Oncorhynchus gorbuscha (pink salmon): 124039618
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Entry
124039618 CDS
T07892
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124039618
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124039618
09142 Cell motility
04820 Cytoskeleton in muscle cells
124039618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
ARA70
Motif
Other DBs
NCBI-GeneID:
124039618
NCBI-ProteinID:
XP_046211733
LinkDB
All DBs
Position
LG07:21227834..21304428
Genome browser
AA seq
3088 aa
AA seq
DB search
MKLFCAIVLLWASSADCQQRGLFPAILNLASNAEITTNATCGETEPEMYCKLVEHVPGRR
IRNSQCRTCNAQSQNPKEQHPITNAIDGTNGWWQSPSIKNGRQFHLVTITLDLRQIFQVA
YIIIKAANSPRPGNWVLERSMDGVEYTPWQYYAISDTECLTRYNITPRFGPPTYKRDDEV
ICTSYYSRLVPLEHGEIHTSLINGRPSADQLTPELLDFTSARYIRLRLQRIRTLNADLMT
LSYRDPKEVDPIVTRRYYYSIKDISVGGMCICYGHAQSCPWDPVAKKLQCVCEHNTCGES
CNECCPGYHQEPWQPGTLSNGNTCEKCNCHNKAEDCYYNQTMDDHKMSMNSHGHFHGGGV
CIDCTQNTAGVNCETCADGFYRPHEVSPYSENPCVECGCDMRGSLTPACIRDDNHAKLEK
GLNPGQCLCKEGFVGERCERCAFGYRDFPLCSRCECSLEGSLNIDPCTECICKENVMGAN
CDLCKQGFYNLEDRNPEGCTECFCFGVSDVCESSPWSLFQTVDSNGWLLPTQSVSIYTAP
LTDDDNNLIVPSITMIQSYRFVSTWAAPEGFLGNRLTSYGGLLNYTVAYDVSVDNVDNSL
PSQFDLIIEGNGRTLRQTPPKQLFLTPLREQLVSVELLPQGFVDLHTGQRVDRDELMTVL
ADLAGLRIRGHLNASAEGALRLSTVSLDMADIRAANPVQARDVEQCECPWGYLGTSCEFC
SSGFYRVGGILFGGNCLQCECNDHATECDINGVCLDCTDNTTGPHCNQCLPGYYGDTTEG
TPEDCQRCACPLIVATNNFSPTCLLEGPGQVTCDQCQQGYTGTKCERCANGYHGDPTVAG
KECVLCECNGNVDPWEPGHCDTSSGVCLKCHSHTSGDDCERCEDGYYGDAITAKNCQACS
CHGNGSYSAMCDLLTGQCTCKPHVVGEKCDECQVGFHSLLSGQGCRDCNCSQSGSVSTAC
EEEGRCQCIPGVAGDKCDRCYHGYFNYQDRGCTQCECAHTHGNCNATTGKCICPPHTIGE
KCELCEEGHWGHDTVAGCKSCDCSEAGSSATQCDLTNGQCLCRPDFARQKCDQCTMGYRG
YPECTACNCNINGTREEFCDKELGLCSCEDTGNCVCKDNVGGGGCDECKKGSFGLSGPNP
DGCSPCFCCSPCFCCSVSLRYSGLSDRIITLGSDPELLHVVSQRDPQGSVEGVYYQASDM
LLDTREKENITLPGPYYWRLPKHYQGNKLLSYGGKLSYMVAFYALDGAGLANYEPQVLMR
GGHLGKKVIYIDMPAPDNRVKTRQNVPLTEHNWKYFNSVSEKAVSHSDFLAVLSNIEYIT
IKASYGTGLQQSRISNITMDTALEAEEGSEGLEVACLIETCECPAGYAGLSCQECSPGYY
RQPVTDLNLRGNRPLIQPCMPCQCNNHSQACDLDTGECLGCQHNTAGEHCNVCGSGYYGN
VKGSVSDCSLCACPLKENSFSPTCAMEGVMGDFRCNACKPGYEGRYCERCSVGYYGNPSG
PGGKCEACQCSTAGSLHLVCDSLKGQCECKAGVRGHLCDQCEARHVLDGDQCVSCDDECT
GVLLDDLDALESSFLSVNLTGVILSPYSTLVSLENDTREVKNLMSWESSPAYHLNRVEED
LTNLTQDIEGLLRQATGLSADGEEVAQSTENRVTQGAKFLEYITTIHTAIQVLAEEAAGL
NRTENLEKDEVNSTRLWEQVAAMLETITLVNLSQANASVSTELSATEALLQRVLEDLLEP
QGAIESQTLNISNTLTEHHQQLEDAHALLMTASENNNLTRTLLGSIYTNLPEYQGLKQNV
SRLNQTAETQLEETQDILADAVNLAEDMSNGTSQLEGAKDQLEQWNPMLRKHVDTLVMEL
RKKDALELVYKAEDHARELSKKAQGLQSSLMEVMNTTLNATSAEHGDSNIRANVQPAEEM
ANLANLTATMALNMIVQPEESFTDLGSEAVQRSEKILAESLTLRNSTEGLLANISDVTDR
MALLKEKLCNTSRLIPEQGALLHSLPNGTSEQVLDAKKQAALANTSLQRALERLEELRVR
LEKSSTAVAQARTSISNTNQLFSDSQSTASTAESKLKEAESRTERLYDRLKPLKTLGENL
SRNLSEIREMINQARKQAASIKVAVLADKNCVRAYTPEVSSSNFNTLTMTVKTSEPDNLL
FYMGSSSSVDFMAVEMQHGKVAYLWDAGSGHAKLEYPDIQINNNKWHHINATRFGRHGTL
SVHQLESEPLPAVKTTSPGSATILEVNKSTLIFVGGLGGQIKSSVVKMTQFKGCMGEASL
NEKNIGLWNYAEREGQCRGCFMSPQTEETSFHFDGSGYSVVEKPLRSTSTSIVMLFKTLS
PNGLLLYLASNGTRDFLSIELVEGQVRLTFELGSGPLTLTSNKAYNTGSWYKITLQRNKR
KVYMAVMAADNSSEKEIMEAESPGTASDLNRSDLDPIYIGGLPMSRPIRRQVVARSYVGC
IKNMEIARSNFDLLRDSYGVKKGCVLEPIRSVSVLREGYVELPSVSLDPQGELLASFSTR
NDTGIILAGFSKAGTRKSRQARQPFLAVMLISGRLEVHVNMAEGGSVHKVVVKSRSGSFS
DGQEHSVILQRNRKMLVVLVDEDHQEMVRLSSEKASLTLTSLYMGGVPPAEGAGLLRTTS
SFYGCIRNLALDSKLLDLSAAVRYHNVDMDSCLLEERPKRVLLPDDTDLDAEPTPDPART
PSPAPGQLSALTPGTLTCASMDNTSSIPEAQQFGISRHSHMVLSINPNTVRRSFSLELSV
RTYTQSGLIYYMAHANQMDYATLQLLGGHLFFTCDKGSGPATATFPVPVNDGQWHTVKTD
FNKKSVVISVDGQPSTPVPAKGNTLDVENKLYLGGLPQTYTAKKIGNVTHSLAGCIQKVL
MNSVKLNTQSPVSEQSTAHCFTAAQDGTFFNGSGYAALIKNGYKVGSDMEVSLEFRSTVS
DGVLLGVSSAKVDAIGLELANGQAVFHVNNGAGRVSATSRLGWWLCDGLWHTLLAKKTKN
ALSLTVDGVTVLTDNPHPQSTSAETKDPVYVGGFPVGVKQNCLTSRMPFRGCMRNIRLIK
GHTTNILDFSTAFTLQGVSPHSCPSTAT
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttctgtgcaattgtgctgctatgggcatcctccgcggactgccagcaaaga
ggtctcttccctgccatcctcaacctggccagtaatgcagagatcaccaccaatgccacc
tgtggagagactgagccagagatgtactgtaagctggtggaacacgtaccaggacgacgc
atccgcaactcccagtgtcgaacctgtaatgcccagagtcaaaaccccaaagagcaacat
ccaatcaccaatgctattgacggcaccaatgggtggtggcagagcccaagcataaaaaat
ggccgccagttccacttggtgaccatcactctggatttacgacagattttccaggtggcc
tacatcatcatcaaggcagccaactcccctcgtcccggtaactgggtgctggagcgttca
atggacggtgtggagtacacaccctggcagtactacgccatcagcgacacagaatgtctg
acccgctacaacatcaccccccgcttcggaccccccacctacaaacgagacgacgaggtc
atctgtacctcctactactcacgtctcgtacccctggagcacggagagatccacacgtct
ttgatcaacgggcggcccagtgctgaccaactgaccccagagctgctagacttcacctca
gcccgctacatccggctgcgcctgcagaggatccgcacgctcaacgccgacctcatgacc
ctcagctaccgtgaccctaaggaggtggaccccatcgtcaccagacggtactactattcc
atcaaggacatctcagtgggcgggatgtgcatctgttacggccacgcccagagctgcccc
tgggaccccgttgccaagaagttgcagtgtgtgtgtgagcacaatacgtgtggggagagc
tgtaatgagtgttgccccggctaccaccaggaaccgtggcaaccgggaaccctctccaac
ggcaacacatgcgagaaatgtaactgccacaacaaggccgaggactgctattacaaccaa
actatggacgaccacaagatgagcatgaactcgcatggacacttccatggcgggggtgtg
tgtatcgattgtacccagaacacggccggtgtcaactgtgagacctgcgcagatggcttc
tacagaccccacgaggtgtcgccctacagtgagaacccatgtgtggagtgtggctgtgac
atgagggggtctttgactcctgcctgcatcagagatgacaaccacgccaagctggagaaa
ggtctgaacccagggcagtgtttgtgtaaagagggctttgtgggtgagcgctgtgaacgc
tgtgcctttggctacagggacttccccctgtgttcacgctgtgagtgcagtctggaaggc
agcctcaacatcgacccctgcacagagtgcatctgcaaggagaacgtgatgggggccaac
tgtgacctgtgtaagcagggtttctacaacctggaggaccgtaaccctgagggatgcaca
gagtgtttctgcttcggtgtgtctgacgtgtgtgagagttcaccctggtctttgtttcag
actgttgactccaatggatggctccttcctacccaaagcgtctccatctacacggcaccc
ctcactgatgacgacaacaacctcattgtccccagcatcaccatgatccagtcgtaccgt
tttgtgtctacctgggccgctccggagggcttcctggggaacaggctgacatcatatgga
gggcttttaaactacactgtggcctatgatgtttctgtggacaatgtggacaattctctg
ccatcacagtttgatttgattattgaggggaatgggagaaccctgcgtcagacgcccccc
aagcagctcttcctgacgcccctgcgggagcagcttgtttccgtggagctcctaccgcag
ggcttcgtagacctacacacaggccagagggttgacagggacgagctcatgaccgtattg
gcggacttggccggactgaggatcagaggccacctcaatgccagcgcagagggggcactc
aggttgagcaccgtatctctggacatggcagacatcagggctgctaacccagtccaggcc
cgggacgtggagcagtgtgagtgcccctggggctacttgggcacatcctgtgagttctgt
tcatctggattctatcgcgtcggcgggatcctgttcggaggtaactgtctccagtgtgag
tgtaacgaccacgctacagaatgtgacatcaacggagtctgtctggactgtacagacaat
accactgggccccactgtaaccaatgccttcccggttactatggcgacaccacagagggc
accccagaggactgccagagatgtgcctgcccgctgatagtggcgacgaacaatttcagc
cccacctgtctcctggagggccctggacaggtgacatgtgaccagtgccagcagggctac
actgggactaagtgtgagaggtgtgctaatggttaccatggcgacccgactgtggcaggc
aaggagtgtgtgctgtgtgagtgtaacggaaacgtggacccctgggagccgggccactgt
gacaccagcagcggtgtgtgtctgaagtgtcacagccacaccagcggagacgactgtgag
aggtgtgaggacggctactatggtgacgccatcactgccaagaactgccaggcttgcagt
tgccatggaaatgggtcatactcggccatgtgtgacctgctcactggacagtgtacctgc
aaaccccacgtagtgggagagaagtgtgacgagtgtcaggtgggcttccacagtcttctc
agtggacaggggtgcagagactgtaactgtagccaatcaggatctgtgtccacagcatgt
gaggaggaggggcggtgccaatgcatcccaggggtggcgggggacaaatgtgaccgatgt
taccatggttacttcaactaccaggacagagggtgtacacagtgtgagtgtgcccacacc
cacggaaactgtaatgcgacgacaggcaagtgtatctgccctccccacaccataggagag
aagtgtgagctgtgtgaggaaggtcactggggtcacgacactgtggcaggttgtaagtca
tgtgattgcagtgaggctggcagttctgccacccagtgtgacctcaccaatgggcagtgc
ctgtgccgtccggattttgccaggcagaaatgtgaccagtgcaccatgggctacaggggc
tacccagaatgcacggcgtgcaactgcaacatcaacggcaccagagaggagttctgtgat
aaggaactgggcctgtgcagctgtgaggacacagggaactgtgtgtgcaaggacaatgtg
ggcggaggaggctgtgatgagtgtaagaagggatccttcggcctatctggtcctaacccg
gacggctgcagcccctgtttctgctgcagcccctgtttctgttgttcagtgagtctcaga
tattctggtctgtcggatagaataatcacactggggtctgacccagagctgctgcatgtg
gtcagtcagcgtgacccccagggcagtgtggaaggggtctactaccaggcctcagacatg
ctgctggacaccagggagaaagaaaacatcacactgcctggaccctactactggaggctt
cccaaacactaccagggaaataagttgttgtcgtatggagggaagctgtcctacatggtg
gcgttctatgctctggacggggctggcctggccaactacgagcctcaggtcctgatgagg
gggggtcatctgggaaagaaggtcatctacatcgatatgcctgcccctgacaacagggtc
aaaacacgtcagaacgtcccactgacggagcacaactggaagtatttcaactctgtgtca
gagaaagctgtgagtcactccgacttcttggcggtcctgagcaatatcgagtacatcacc
atcaaggcctcgtatggtacagggttgcagcagagcagaatctccaatatcaccatggat
acggccctagaggcagaggaggggtcagagggtttggaggtggcatgtctgatagagacc
tgcgagtgtccagctggctacgctggactgtcctgccaggagtgttcccccggctactac
cgccaaccagtgactgatctgaacctgcgggggaacagacccctgatccagccctgcatg
ccctgccagtgtaacaaccacagccaggcctgtgacctggacacgggagaatgtctgggc
tgccagcacaacacagcaggcgagcactgtaatgtgtgcggctctgggtactatgggaac
gtgaaaggctccgtcagtgactgctctctgtgtgcctgccccctcaaagagaacagcttc
agtccaacctgtgcaatggagggagtgatgggagacttccgctgtaacgcctgcaagcct
ggttatgagggacgctactgtgagaggtgttcagtgggttactatgggaacccgtctggt
ccaggagggaagtgtgaggcgtgtcagtgtagtactgcaggttctctccatctggtgtgt
gactctctgaagggccagtgtgaatgtaaggccggtgtcaggggacatttgtgtgaccag
tgcgaggcgagacacgtcctggacggggaccagtgtgtctcgtgtgatgatgagtgtacg
ggggtcctcctggatgacctggatgcattagagagctccttcctgtctgtcaacctgacc
ggggtcatcctgtccccctacagcacactggtcagcctggagaacgacacacgagaggtc
aagaatctgatgtcttgggaaagtagcccagcatatcacctgaacagggtggaggaggac
ttgacaaatctcacccaggacatagaaggactgctacggcaggctacagggctgtctgct
gatggagaggaagtggctcagtccacagagaacagggttacccagggggccaagtttctg
gagtacatcaccaccattcacactgccatacaagtcctggcggaggaagctgccggtctg
aacaggacagagaacttggagaaggacgaggttaacagcacacgtctatgggagcaggtg
gcggccatgttggaaaccatcacattagtcaacctatcccaggccaacgccagcgtctct
acagaactcagtgctaccgaggctctcctccagagggtgctggaggaccttctggagccc
cagggggcgatagagtcccagaccctgaacatctctaacaccctgactgaacatcaccaa
cagctagaggatgcccatgccctactgatgactgccagtgaaaacaacaaccttacacgc
accctgctggggagcatctacaccaacctgccagagtaccagggtctgaagcagaatgtg
agccggctgaaccagacagcagaaacccaactagaggagactcaggacatcctggctgat
gctgtcaatctagcagaagacatgagcaacggcacctctcagctggagggggccaaggac
cagctggagcagtggaaccccatgttgaggaagcatgtggacactctggtgatggagctg
aggaagaaagatgctctggagctggtctacaaggctgaggaccacgcccgggaactcagc
aagaaggcccagggtctgcagagctctctaatggaggtgatgaataccacgctgaacgcc
accagcgcagagcatggcgactctaacatcagagctaacgtccaacctgcagaggagatg
gctaacctagccaacctgaccgctactatggccctcaatatgattgtccagccagaggag
tctttcactgatctgggatctgaggctgtgcagcgtagtgagaagattctggccgagagt
ctaaccctgagaaacagcactgagggtctcctggctaacatcagtgatgtgacagataga
atggccttgctgaaagagaaactctgtaacaccagccgtctcatcccagagcaaggcgcc
ctgctccacagcctgcccaacggcaccagtgagcaggtgctggacgccaagaagcaggct
gccttggccaacacttccctacagagggcgctggagcgcctggaggagctccgggtcaga
ctggagaagtccagcacggctgtggcccaggccagaaccagcatctccaacaccaaccag
ctgttctccgactcacaatccactgccagtacagctgagtctaagctgaaggaggcagag
agtcgtacagagagattgtatgaccgtctcaaaccactcaagaccctgggggagaacctg
agcagaaacctgtctgagatcagagagatgatcaaccaggcccgcaaacaggctgcctct
atcaaggtggcagtgctggcagacaaaaactgtgtgagggcctacacacctgaggtatcg
tccagtaacttcaacactcttaccatgaccgtcaagaccagtgagcctgacaacctgctc
ttctacatgggcagcagctccagcgtggacttcatggcggtggagatgcagcatggcaag
gtggcgtatctgtgggacgcgggttcaggccacgccaagctggagtaccccgacatccag
atcaacaacaacaagtggcaccacatcaacgccacgcgctttgggaggcacggcacactg
tcagtccaccagctggagtcagaacccctgcccgcggtcaagaccacctcaccaggctcc
gctacgatcctggaagtcaacaagtccaccctgatattcgttggtggcctgggaggccag
atcaagtcctctgtggtgaaaatgacccagtttaagggctgtatgggggaggcgtcgctc
aacgagaagaacatcgggctgtggaactacgctgagagggagggccagtgtcgcggctgc
ttcatgagtccgcagacagaggagacgtccttccactttgatggcagtggttactcagtg
gtagagaaacccctccgctccacctccacctccatcgtcatgctgttcaagaccctctcc
cccaacggcctgctgctctacctggcctccaacggcacgagggacttcctgtccattgag
ctggtggagggccaagtgcgtctgacctttgaactgggctctggccctctgaccctcacc
tccaacaaagcctacaacaccggcagctggtacaagatcaccctgcagaggaacaaacgc
aaagtttatatggcggtgatggcggcagacaactcatcagagaaagagatcatggaggcg
gagtctcctgggaccgcctccgacctcaaccgctccgacctggacccaatctacatcggg
ggactgcccatgtctcgccctatcaggagacaagtagtagcacggtcctatgtgggctgc
atcaaaaacatggagattgcccgctccaactttgacctgctccgagactcctatggtgtc
aagaaaggctgtgtgttagagcccatccgcagtgtgtctgtactgagagagggctatgtg
gagttgccgtctgtttctctcgacccccagggggagctgttggcctccttctctacccgc
aatgacactggcataatcctggcaggcttcagcaaggcaggcacccgcaaaagcagacag
gctcgccagcccttcctggcagtcatgctgatttcggggcgcttggaggttcatgtcaac
atggcagagggcgggagcgtccacaaggttgtggtcaaatcacgctctgggagtttcagt
gacggacaggagcactcggtcatcttgcagaggaacaggaagatgctggttgtactagtg
gatgaggaccaccaggagatggtacgtctgtcctcggagaaggcctctctgaccctcacc
tctctgtacatgggcggagtcccaccagcagagggcgccgggctgctccgaaccacctcc
tccttctacggctgcatcaggaacctggccctggattccaagttgttggacctgtcagct
gctgtgaggtaccacaacgtggacatggacagctgtctattggaggagaggcctaaaagg
gtcctcctacctgatgacactgacctagatgccgagcccactccggaccctgccagaacc
ccttcaccagcccccggccagctcagcgcgctcacccccggcacactcacgtgtgcatcg
atggacaacacctcatccatcccagaagcccagcagtttggcatctccagacacagtcac
atggtcctcagcatcaaccccaacacagtgaggaggagtttctctctggagctgtcggtg
cgtacctatacccagagtggtttgatctactacatggcccacgccaaccagatggactac
gccactctgcagctgctgggaggacatctgttcttcacctgtgacaagggcagcggcccc
gccaccgccaccttccctgtgcccgtcaacgacggccagtggcacacagtgaagacggac
ttcaataagaagagtgtggttatcagtgtcgacggccagccgtcaactccagtgccggct
aaaggaaacactctggatgtggagaacaagctgtatctgggaggacttccccagacctac
accgccaagaagataggcaatgtgacccatagtttggcaggctgcatccagaaggtgttg
atgaacagtgttaagttgaacacccagagtccagtgtctgaacaatctactgcgcactgc
ttcaccgcagcccaggacgggaccttcttcaatgggagcggatacgctgctctgataaag
aatgggtacaaagtgggctcagatatggaggtgtctctggagttccgcagcacagtgtca
gatggagtcctccttggggtcagcagtgccaaggtggacgccatcgggctggagctagcc
aacggacaggcggtgttccacgtgaacaacggtgccgggcgggtgtcggccacttcgcgg
ctgggctggtggctgtgtgacggtctctggcacaccctgctggcaaagaagaccaagaac
gctctgagtctgaccgtggacggagtcacggtgctcaccgacaacccccacccccagtcc
acctcggctgagaccaaggacccggtctacgtgggaggcttccctgtcggtgtgaaacag
aactgcctgacatccagaatgccgttccgtggatgtatgcgtaacatccgcttgatcaag
ggtcacacgaccaacatcctggacttcagtactgccttcaccctccaaggagtgtcaccc
cactcctgccccagcaccgccacataa
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integrated database retrieval system