Oncorhynchus gorbuscha (pink salmon): 124039687
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Entry
124039687 CDS
T07892
Name
(RefSeq) probable polyketide synthase 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PP-binding
adh_short
PKS_DH_N
CurL-like_PKS_C
ACP_SdgA_C
adh_short_C2
Thiolase_N
ADH_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
124039687
NCBI-ProteinID:
XP_046211872
LinkDB
All DBs
Position
LG07:complement(25111446..25120770)
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AA seq
2113 aa
AA seq
DB search
MEEEEGAIAVVGIGCSFPGGQGLDNFWKVLLEGKNCALPIPNERFNSTYWYDADNSKPGK
SHTSKAALIDGFNELDLRFFGVTDAEADYMDPQQKLLLHCTYRALENAGMPMEKASGTRT
GVYLGLMNRDYDLTTAQYNPGLTNHWSGTGKAMSIAANRISYTFNLTGPSVAIDSACSSS
LVALHFACQAIKQGDCEMALCGGVSCIIEPQVFVALSKAKMISPEGTSKPFSSRADGYGR
GEGCGIILLKTLKQALKDFDHVWGIISKTAVNQDGRTVSPITKPSMVQQEELLRSIYSQS
DLSTVQYIEAHGTGTPVGDPIEAGSISKVIAKARPPGSETLCIGSVKGNIGHTESAAGVA
GLIKVLLMMKHETIVPSLFYSEDSASIDAKALNIKVPTKAEKWGNAGSVERIAGINNFGF
GGTNAHTIVKQYNNSHTQTARVERSYEYFILSAASEKSLTMMVQDTAEQISGNKTVELQG
LSYTSACRRSHMKHKYRKAFTTSSLVDLRNQLKSALNKKIAPSKLDPKLVYVFCGNGVAY
QGMCKQLLKQEPVFREKIKEVEALFQMYQRMSITERLESASVDDDFSKPDVVQPLLFAIQ
VGIASLFKHWGIKPDAILGHSVGEVAAAHCSGLLSLEDAVKVIYFRSTLQNKVTGGKMLV
VSNMAVSEVLNLLPSYLNKVCLAASNSPQSCTLSGDADAIDSLYQKLSSSVNSKNLFLHV
LDVPAAYHSQMMDPILSQIEDSIGSLQVNHVETELFSTVTGKAVEQPDFSTGKYWARNIR
EPVSFEQAVRSATKDKKNVVFVEIGPRRALQRNIQETLGNETQVLTSVQQNKDHETMLDT
VSKLFELGVQVDWDKFYRGCETSPTPTPRYQFDCVKKDVIFEAAQKGTSGSHPVLTQTGN
DGKTFSCDLTSASVAYLQDHRNNDVAIVPGALYAELGLAAFMASSKSKVPLNMLQLSVSF
QSPFLIAPNSPEMSVKLDHFENETTFKIQSPTATYASGSISCKQGRLAEEQYISLDSVYK
RCTSTMSTDYFYDYLSKRGFQYGSVFRNRGDVHYGADLMEATSVVTVPEELLPQLHDFCI
HPVVLDYLLQLTPITIVNAFMARPGFPAEIGSLTVHEPLQPEMVLYLRAANVAADHFEVS
GCFTDKAGRVLVELKHVIVKYLGSQSNVVEEYFFHNDFSVVSDDYKPINKPKTLVFADQM
GVSEAMQNNLSSQSQYISFTHANDLLSRGFKALLSKFKISDLKSFAEILFVWSNDNVTSH
ETEAILENMVNCCEMFRQIVLELKAMKFPNSIRAITYRSAENTVDRISAGFALSGMTRSC
AAEMSDLSFQLIDISSVSTEDIRALSQVLDSFPCSQYPELVVKDGQILKPYLVHTPTESS
DNSQENVHSLKSEEFILQTANPYSMTSLSAIPCDVEHKNIEENSVEIQLSKICVHSSDYF
PVSVSDMNYGPTMYWNKHTSQDHQLFALDFSGTVTAVGKEVSKLKVGEHVVSCYPTAASS
KIVIPEAACYKTKRLTFLKEAPCVSYFVLAWEVLHRALPKVKQQRMGIISSVPDSSLTKV
LAQTATKSGWNNIVLPQFSDQLQNVNKLDAFVFLPPFDKSQFEKACNVSGVRHIVAVCEN
EWQSSISRNGFRCGNDNVRIQTVQMSSALEKGSIRAEKSHIYRWLKSMHLDKKSLDFETT
IFQRVSSGSIDFLPVEESESYFSSKTLPFVALSKDDSVGTLSNIKLLPKPNQLFQKNSVY
IVTGGLTGLGFETVKFVAQRGGGYIVILSRSSPSTDLQQEISNIESQSGATVVSLQCDVS
ISAQVVNTVIAIKERFPSCPIRGVFHSAVVLHDGLIEKLDKSLYEKVLKPKVNGALNLHH
ATKLCKLDYFVCYSSISAFIGNAAQTNYCAANSFLDTFCQYRRNIGLAGQSISWGALNLG
LLLDKDHFQRFLAAKGMMVMGVAEIHESLEQCLLLNRPQQVVCKFSFKNLMRHVLAHNAS
LNIRLGALVDEGITKEKGEVAGYDQTTVSMSPSEYVKSVLRETLGVENDELNDDSSLTAL
GIDSMLAMTLQNLLFQDRGVNVPLVKLLDPNSTLSTLVAMLKEGANQESELGDELALDLM
EKNEEESYMSTVL
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaagagggagccattgcagtggttggcattggatgcagcttccctggaggt
caggggcttgacaatttctggaaggttcttctggaaggaaagaactgcgcattgccaatc
cctaacgagaggtttaacagtacatactggtatgatgctgacaacagcaaacctggaaag
tctcacaccagtaaagctgctctcatagacggctttaacgaactcgacctgaggtttttt
ggtgtcaccgatgctgaggccgactacatggaccctcagcagaaactcttgctgcactgc
acctatagggcactagagaatgctgggatgccaatggagaaagctagcggaactagaact
ggagtttacctaggactaatgaacagagactacgatctcacaactgcccagtacaatcca
ggcttgactaaccattggagtggcactggtaaagccatgagtattgcagccaaccggata
tcctacaccttcaacctcactggtccatcagttgccatagacagcgcctgctcatcatct
cttgtggctctgcactttgcttgtcaagccataaaacaaggtgactgtgaaatggctctc
tgtggcggtgtcagctgtatcatagagccacaagtctttgtcgctctcagcaaggcaaag
atgatttcccctgaaggcaccagcaaacctttctccagcagagcagatggctatggcaga
ggagagggctgcgggattattctgctgaagacactgaaacaagcattgaaagactttgac
catgtatggggcatcataagcaaaactgcagtaaaccaagatggccgcacagtctctcca
atcaccaagccatccatggtccagcaagaggagcttctccgcagcatctattcacagtct
gacctgtccactgtccagtacatagaggctcatgggactggaactccagtgggggatccc
atagaagcaggcagcatctccaaagtcattgccaaagccagacctccaggttcagaaaca
ctctgcatcggctctgtgaaaggcaacattggacacacagaatctgcagctggagtggca
ggtctaatcaaggtactactaatgatgaagcatgaaaccattgtcccttcactgttctac
tctgaggacagtgccagtatagacgctaaagccttaaacataaaagttcccactaaagca
gaaaagtggggaaatgcaggctcggtcgaacggattgcagggatcaataattttggtttt
ggaggcacaaatgcccacacaattgtcaaacagtacaacaactctcacacccaaacagcc
agggttgaaaggtcttatgagtattttatcctctcagcagcctcagaaaaatcccttacc
atgatggtacaggacacagctgaacagataagtggaaacaaaacagtggaactccagggt
ctgtcatatacatcagcctgtagaagaagccacatgaaacataaatacaggaaggcattc
acaacatcctctctggttgatctgagaaaccagctgaaatctgctttgaacaaaaagatt
gccccctccaaactagatccaaagttagtgtatgttttctgtgggaatggtgtggcctac
caaggcatgtgcaagcagctcctgaaacaggaaccagtgttcagagaaaagatcaaggag
gttgaggcactttttcaaatgtaccaaagaatgtccatcacagagagactggaaagtgca
tcagttgatgacgacttctcaaaaccagatgttgtccagcccctcctctttgccattcag
gttggcattgccagtctcttcaagcactggggcatcaaaccagatgcaattcttggccac
tctgttggagaggttgctgctgcccactgctctggtctgctgtcccttgaggatgcagtg
aaggtgatttacttccgcagtactctgcagaataaagtcacaggagggaaaatgcttgtg
gtcagtaacatggccgtgtcagaggtcttgaacctccttccctcctacttaaataaggtt
tgcctggctgcctccaacagcccacagtcctgcaccctttcaggtgatgctgatgctata
gacagtctgtatcaaaagctaagcagttcagtcaacagtaagaatttgttcctccatgtt
ctggatgtccctgctgcataccacagccagatgatggatcccatcctctctcaaatagag
gacagtattggctctttacaggtgaatcatgttgagacagaattgttctccacagtgaca
ggaaaggcagtagagcagccagactttagcacaggcaaatactgggccaggaacattcga
gagcctgtttcatttgaacaggcagtgagatcagcaaccaaagacaagaagaatgtggtc
tttgtagagataggccctagaagggctctacaaaggaacatccaggagactctgggaaat
gagacacaagtgctcacgtcagtgcagcaaaataaagaccatgagacaatgctggacact
gtgtccaaactgtttgagttgggggttcaggtagattgggacaagttctacagaggttgt
gagacatccccaacacctaccccaaggtatcagttcgattgtgtgaagaaagatgtcatc
tttgaggcagcacagaaaggtacatcgggcagtcatcctgtgttaactcagacaggcaat
gatggaaaaaccttcagttgtgatctgacctcagcctcagtggcttacctgcaggaccat
agaaacaatgatgttgccattgtccctggtgccctctacgctgagttgggtttggctgcc
ttcatggccagttccaaatcaaaggtgccactcaacatgctgcaactcagtgtcagtttt
cagagtccatttctcattgcaccaaattctcctgagatgagtgtcaaactggatcacttt
gaaaacgagacaacgtttaaaatacaatctcctacagcaacgtatgcatcaggcagcata
tcatgcaagcaagggaggttggctgaggaacagtacatctctctagactcagtttacaag
cgatgcacatcaactatgagtactgattacttttatgattacctaagtaagagagggttt
cagtatggttctgttttcagaaacaggggagatgtgcactatggtgcagacttgatggaa
gccacctctgttgttactgtccctgaagaactactgcctcagttgcatgatttctgcatt
caccctgtagtgctagactacttgctacaactgactccaatcacaatagtgaatgcattc
atggcaaggcctggcttccctgcagaaataggcagtttgactgttcacgaacccctgcag
cctgaaatggttctttatttgagagccgcaaatgttgcagccgaccatttcgaagtatct
ggctgtttcaccgacaaagcaggtcgggtcttggttgaactgaagcatgtcatagtcaag
tatcttgggagccaatctaatgttgttgaagagtacttcttccacaatgacttcagtgtt
gtgtctgatgactacaagcccattaataaacccaagacattggttttcgctgaccagatg
ggtgtatctgaagccatgcaaaacaatttgagctcacagtcgcaatacatctctttcaca
catgccaatgatctcttgagccgtggattcaaagcactgttgtcaaaattcaaaatctca
gacttgaaaagctttgcagaaatcttgtttgtgtggagcaatgacaatgttacctcccac
gaaacagaggctatcctggagaacatggtaaactgctgtgagatgttcagacaaatagtc
ctggaactgaaggctatgaaatttccaaattccatcagagcaataacctaccggtcagca
gagaacacagtggaccgcatcagcgcaggctttgccctctcaggcatgactagatcatgt
gctgcagaaatgtcagatctttccttccagctgattgacatcagctcggtctctacagag
gacatcagagctctgtctcaggttcttgattcattcccatgcagccaatacccagaattg
gtggtgaaagatggacagattctaaaaccttacttagtgcacactcccactgaaagcagt
gacaactcacaggaaaatgtccactctttgaagtctgaggagttcatccttcagactgct
aacccatacagcatgactagcttgtctgccattccttgtgatgttgagcataagaacatt
gaggagaattcagttgagattcagctcagtaagatttgtgttcattcttctgactacttt
ccggtcagtgtctctgacatgaactatggcccgacaatgtactggaacaaacacacatct
caggaccaccagcttttcgctctagacttcagtggcactgtcacagctgtagggaaagag
gtgagcaaactgaaagtgggggagcatgtagtttcatgttatccgactgctgcatcttct
aagattgtgattcctgaagcagcgtgctacaagacaaagaggctcacatttctgaaggag
gcaccctgtgtgtcctactttgtacttgcatgggaagtcttgcatcgtgcattacccaaa
gtcaaacaacagaggatgggcatcatctcatccgttcctgactcaagtttgacaaaggtc
ttagcccaaactgcaaccaaatcaggatggaataacattgttctgccacagtttagtgat
cagcttcaaaatgtgaacaagcttgatgcatttgtctttttacctccatttgacaaatct
cagtttgaaaaagcatgcaatgtttccggtgtgagacacattgttgctgtatgtgaaaat
gagtggcaatcctccatctcacgaaatggcttcagatgtggcaatgacaatgttcgcatt
cagactgttcaaatgtctagcgcattggaaaagggatctatcagagcagagaagtctcac
atttaccgttggctcaaatcaatgcatttggacaagaagtctttagatttcgaaaccacc
atctttcagagagtgtcatccggtagcattgacttcctgcctgttgaagagtctgaatca
tacttcagctcaaaaaccctgccttttgtggcactgagtaaagatgattccgtaggcaca
ctgtccaacattaagttgttgcctaaaccaaaccagcttttccagaaaaactctgtatac
attgtcacaggtggtctaactggactagggtttgaaacagtgaagtttgttgcacagcga
ggaggagggtatattgtcattctttccagaagcagtccctcgaccgacttacagcaggag
ataagtaacattgagagtcagtctggcgccacagttgtcagcttgcagtgtgatgtttca
atctctgcacaagtagtgaataccgttattgcgattaaggaacgtttcccctcttgtcca
atcagaggggtcttccacagcgccgtcgtcctgcatgatggcctgattgaaaaacttgac
aaatctctctatgagaaagtcctgaagcccaaagtgaatggagctctgaatctgcatcac
gccacaaaactctgcaagttagattactttgtgtgttactcctccatctctgcctttatt
ggcaatgcagcacaaacaaactattgtgcagccaactccttcttggacacattctgtcag
tacaggcgaaacattggacttgcaggacagtccatcagctggggagctttgaaccttggt
ctcttgctggacaaagaccatttccaaagatttctggcggcaaaggggatgatggtcatg
ggggtagcagaaatccatgagagcctagaacaatgccttctgctgaacagaccacaacaa
gttgtctgcaagttcagtttcaaaaacctgatgcgtcatgttcttgctcataatgcctcc
ctaaacatacgtttaggcgcactggtggatgaggggataacaaaagaaaaaggggaagtt
gcaggatatgaccaaactaccgtgtccatgtcaccaagtgaatacgtcaagtcggtgctc
agggaaacgcttggtgttgagaatgatgagctgaatgacgattcttctctcaccgcatta
ggcatagactcaatgctagccatgactttgcagaatcttctctttcaagacaggggtgta
aatgttcccctggttaaattactggaccccaacagcacactgtctactttggtagcaatg
ctaaaagagggtgcaaaccaggaatctgagcttggtgatgaacttgccttggatctgatg
gaaaagaatgaggaggaaagttacatgtctactgtactttag
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integrated database retrieval system