaaag
actgacgaaagcctgaaggtccagcccctcgccgctctgaatgcgatggtgaacaacaac
cgcatagagctccttacacaccccgtctgcaagaaatacctggagatgaagtgggtggcc
tacgggagcattgctcaccttctgaacctgtccgtgtacctgctgggtctgcttcctctc
acccacctcatagtgagcctgagacccagcctggactacaccggccctgacaacaacaca
gctgtcaccatggtgcccatttccttccgagagcaaaactccttcctgtccatttgcatg
gtgatggtactagtcatgaacatctactccatggggaaggaagtgatgcagatgtaccat
cagcgtttgagttacctgaaggacatttctaacattcaggactggtttacaatcatcctc
tctcttctcttcatcatcgccctgttcttcaatgctgaggggtcctggcactggcaggct
ggggcactggccataatcatgtcatgggttaacttcctcctctatctccaaaggtttgaa
cactttgggatctacgtggtgatgtttcgggagattgcaaggacattgtttaaaatccta
ctgctattcttctttctgatgctggcctttgccttggtcttctatgccctcatgctcaac
caggaagagtttgagcgactggacttgtcagtgatccagatctttgtgatgatggtcggg
gaactgaattaccaaagcaattttctggacatgtaccaacacaacaaatttccatttccc
ttcatcactttctacatgttggttatatttatcatcttcatgccgatcctgctgatgaac
atgatgattggattggctgtcggtgacatcgctgaggtacagagaagtgccactctgaag
agaatagccatgcagattgaactccacaccaatctggaggagaagatgccatactggttg
ttgaagagagtggaccagtcatccatcaccatctatcccaaccgcaagtgctccaagctc
tggagtcgaggagaagccaacgaagtgcgtactcatctattgaccaactcatcaacttca
acctctgtcgaagccaaactacacaaacagaagcaaagactgaaggagatatcctgtgtg
ctggagaagcagcacgacctgatgaagctgatgatccagaagatggagatcacctcggag
gcagacgaacatgacgggcccacagaggtcaaaggtcacaggcagatgtcaaactggggt
cgagccaaatgctcgaagtggatcccgctgatcaaggcaatcaagaacaagaacgtttga
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