Oncorhynchus gorbuscha (pink salmon): 124039762
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Entry
124039762 CDS
T07892
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124039762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124039762
03036 Chromosome and associated proteins [BR:
ogo03036
]
124039762
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124039762
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124039762
PBAF complex
124039762
GBAF(ncBAF) complex
124039762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
124039762
NCBI-ProteinID:
XP_046212055
LinkDB
All DBs
Position
LG07:complement(29545756..29593838)
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AA seq
506 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPFGGSPAVRPGL
PAPVMEPSRKRPAPSQQVQQQQNVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAEFYHEPWSQE
AVSRYFYSKIQQRRQELEQALAVRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcagggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccgtctggagcgaggatgccccaccagggt
gctcccatgggcccccccggacccccgttcggtgggagccctgcggtgcggcctggccta
cccgcgccggtcatggagcccagccgcaagagacctgccccctcccagcaggtccagcaa
cagcagaacgtccagaaccgggccagaaagaagccagtgggattccccggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgagctggtcccg
gagtcccaggcttacatggacctgttggcctttgaacgtaaactggaccagaccattatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcctgacgctgacgactcagacggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctcgttcttcaagagcctggtgatcgagctggacaaagacctgtat
ggtcctgacaaccacctggtagagtggcaccgcactcccaccacccaggagacggacggc
ttccaggtgaagaggccaggggacgtgagcgtgcgctgcacactgctgctaatgctagac
taccagcccccccagttcaagctggaccctcgtcttgctcgcctgctgggtatccacacc
cagacccgctcctgtatcatccaggccctgtggcagtacgtcaagaccaacaagctgcag
gactcccacgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgc
ccgcggctcaagttctcggagatcccccagcgtctcaccaacctcctcctgccccctgac
cccatcgtcatcaaccacgtcatcagcgtggaccctaatgaccagaagaagacagcgtgc
tatgacatcgacgtggaggtggaggaccccctgaagagccagatgagcagcttcctgctc
tccactgccaaccagcaggagatcgcctcactggacaacaagatccacgaaaccattgag
tccatcaaccagttaaagatccagagggactttatgctcagcttctccagagaccctaag
ggctacatccaggactggctcaagtcccagagcagagacctgaagctgatgacggacgtg
gtggggaacccggaggaggagaggagggcggagttttaccacgagccctggtctcaggag
gccgtcagtcgttacttctacagtaagatccagcagaggagacaggagttggagcaggcc
ttggctgtgaggaacacctaa
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