Oncorhynchus gorbuscha (pink salmon): 124039456
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Entry
124039456 CDS
T07892
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124039456
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124039456
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
124039456
NCBI-ProteinID:
XP_046211400
LinkDB
All DBs
Position
LG07:complement(6904850..6922743)
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AA seq
548 aa
AA seq
DB search
MCCWQEKCKKKTVVVYNDILAMDGMGDVAVGVKRGSDELMSASVYNSGSDMSSIGDVTAN
GSDSKSNGSDSKKLRVEDRMEAPPSRVLHIRKLPNETSESEVIALGLPFGKVTNILTLKG
KNQAFLELGTEEAAITMINYYSTVTPHVRNVPVFIQYSNHKELKTDSGNQRAQAVLQAVS
AVQGGGTPASGSVVDLTAASSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNN
QFQALLQFNDPPTAQQAKIALDGQNIYNSCCTLRIDYSKLVNLNVKYNNDKSRDYTRPEL
PAGDGQPAMDPNMAAAFQGKDSNSLLGGLSPLNAAAAAAAAAGRVALSGHTGASGVLLAS
NLNEEMVTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMADANQAQLAMSHLNGQKMHGK
PIRVALSKHTSVQLPRDGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPTTTLHLSNIP
TDVSEEDLRLLFSNAGGTVNAFKFFQDHKMALLQMSTVEEAIQGLIDLHNYNMGDNHHLR
VSFSKSTI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgttggcaagagaagtgcaaaaaaaaaactgttgtcgtttataacgatattcta
gcaatggacggtatgggagatgttgcagttggtgtgaagagaggatcagatgagctgatg
tcagccagtgtctacaacagcggatctgacatgagcagtatcggtgatgttacagccaat
gggagcgacagtaaatccaatgggagtgacagtaaaaagctgagagtggaagaccggatg
gaggcccctccgtctcgtgtgctgcacatcagaaaactgcccaatgaaacttcagaatcg
gaggtcattgccctggggttacctttcgggaaggtcacaaatatcctgacgcttaagggg
aaaaaccaggctttcttggagctgggcacagaggaagcagcgataaccatgatcaactac
tactctactgtgacaccgcatgttcggaacgtccccgtgttcatccagtattccaaccac
aaagaactcaaaacggatagcggaaaccagcgggcccaggcggtcctgcaggcggtgtca
gcggtccaaggaggaggtactcctgcgtcgggctccgtcgtagatctaaccgctgcgtcc
agccctgtgctcagaataatcatcgacaacatgttctatccagtcactctggatgtgctg
cagcagatcttctcaaagttcggaacagtcatgaagatcatcacattcaccaagaacaat
cagttccaggctctgctgcagttcaacgacccacccaccgcccagcaagccaaaatagcc
ctggatggtcagaacatctacaactcgtgctgtacgctccgcatcgactactccaagctg
gtcaacctgaacgtgaagtacaacaacgacaagagccgtgactacacccggccagagctc
cctgcaggggacggccagcctgccatggaccccaacatggctgctgccttccaaggcaaa
gactccaactctctgctcggtggcctgagcccgctgaatgctgccgcggcggcggctgct
gctgcaggaagggtggctctgtccggtcacactggagccagtggcgtgctcctggcctcc
aacctcaacgaagagatggttacgccccaaagtctgtttactctcttcggggtgtatggt
gatgcccagagggtgaagatcctctacaataagaaagacagtgctctgatacagatggct
gatgccaaccaagcccagctagccatgagtcacctgaatgggcagaagatgcatgggaaa
ccaatcagggtggctctgtctaagcacacctcggtgcagctgcccagggatggactggat
gaccagggcctcaccaaagacttcaccaactcgcccctgcaccgcttcaagaagcctggc
tccaagaacttccagaatattttccctcccaccactactcttcacctctccaacatccca
acggacgtttccgaggaagacctccgactgctgttctccaacgccgggggaaccgtgaac
gcattcaagttctttcaggatcacaaaatggcactgctccagatgtcaacggtggaggag
gccatccagggtctgatcgacctccacaactacaacatgggtgacaaccatcacctgaga
gtctccttctccaaatccaccatctaa
DBGET
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