Oncorhynchus gorbuscha (pink salmon): 124039545
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Entry
124039545 CDS
T07892
Name
(RefSeq) brother of CDO-like
KO
K20020
brother of CDO
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124039545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124039545
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Other
124039545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Ig_4
Ig_5
G6B
Motif
Other DBs
NCBI-GeneID:
124039545
NCBI-ProteinID:
XP_046211588
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All DBs
Position
LG07:complement(16291542..16350733)
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AA seq
1060 aa
AA seq
DB search
MSGTLDWTPWMRKRRARVLCALSAVLLCCLQGGATINGATEEVPVFTEEPLSVVQKLGGS
VILRCSTQPPSANISWRLNGRELVAGAVGELGVVLEPGTLLIPTLTNLTLGRYQCVASTN
AGALASVPANVTAAKLRDFEQDDQQDIEVDEGNTAVIVCHLPESQPKAQVRYSVKQEWLE
TSKGNYLIMPSGNLQIANATLDDEGPYKCAAYNPVTQEVKTSTSTDRLRIRRSTSEAAHI
IYPPVSRSIMVTKGQRLVLECVASGIPTPQVTWAKDGQDLRFHNNTRFLLSNLLIDSAGE
GDSGTYACHADNGIGSESAATVLYDVLVFEPPQVTVELQQQEVMWGENARFSCQARGKPT
PSVVWLHNARPLATSPRHRLSARVLRVINVGPQDDGLYQCMAENGVGSSQAAARLVTLPT
SNPSRSGKLTSSLCPLSPDKVLREQVPVKPGATGSVLTLDCSELTGQVSVAEAPVILSQP
RTVKADFYDLTWKPRHDGGSAVVEYIVKYRKIEDPPGEWTSSCISGSLHKLTLAKLQPAS
LYEVEMSAKNCAGLGQPAMMTFRTGKGRRGPGGQNEPPKTPAVPSPRLSPPEAPDKPTIS
TATETSAYVTWIPRSNRGFPIQSFRVEFKKLKGKGGGEWEVAVTNIPPQRLSVEITGLEK
GMSYKFRVLAVNVIGASPPSVPSKAYTVLGGGRPNERPVDGPYITYNEAINETTIILKWT
YTAVNNTPVYGFYIFYRPTDSDNDSDYKKDVVEGDRYWHSISDLQPETAYDIKMQSFNEG
GESEFGNVVILETKARLNQRPSPSETSSQRPEHSGGPVPRPSDLPYLIVGVVLGALVFII
VAFIPFCLWRAWAKEKEMSDLCFPAVASPVSSCQYTMVPLQGLALVGHCPLDPHLPPPHA
VYPPIGLYTSNGKHHRPTHCLPGLQEDVQYDMECGTLLAQTMSNGHVPVYHYSNSEPEHH
GDGEDHCFLPEDSTLQLLNTSEQPISSRDLTGNARFYNGDIIKENAINQDPPCSPRSLEE
ENSKATTSAATTPESQDALPLQEVNTLQRETPLVEQGTSD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaacattagactggactccatggatgagaaagcgacgggcacgagtgctgtgt
gctctgagtgcagtgctgctgtgctgcctacagggcggcgccaccatcaatggtgccact
gaggaagtacccgtgttcacagaggagcctctgtcggtggtccagaagctagggggaagt
gtgattctgaggtgcagcacccaacccccctcagccaacatcagctggcggctaaacgga
cgcgagctggttgccggggctgttggggaactgggggtggtactggagcctggcactctg
ctcattcccaccctcactaacctcaccctgggcaggtaccagtgtgtggccagcaccaac
gcaggggccctggccagtgtgcccgccaatgtcaccgctgccaagttgcgtgactttgaa
caagacgaccagcaggacattgaggtggatgaggggaacacagctgtgatcgtatgtcac
ctccctgagagccagcccaaggcacaggtccgctacagtgtcaaacaggagtggctcgag
acctccaaggggaactacctgatcatgccatcagggaacctgcagatagccaacgccact
ctggacgacgaggggccttacaagtgtgctgcttacaaccctgtcacacaggaagtcaag
acctccacctccactgaccgcctgcgcatacgccgttcaacatcagaggcggcccatatc
atctaccccccagtgtctcgctccatcatggtcactaagggacagcgcctggtcctggaa
tgtgtggccagcggcattcccaccccgcaggtcacgtgggccaaggacggccaggacctg
cgtttccataacaacacgcgctttcttctcagcaacctgctgattgactcggcgggcgag
ggcgactcagggacgtatgcgtgtcacgctgacaacggcatcggatcggagagcgccgct
acagtgctgtatgacgtgctggtgttcgagcctccccaggtaaccgtagagctccagcaa
caggaggtgatgtggggggagaacgcacgcttcagctgccaggccaggggtaaacccacc
ccctctgtcgtatggctccacaacgcccgccccctggccacgtcgccacgccaccgcctg
tctgcccgcgtgctgcgtgtcatcaacgtgggcccacaggatgatggcctgtaccagtgc
atggctgagaacggcgtgggcagctcgcaggccgctgccagactggtcaccttgccaacc
agtaacccatcacggtcagggaagctgacgtccagcctgtgtcccctgagcccagacaag
gtgctgcgggagcaggtcccagtgaagcccggggccacggggagcgtgctgaccctggac
tgctctgagctgactgggcaggtctctgtggcagaggcccctgtcatcctcagccagccc
aggaccgtcaaggctgacttctatgatctgacctggaaacctcgccacgatggaggctct
gctgtggtggagtacatcgtcaagtacagaaagattgaggaccctccaggtgagtggacc
agcagctgtatatctgggtctctccacaagctgaccctggccaagctgcagccagccagt
ctgtacgaggtggagatgtctgctaagaactgtgctggcctgggacaaccggccatgatg
accttcaggacaggcaaaggtcgtagaggtccagggggacagaacgagcctcctaaaact
cctgcagtaccatcacctcgcctctctcctcccgaggcccctgataagcccaccatctcc
acggcgacagagacgtctgcgtacgtaacgtggatcccgcgcagtaaccggggtttcccc
atccagtcattccgggtggagtttaagaagctgaaagggaagggagggggggaatgggag
gtggctgtcactaatatccccccccaacgactgtctgtggagatcactggcctggagaaa
ggcatgtcctataagttccgtgtgttggcagtgaatgtcattggcgccagcccccccagt
gtcccctctaaggcctacacggtgttgggtggcggcaggcccaacgaacgccctgtagac
ggaccctacatcacttataatgaagccatcaacgagaccaccatcatcctcaaatggaca
tacactgccgtcaacaacacccccgtctacggtttctacatcttctaccggccgacagac
agtgacaacgacagtgactataagaaggacgtggtggagggggaccgctactggcactcc
atcagtgacctgcagcctgagacggcctacgacatcaagatgcagagcttcaacgagggg
ggagagagcgagtttggcaacgtggttatcttagaaactaaagctcgtttgaaccagcgg
ccctccccgtcggagacgtcgtcccagagaccagagcactccggggggcctgtgccccgc
cccagcgacctcccctacctcatagtgggcgtggtcctgggggccctcgtgttcatcatc
gtagccttcatccccttctgcctgtggagagcctgggccaaagagaaggaaatgtcagac
ctgtgtttcccagctgtggcgtcccccgtctcctcctgccagtacaccatggtgcccctg
cagggcctggcactggtcgggcattgccccctggacccccacttgcccccaccgcacgcc
gtctacccacccattggactgtacacctccaacgggaaacaccatcggcccacacactgc
ctgccaggactacaggaggatgtgcagtatgatatggagtgtggcacgctactagcacag
accatgtcaaacggacacgtcccagtctaccactactctaacagtgagcctgagcatcat
ggggacggagaagatcactgctttctgcccgaagactccacccttcagctactcaacacc
tcagaacagccaatcagcagtcgggacctgacggggaacgcccgtttttacaatggggac
atcataaaggagaatgccatcaatcaagacccaccctgctctcctcgatcactggaggag
gagaactccaaggcgacaacctcagcagctacaacgccagaatcccaagatgcacttcca
ctccaggaagtgaacaccctccagagggaaacaccgctggtagaacaagggacgtcagat
taa
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