Oncorhynchus gorbuscha (pink salmon): 124039491
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Entry
124039491 CDS
T07892
Name
(RefSeq) zinc finger homeobox protein 4-like isoform X1
KO
K09380
zinc finger homeobox protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124039491
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
124039491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2_4
Homeobox_KN
zf-C2H2_ZFHX3
zf-C2H2
zf-Di19
zf-met
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
124039491
NCBI-ProteinID:
XP_046211465
LinkDB
All DBs
Position
LG07:12777855..12972585
Genome browser
AA seq
3097 aa
AA seq
DB search
MGGDQDQTELPATAPLSFCPQVINTFHIASSLGKAFPGDPVAKLSFPNTSAFVGASGPVL
HSFRVYDLRHKNDKDYLTVDGAAKNSCVSKDVPNNVDLSKFQSCVSDGQRKPVLMCFLCK
LSFGYSRSFVTHAVHDHRMTLNEQEQKLLSNKHVSAIIQGIGKDKEPLISFLEPKKPTNS
VLPHFSTATSFLGPDSGFHGLWNAFHAENTDSLQAGFAFLKGSASSNPANQTPRTPPMPK
AETNPNLGGVTGTSLRTPASSDSLIHSSPMATDLERDFPESDCEGFPPCTLHPNGPGSDL
NSYPLIKRERAAEGGQSPEEDRDDIYFNGGVEIETEDDEPAGDSTSSKDFPILNQSICHL
SNSVLKYSGNKGPLSSSSSSREEMEKNQINSDLARDRDSSNDSSSEVLAGPDGSSPSSHL
MMPRDEDSPGPLHQHGGNPGTPGTPGTPGLGEGSPGSCIECPKCDTVLGSSRSLGGHMTM
MHSRNSCKTLKCPKCNWHYKYQQTLDAHMKEKHPESGGSCVYCRTGQAHPRLARGESYTC
GYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQTLQNGGTEPQYTHTHTHSHSHTHSPC
HSHAKPVPSGSLAGGCGTPSPSKPKQKPMWRCEVCDYETNVARNLRIHMTSEKHMHNMML
LQQNMKQIQHGLHLGLAPAEAELYQYYLAQNIGLTGVKLESPGPDAQMIINPFQLDPNTA
TALSSGLVNNDLSAELRLASGQLMADDLSVLSCGSGELSPPISDPSVHIYQCSICSRFTS
DSLEVLGAHVNAERTLPEDEWRGIVGDVYQCKLCTYNTQLKANFQLHCKTDKHMQKHQLV
AHIKEGGKANQWRLKCVAIGNPVHLKCNACDYYSNSVDKLRLHATNQRHEAAIRLYKHLQ
KQEIACGSEQCVYYCALCDYSTKACLNLVQHARSPRHQQNEGLRKLQLHQQGLGGEEDGL
SLHQLYHVKDCPKQQEVPCDDEDALPPRSSSRPGINDSEQADRQHRVNSLSKESPGSNTV
GKCSMLLERQNDSPPKRPKSAEGKTSASEQQLQQCPYCNYRSKDANRLQLHVVSQHSMQQ
PVICCPLCQDVLSNKIHLQLHLTHLHSVAPDCVDKLLMTVAGPDVMVPNSMMYPSPGQDN
ALSLMEASATLSETSGKPTGNRSKDQMNSTGQDKSEVDLLREELKPPKEGSEAPDWKTSG
GVGQDRKSPDSLQDHLNDLQRRQQQQLSVSDRHIYKYRCNHCSLAFKTMQKLQIHSQYHA
IRAATMCSLCQRSFRTFLALQKHLENGHPELSEAEVQQLCGSLPVNGDFVPESEARAYEE
AHQAFEQEMDKDDELDLEEKASSTGSDSSLLLDDMGAETKRTLPFRKGPNFTMEKFLDPS
RPYKCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQEASSPVSPETNNNADNKPFKCNIC
NVAYSQSSTLEIHMRSVLHHTKVRTAKTETSSSSSCTGIGNPSGMAPSSIPVPTGQGNNA
NSETARSVMPLVNKENTVDAKEANNSNNAKHTTDHVSALQSHQNAQSQAQLQMQLQHELQ
QQAAFFQPQFLNPAFYPQFGMTPEALLQFQQPQFLFPFYIPGAEFNLSPELALHSATAFG
MPGLTGSFLEDLKQQMQQQHQLQQDQAQQQQQQQQQQQQASQLQLQQQKKQQPQSHKPKM
EPNAVSDIHMSRESEEHLEKQESKAKMENGADGVSEGGKDKKDKKSKFPEPLIPPPRIVS
GARGNAAKALLENFGFELVIQYNENRQKNQKKNREGEEQKQQPQQQQLEINNGKLECGMC
GKLFSNMLILKSHQEHIHGQFFPYGELEKFAQQYREAYDKLYPINPPSPETPPPLPLLPP
PSPVPVTTQQPPCTSTNKPQIKAPSPAPNQAPQTQPPPPPPPPPPPSASPQVQPSIPLDF
SLFPPLLMQSIQHQGLHPQLTLQLPTMDSLSSDLTQLCQQQLGLDPNFLRQSQFKRPRTR
ITDDQLKVLRAHFDINNSPTEEQIQEMADMSSLPQKVIKHWFRNTLFKERQRNKDSPYNF
NIPPITTLEDIRLESQYSTLEYYRTDATMNKRSSRTRFTDYQLRVLQDFFDTNAYPKDDE
IEQLSTVLNLPSRVIVVWFQNARQKARKSYENQADAKENEKKELTNERYIRTSNMQYECK
KCSVVFPRIFDLITHQKKTCYKDEDEEGNEDNQSEEYMDIGEPCPAKHPESSKHHHGTAT
SSGSSSPLMPSPHSNLEKISHKPEPPSEPKPKEPEPAPSPVMIKSLPDPRPSKASTPQPP
PQKTLQPQMSRPHTQPQSATIPSSPLSLALSSLTNSLSPQMLQYQCDQCKIAFPSIELWQ
EHQHMHFLAAQNQFLHSQFLERPMDMPYLIFDPNNPLMTSQFLSGGLQMPTQSSSGLSSG
PCSGSMKRKLDEKEDGSIEKDNGNMTEEQHRDKRLRTTITPEQLEILYDKYLLDSNPTRK
MLDHIAREVGLKKRVVQVWFQNTRARERKGQFRALGASQSHKKCPFCRALFKAKSALDSH
IHSRHWHEAKQAGFSLPNSPMMNQDDGGESPHKYNFFEFPQLPTKIEPNEYELPAASSTP
VKQSEAQLKNLMSPSSVKAENCDDSEGLNINSAEGSSYNINNKMDFDETSSINTAISDAT
TGDEGNNNELESLMANGGDKLACDSKSNLAQSSDGGDDRFPFSMVSPSLSYSGKDGDSCS
YSYSYYSSRDDDMDDNNDQSETSSLTDPSSPSPFGSGNPFRSGKGSGSGGERPGHKRFRT
QMSNLQLKVLKACFSDYRTPTMQECEMLGSEMGLPKRVVQVWFQNARAKEKKFKINIGKP
FMISQGGPDGPQPECTLCNVKYTARMSIRDHIFSKQHIAKVQETLVNQVDREKDYLAPTT
VRQLMAQQEMDRLKKAGSDGLSNLAAQHLQTAVNHNNALHGLSLPSGYPGISGLPPVLLP
GVTGPSSLPIYPPNTPALASPGAGMLGFPNPATPSPAMSLSTTPNKNLLQTPPPPPPLPP
VSSTPLTSTNHIEQHSKYQERESNNTAAAAAAAAARNLRRSRTTRRRPRKEKWRTAAVYR
PPTSATTKRGRSRLRPRANQDVRVIWMPLNYRLFRMP
NT seq
9294 nt
NT seq
+upstream
nt +downstream
nt
atggggggggatcaggaccagacggagctgcctgcaactgcacccttgtccttctgccca
caggtcatcaacactttccacattgcgtcatccctcgggaaagcattcccgggtgaccca
gtggcaaaattgtcgttcccaaatacctcagcatttgtaggcgctagcggcccggtgttg
cacagtttccgcgtctacgaccttcgccacaagaacgacaaagactatttgacggtcgac
ggcgcagccaaaaactcctgtgtgtccaaagatgttcccaacaatgtggacttgtccaag
ttccagagttgtgtgagtgatggacagaggaagccagtgctcatgtgtttcctctgcaag
ctgtcgtttggctacagccggtcgtttgtgacgcatgccgtccacgaccaccggatgacg
ctcaacgagcaggagcaaaagctcctaagcaacaagcacgtctctgccatcatccagggg
attggcaaggacaaagaaccccttataagctttctggaaccaaaaaaacccaccaactct
gtgctaccccacttctctactgccactagcttcctgggtcctgattcagggttccacggc
ctgtggaacgcgttccatgctgagaacactgattccctccaggccgggtttgctttcctg
aaagggagcgcgagctctaaccccgccaaccaaacccccagaaccccaccaatgccaaag
gccgagaccaatccaaatctcgggggtgtgaccggaacctccctcagaacccccgccagt
tctgattcccttattcactcatctcccatggcgactgacttggagcgggattttcccgag
agcgactgcgagggctttcctccatgcactttgcatcccaacggacccgggtcggacctg
aactcatacccactgatcaaacgtgagcgggctgcagaaggaggacagagtccagaagaa
gacagggacgacatttacttcaatggaggggtggagatcgagacagaggatgacgaaccg
gctggcgacagcactagtagcaaagatttccctattttaaaccaaagcatttgccacctg
tctaacagcgtgctgaagtacagcggaaacaaaggccccttgtcctcctcttcctcctcc
cgtgaggagatggagaagaatcagataaactcagacctagccagagatagagatagcagt
aacgactcatccagtgaagtcctggctggtccagatggctcttccccctcctctcacctg
atgatgccacgagacgaagatagtccgggacccctgcaccagcatgggggaaaccctggc
actcctggcacaccgggtacccctggactgggtgaggggtccccaggcagttgcattgag
tgccctaaatgtgacacggtcctaggctcctcccgatccttaggagggcacatgaccatg
atgcactctcgtaactcctgcaagacactaaagtgtcccaagtgtaactggcactacaag
taccagcagacactggacgcccacatgaaggagaagcacccagagtctggagggtcctgt
gtgtactgtcgtactgggcaagctcacccacgcctggccaggggagagagttatacatgt
ggatacaagccgttccgctgcgaggtgtgtaactattccaccacgaccaagggcaacctg
agcatccacatgcagtcggacaagcacctgaacaacgttcagaccctgcagaacgggggc
actgaaccacagtacacccacactcacacccacagccacagccacacccactccccctgc
catagccatgccaagcccgtgcccagcggcagcctggcggggggctgtggtaccccctcg
ccgtccaagcccaaacagaagcccatgtggcgttgtgaggtgtgtgactatgagaccaac
gtggcgaggaacctacgcatccacatgaccagcgagaaacacatgcacaacatgatgctg
ctgcaacagaacatgaagcagattcaacacggtctgcacctgggtctggccccggccgag
gctgagctctaccagtactacctggctcagaacatcggcctgaccggggtcaagctggag
agccccggcccagacgcccagatgattattaaccctttccagctggaccccaatacggct
actgcactcagctctgggctagtgaataatgacttgtctgcggagctgcgtctggccagt
ggtcagctgatggctgacgacctgtcagtcctctcctgcggcagtggcgagctctcccca
cccatcagcgacccatcagtccacatctaccagtgttccatctgcagccgcttcacctcc
gacagcctggaggtgctgggcgcccacgtcaacgcggaacgcaccctgcctgaggacgag
tggcgtggcattgtgggagatgtgtaccagtgcaagctgtgcacctataacacccagctc
aaggccaacttccagctgcactgtaagacagacaaacacatgcagaagcatcagctggtg
gcgcacatcaaggagggagggaaagctaaccagtggaggttgaagtgcgtcgccatcggc
aaccccgtgcatctgaagtgcaacgcgtgcgactactacagcaacagtgtggataaactg
cggctgcacgccaccaaccaaagacacgaggctgccattaggctgtacaagcacttgcag
aagcaggagatcgcgtgtggcagtgagcagtgtgtgtactactgtgccctgtgtgactac
tccaccaaggcctgtctgaacctggtgcagcacgctcgctccccgcgccaccagcagaac
gaggggctgaggaagctacagctccaccagcagggactgggaggagaggaggatggtctg
agtctacaccaactttaccatgttaaagactgccctaaacaacaagaagttccatgtgat
gacgaagacgctctgcctcctcgctcttcctccaggcctggcattaatgacagtgagcag
gctgacagacaacacagagtgaactctctgtctaaagagtctcctggatccaacactgtg
ggaaaatgttccatgctcctagagagacagaatgacagcccgcccaaaaggcccaagtct
gcagaggggaagaccagcgctagtgagcagcagctgcagcagtgcccctactgtaactac
aggagtaaagatgccaacaggttacagctccacgtggtatcccagcattccatgcagcag
ccggtgatctgctgcccactgtgccaggacgtcctcagcaacaagatccacctgcagctc
cacctcacacacctgcacagcgtggctccagactgcgttgacaaactactcatgactgtg
gctgggcctgatgtgatggtgcccaatagcatgatgtatccttcacctggacaagacaac
gctttgtctctgatggaagcttctgcaaccctctctgagacgtctggaaagcccacaggg
aacagatccaaggaccagatgaacagcacaggccaagacaaaagtgaagtagaccttcta
cgagaggaactcaaaccccccaaggaggggtctgaagctccagactggaagacgtctggg
ggggttgggcaggatcgaaagagtcctgactccctccaggatcatctgaacgacctccag
agacgccagcagcaacagctctcagtctctgaccgccacatctacaaataccgctgcaac
cactgcagcctggccttcaagaccatgcagaagctgcagatacattcccagtatcatgcc
atccgggcggccaccatgtgcagtctctgccaacgcagcttccggacattcttggcgctc
cagaagcacctggagaatggacatccggagctgagcgaagccgaggtccaacagctctgc
ggcagcctgccggtaaacggagacttcgtccctgagagcgaggccagggcctacgaggag
gcacatcaggcctttgaacaggaaatggataaagatgatgagctggacctggaagaaaag
gccagctcaacaggaagtgacagtagcttgttgctagatgacatgggagctgaaacaaag
cgaaccctcccatttagaaaaggccccaacttcaccatggagaagttcctggacccgtcc
cggccatacaagtgcacggtctgcaaggagtccttcacccagaagaacatccttctggtc
cattacaactccgtctctcacctgcacaagctgaagaaagttctccaggaggcctccagc
ccggtttcccctgagaccaataacaatgcagacaacaaaccattcaaatgcaatatctgc
aacgtcgcctacagccaaagctcaaccctagagatccacatgaggtctgtgttgcatcat
accaaagtcagaactgccaaaaccgagacaagcagcagcagcagctgtacagggattggg
aaccctagtggcatggctccatccagcatcccagtcccaaccggacaaggcaacaatgcc
aactcagaaactgctagaagcgtgatgccattggttaacaaagaaaacactgtagatgcc
aaagaagccaacaacagcaacaacgcaaagcacactactgatcatgtctctgcactgcaa
agccatcagaatgctcagtcccaagctcaactacagatgcagctccaacacgagctccag
cagcaggctgcctttttccagccccaattcctcaacccggctttttacccccagttcggc
atgaccccagaggctctgcttcagttccagcagccacagttccttttccccttctacatc
ccaggggcagaattcaacctgagcccagagctggctcttcactcagccaccgccttcggg
atgccgggcttgactggttctttcctggaagacctgaagcagcagatgcagcagcaacac
cagctacagcaggatcaggctcaacagcagcaacaacagcagcagcagcagcaacaagca
tcccagttgcagctccagcagcagaaaaagcagcaaccgcagagccacaagcccaaaatg
gagcccaatgctgtgtctgacatacatatgtccagagagtcagaggagcatctggaaaaa
caggagagcaaagccaagatggagaatggagcggatggagtcagtgagggaggaaaggac
aaaaaagacaaaaagtcaaagtttcctgagccgctgattcctcctccacgtatcgtgtca
ggagccagaggaaatgcagccaaggcccttctggagaactttggatttgagctggtcatc
cagtacaacgagaacaggcagaaaaaccagaagaaaaacagagaaggagaagaacaaaaa
caacaaccacaacaacaacaactggagatcaataacggcaagctggaatgtgggatgtgt
ggaaagctcttctccaacatgcttattctcaaaagccaccaagagcacatccatggacag
ttctttccttatggagagctggagaagtttgcccagcagtaccgagaggcctacgacaag
ctctaccccatcaaccccccttcccctgagactcccccaccactgcctctccttcctcct
ccctcaccagtcccagtgaccacccagcagcctccctgcacctccacgaacaagccccag
atcaaggccccatcccctgccccaaaccaggccccgcagacccagccaccacccccacct
ccccctcctccaccaccctccgcatccccacaggtgcagccttccatcccactagatttc
tccctcttcccccctctgttgatgcagtccatccagcaccaagggctacaccctcaactc
accctgcagctgcctacaatggactccctgtcctcggatctcacccagctttgtcagcag
cagctaggtctcgatccaaacttcttgaggcagtcacagttcaagcgccctcgaacccgt
atcacagacgaccagctcaaggtcctcagagcacactttgacatcaacaactcgcccact
gaggagcagattcaggagatggctgatatgtccagcctcccccagaaagtaatcaagcac
tggttccgtaacaccctcttcaaagagaggcagcgaaacaaagactctccttacaacttc
aacattccacctattaccacgttggaggatattaggctggagtcccagtacagtacactg
gagtactacaggactgatgccaccatgaacaaacggtcctccaggacaaggttcactgac
taccaactgagggtcctacaggacttcttcgacacaaatgcttacccgaaagatgatgag
attgagcagctgtccaccgtgctcaacctgccgtcaagggtcattgtggtgtggttccaa
aacgcccgccagaaggcccggaagagctacgagaaccaggcagatgctaaagaaaatgag
aagaaagaactgacgaatgagcgctacatccgcaccagcaatatgcagtacgagtgcaag
aaatgtagtgtggtgttcccacgaatcttcgacctgatcacccaccagaagaaaacatgc
tacaaggacgaggatgaggaagggaatgaggacaaccagtctgaggagtacatggatata
ggagaaccatgcccagccaagcaccctgagtcatccaagcatcaccatggaacagccact
agctcaggctccagttcacctctgatgccctcccctcactccaacctggaaaagatatcc
cacaagcctgaaccgccctctgagcccaagcctaaagagccagaacctgcaccttctcca
gttatgataaagtctctaccggaccccagaccctccaaggcctccacccctcagccaccc
cctcagaagaccctccagccccagatgtccagaccccacacccagcctcagtcagccacc
atcccctctagcccactctctctggccctttcctccctcaccaacagcctctctccccag
atgctccaataccagtgtgaccagtgcaagatagccttcccaagcattgagctatggcag
gagcaccaacatatgcatttcctggcagcccagaaccagttcctccattcccagttcctg
gaaaggcccatggacatgccctatctgatcttcgaccccaataaccctctgatgactagc
cagtttctgtctggaggactccagatgccaactcaaagcagctctggtttgtcctcgggt
ccctgctctggctccatgaagagaaaactagatgagaaagaggatggatccattgaaaaa
gataacggaaacatgactgaagaacagcacagagacaaacgtctcagaactaccatcacc
ccagaacaactagagatcctctatgacaaatacttgctggactccaaccccacgaggaag
atgctggatcacattgcccgtgaggtcggcctgaagaagagagtggtgcaggtgtggttt
cagaacacacgtgcccgagagaggaagggacagttcagagcattgggggcctcccagtca
cataagaaatgtcctttttgccgggcgctgttcaaggccaagtcagctttggacagccat
atccactctagacactggcatgaagccaaacaggcagggtttagtctgcccaatagccca
atgatgaaccaagatgatggaggtgagagcccacacaagtacaacttctttgagttcccg
cagctgcccaccaagattgagccgaatgagtacgagctgcccgcagcttcctcaacacct
gtcaaacaatctgaggcacagttaaaaaacttaatgagcccttcatccgtaaaagcagaa
aactgtgatgattctgaagggcttaacattaattctgcagagggctcatcctacaacatc
aacaacaaaatggactttgacgagacctcgtccatcaacacagccataagtgacgccacc
actggagatgagggcaacaacaatgagctggagagcctcatggccaacggaggggacaag
ctggcgtgcgacagcaagagcaaccttgcccagagctcagacggtggcgacgaccgcttc
cccttcagtatggtgagcccctccctcagctactccggcaaggacggagactcctgctcc
tactcttactcctactacagctccagagatgacgacatggatgacaacaacgaccagagc
gagacctccagcctgaccgaccccagctcccccagccccttcggaagtggaaaccccttc
aggtctgggaagggcagcggcagtggtggggagagaccaggccacaagcgcttcaggact
cagatgagcaaccttcagctgaaagtcctcaaggcctgtttcagtgactaccgcaccccc
accatgcaggagtgtgagatgctgggcagtgagatgggcctccccaagcgtgtggtgcag
gtatggttccagaatgcccgcgccaaggaaaagaagttcaaaatcaatattggaaagcca
ttcatgatcagtcaaggcgggccggacgggccccagccggagtgtactttgtgtaatgtg
aagtacactgcccggatgtccatccgcgaccacatcttctccaaacagcacatcgctaaa
gtgcaggagaccctggtcaaccaggtggacagagagaaggactacctagcacccaccacg
gtccgccagctgatggctcagcaggagatggatcgtctgaagaaggctgggagcgacggg
ctcagcaatctggctgcccagcaccttcagactgcagtgaaccacaacaatgcacttcat
ggcctcagcctgccctcaggctatcccgggatctctggccttccgccggtactacttcct
ggggtcaccgggccatcctcacttcctatttacccacccaacacacctgctttagcatct
cccggtgctggcatgcttggattcccgaacccagccaccccctctcctgccatgtctctg
agcactaccccaaacaagaatcttctgcagactcctcctcctcctccacctcttcctcct
gtttcctctacccctctgacttcaacaaaccacattgagcagcacagcaaataccaagaa
agagagagcaacaacacagcagcagcagcagcagcagcagcagcaagaaacctgcggaga
agccgcaccaccagaagaaggccaaggaaagagaagtggagaacggcggccgtctacaga
cccccaacgtcagcaacaacaaaaagagggagaagccgtctccggcctcgggcaaaccag
gacgtgagggtcatctggatgccgctcaactacaggctcttcagaatgccctga
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integrated database retrieval system
