Oncorhynchus gorbuscha (pink salmon): 124039773
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Entry
124039773 CDS
T07892
Name
(RefSeq) uncharacterized protein LOC124039773
KO
K19538
retinitis pigmentosa 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124039773
04812 Cytoskeleton proteins [BR:
ogo04812
]
124039773
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124039773
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
124039773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
124039773
NCBI-ProteinID:
XP_046212089
LinkDB
All DBs
Position
LG07:complement(30164253..30180022)
Genome browser
AA seq
2948 aa
AA seq
DB search
MSEVGPRRPPQDQSSGSGHTVTTSRHPYITDPIASKHVCFYKSGDPQFSCLRMAINSRTF
KTFDALLDSLSKKVPLPFGVRNITTPRGVHAVHTLDELEDGKAYICSDQRKVKPINMAAA
SKKLPPWYHARPMSARRRALQLAKQNPGRPMRKRKPVTVRTPKRLMVFRNGDPSVKHNMM
LQKRTTPTFEALLDYVSELMHFPVVKLHTPDGRRVDGLPALILCSGIVVAAGREAFKSGN
YKTQRSSAPTWLPARRMASKRLKQPAPRKMKSVSSSKSHLFSSSSERYFVNQIHHSVAGS
QCDLPSNNTGSVVLEAGHFLESVAETDADTYNGHEEPDNCMPGDDDIEKSFRVNQDGSMT
VEMKVRLTIKEEETIHWTTTLTRSSVASQLSVAESELEIRSPESNALPPTQPNAMGTING
YNAKKDDHDDEDDMSPEASGLTSVEGDDADNSKIHVSEVSLRRAPTPGPRRSRQKQASLE
NINTPSGDEIQENIVGSYSYRETTKNGEVKEEYCMVRQCSSRPVPKPRRVGSMDINNYNK
TQSTFKSGAAEILQIQNGEEEVRESVMQIYEQQTCQDNFLANSQYSVQGVSTYGLMYGRP
ATSETAHFSSSNDFEMELERLSAASESISVRRADQSLSSAFTIPTFKAGGSVLRNGVLNV
HKTSLSKPAKDNETPKLVSEASKDNSTTKAVKKVKKRFSKPKLRKYQVRKSTTPDKRRKE
SSANGPENNKRVKTGGFSRNASIRKIYGPKPARSVMKNKLKGKEIKLNIENPKESSVKEL
NVSENGNETSVSGKKKSLHVSFPTEAQVKATLKRQRSVHEERRIAKECHDLSLPALLSSS
SNINEYVVNWLEKALPTVYPDPVEETQNVETPTMSQVETEGDIIPDVSEINCEMDIEEDE
SCFLKEKTHIPSSPSLVTAAFPNRTFENIATQTNLTMENTTLPCPSTPLHIDTIQERLPT
NPSAENPPLSNGFSVFLPAIISVEKSSPSASPSLEQTSMPIKISVEKLPIPNDLSLENTS
VPNSSIKEKIPVSNCLSPEKTPLPAKTQTEKTPLPAKTQTEKTPLPAKTQTEKTPLPAKT
QTEKTPLPAKTQTEKTPLPAKTQTEKTPLPAKTQTEKTPLPAKTQTEKTPLSNKVSDGSS
VVSSPSYLMCSSPSSLGDEEQPLSSSPSSDEAPSTTGHVFEKTLFNHSTLKEPPSPKLAT
KKTRLLSNLSLEKQLSFRKASAEKSSISSDPTVEKVLVDKAQISNGLSSDKTSHPAKTLI
SNNVLNEASLASSPSCYISTSPTNRTSDERALSISPLSEEDLSPTGHVLEKTTLFNHSTL
RETSSPKLPTKKTRLISNVSLEKQLSLRRLSVDKSSLSSNPTLEKAQLSNPVQITVDKTQ
LPNSHSLEETPPPNESSLPSDSTSENTQLSSSPQPGRTPLPRHISLKTQLRNNFSPERTN
LPTLMTRNKSAPSNLSSEKIPVPSNRTLTNRLSPYSQTLEIVSPPTRLKAKKKPVSRNHS
LEIEPCPVSPTLKRTPLPRKSRQTPLSPKSTPVHLNSSMKKKPTPPSPALVNHEETNGDD
NLSNSDQGDSTKVTAEEPLTKARIPSYREQLPPQPDMKPVLEKLCFSIRSIRQITHNNRP
SCLEKSNSLPDFSSHVASTFGSSSKALLAFLSVITLKESFTNWNIPELNANSVSCAEALK
MIESLREIANIEDAEELKASLSDLQKSTSSQLLQSWKGFQELNDKVRSRSSAPNSSEHDL
LFETHPVEDYNIKEKALDIDELINELDVPEKVKEALAALSTGVSMSMSMSMSMDGNEINI
SKKANEKVESSPEGRVNANSTAVPKEEAEKDNVLNKEATVDVKSIIKTFTNIHHPKEVAE
NTVSPIPESPSSRQEQYISSREHSFKEDYICHRNRQPANKEGAELEQDNWEEEEAKCTYK
QVNHDEEQTSSEIEQAYSLVLHDGYLDKPACSVEAREKDGDIQAGYVEEEESLKKEQEYY
IENPPSHVGQEVTSMELQVSCKESVENDQASSEEEHKCHVEDQISHVESESKCVEEEWMK
EEQQCHIDDQPSYCGMQVSREERESTPEEQASSEEECECHIGQNHEDPEVKCLDLQDSSE
NGKSTPKEDQASSDEEERHDASKPTHEEPEVKCTDVKVSSEENMSSLEEDQASLEEELEC
HTENQPSHEEKGVKCTDVKVSSEENMSSLEEDQASLEEELECHTENQPSHEEKGVKCTDV
KVSSEENMSSLEEDQASLEEELECHTENQPRHEAKGVKCTDVKVSSEENMSSLEEDQASL
EEELECHTENQPSHEEKGVKCIEMQVSREEREYTPEDDRATLDEEEENRADNLPNANAHI
NMKDEQTHLWMKQTTENEIVSTVIEMKPSLVKQHSSDDRMDKDSGKDSEQHVSFEQQSDT
VEEANVEDNRRGTEKKQVCCEEKLPSSEAEHVGVKDEPYTEDESYAEYEESVVEKQPFEE
DTNCETTEAKTINRFEEPLPSVAERVKLLDKKIADVEQRKSITVETTGIRPFAHIKVPAF
SDGDDLTSVSHLSKEQAELVEEASEMQTTNYVVKDVKEQDNAPVHPCKRTTWPINTSETV
VMSPPAPQSSSLAFSYDGCITREPEGNRVKKIKEMFMAKSIVDIQYGQTRLTSPNSSDLS
DNRPGTSDGSHRSLTSTEMSSGEDDSVKKSITKGFVRRTIERLYGKKDANEKVLASESQP
ISVPRPKSREFPGKISLSPFHNARTKVMLDLSYFNATSSFDTYSEPTRCIAFNTQVGPGD
CVPIEENRWLLRECVIRKSVSEPINIYKNTSALTEDECKDAKEDVPYSLFGHTDREDMVK
TVKPFVAKCTYFNLPHGCDSDPYQDDLSSVSKGSDMGDISKDSKDNAEEPKLWAEKNGTL
PDFSPTDFKMPDNKVHPLIEGPGGGKVVVVQPGKGQSGKGQTDVKKIPQEPDALEMLYFS
CGQHCPIL
NT seq
8847 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtgggtccaagaaggcccccccaggaccagtcctcggggagtgggcacaca
gtgaccacgtcacgtcacccctatatcacagaccccatcgcctccaagcacgtctgcttc
tacaagagcggtgaccctcagttcagttgcctgcgcatggccatcaacagccgcaccttc
aagaccttcgatgccctcctggacagcctctccaagaaggtccccctgccgttcggagtg
aggaacatcaccaccccgcggggtgtccatgcggtgcacacactagatgaactggaggat
gggaaggcctacatctgctcagaccagcggaaggtcaaacccatcaacatggcagcagcc
agtaagaagcttccaccctggtaccatgccaggcccatgagcgcccgccgtcgggccttg
caactggccaaacagaaccctggcaggcccatgcgcaaaagaaaacctgtgactgtgcgc
acacctaagaggctaatggtgtttcggaatggggacccaagtgtcaagcacaatatgatg
ctacagaagaggaccactcccacctttgaggcgctgctggattacgtgtccgagttgatg
cactttcctgtggtcaaactacacacaccggatggaagaagggtggatgggctccctgct
ctgattctatgctctggtattgtagtagctgccggtcgggaggcctttaagtctggaaac
tacaagacacagagatcttctgctccaacatggcttcctgccagacgaatggcatctaaa
agactaaaacaaccggcaccccggaaaatgaagtccgtgtccagcagcaaatcacatctt
ttctcctcatcgtcagagagatactttgtgaatcagatacaccactccgttgcaggaagt
cagtgtgacctccccagtaacaacacgggatctgtggtgctggaggctggccattttctg
gagtcagttgccgaaacggacgccgacacctacaacggacatgaagagcccgacaactgt
atgcccggtgatgatgacattgagaagtcctttcgggtgaaccaggatggcagcatgacg
gtggagatgaaggtacgactgaccatcaaggaggaggagaccatccactggaccaccacc
ctgaccaggtccagtgtggccagccagctcagtgtggctgagtctgagctggagatcaga
tctcctgagtccaatgccctaccaccaacacaacccaacgccatgggcaccatcaatggg
tacaatgctaaaaaggatgatcatgatgatgaggatgatatgtctccagaggccagtgga
cttaccagtgtggaaggagatgatgcggataattctaaaatacatgtcagtgaggtctct
ctcaggagggctcctaccccaggacccaggagatccagacagaagcaggcctcattggag
aacatcaacacaccatcaggagatgagattcaggagaacattgtgggatcatactcctac
agagagacaactaagaatggagaggtcaaagaggagtactgcatggtcagacaatgcagc
agcaggccagtccctaaaccaaggagagttggctctatggatatcaacaattacaataag
actcaatccacttttaaatcaggggcggcagagatcttacagatccaaaatggcgaggag
gaagtcagagaaagtgtaatgcagatatacgagcagcagacctgtcaggacaatttcctt
gctaacagccagtacagtgtccagggtgtgtccacgtatggcctgatgtatgggagacca
gccacctcggaaacagcccacttctcctctagtaatgacttcgagatggagctggaaaga
ctctctgcagcctcagagtcaatcagcgtgcggagggctgaccagtctctgtcatctgcc
ttcaccatacccacttttaaggctggaggatctgtcctaagaaacggggtactaaatgtc
cataaaaccagtctctccaagcccgccaaagacaacgagaccccaaagttggtctctgaa
gcaagcaaagacaattccaccactaaagctgtaaagaaagtcaagaaaaggttctcaaag
cccaagttgagaaagtaccaggttcgtaagagtacaacaccagacaaaagacgtaaagag
agtagtgcaaatggtcctgaaaacaataaaagagtgaaaactggggggtttagccgcaat
gcatcgataaggaaaatttatggaccaaaacctgccagaagtgtaatgaaaaataaacta
aaaggaaaggaaatcaaattaaatattgaaaacccaaaggaatcgtcagtgaaagaacta
aatgttagtgaaaatggaaatgaaacgtcagtttcaggaaagaagaaatcattgcacgtt
tcatttcctacggaggcccaggtgaaggcaacactgaaaaggcagaggtccgtgcacgag
gagagaaggattgcgaaagagtgtcatgatttgtcactgcctgcactcctttcgtcctct
tctaatatcaatgaatatgttgtgaactggctagagaaagccctcccaactgtttaccca
gacccagtggaggaaactcaaaatgtggagacaccaacaatgtctcaggtagaaactgag
ggggacattattccagatgtgtcagaaatcaattgtgaaatggacattgaagaagatgag
tcttgttttttgaaagaaaaaacacacataccaagtagtccatctttggtaacagcagca
tttccaaatagaacatttgaaaatatagcaacacagacaaacctgactatggaaaacaca
acattaccatgtccttctaccccattacacattgatactatacaggaaaggttgcccact
aatccctcagctgaaaatccacctctctccaatggtttctctgtctttcttcctgcaata
atctcggtagaaaagtcatcaccctctgccagtccttcgttggaacaaacatcaatgccc
atcaagatctcagtagagaagctaccaatcccaaatgatctgtcattggaaaatacatca
gtaccaaatagctccataaaagagaagatcccagtctcaaactgtctctcgcctgagaag
acaccactgcctgctaaaacacaaacagagaagacaccactgcctgctaaaacacaaaca
gagaagacaccactgcctgctaaaacacaaacagagaagacaccactgcctgctaaaaca
caaacagagaagacaccactgcctgctaaaacacaaacagagaagacaccactgcctgct
aaaacacaaacagagaagacaccactgcctgctaaaacacaaacagagaagacgccactg
cctgctaaaacacaaacagagaagacgccattgtccaacaaagtctcagatgggtcttca
gtagttagcagtccctcatatttaatgtgttcatcacctagtagtttaggtgatgaagaa
caacccttatcaagcagtccttcatcagacgaggctccgtcaacgactggccatgtattt
gaaaagacattgttcaaccactccactctgaaagaaccaccatcgcctaaactcgcaaca
aaaaagacacgattgctcagtaatctctccctggaaaagcaactatcattcaggaaagcc
tcagctgaaaagtcttcaatatccagtgatcctactgtggaaaaggtgttggtggataag
gcacaaatctccaatggtctctcatctgacaagacatcacatcctgctaaaaccttaata
tccaacaatgtcttaaatgaggcttcattagctagtagtccctcatgttacatctcgaca
tcacctactaatcgcacatcagatgaaagagccttatcaatctcccccctatcagaggag
gatctatcacccactggccatgtattggaaaaaacaacattgttcaaccactccactctg
agagaaacatcatcacctaaactcccaacgaagaagacacgattgatcagtaatgtctcc
ctagaaaagcaactatcactcagaagattgtcagtggataagtcttcattgtccagtaat
cctactttggagaaggcacagttatcaaaccctgtccaaatcacagtagacaaaacacaa
ctaccgaacagccactcattggaagagacaccgccaccaaatgagtcttccttacccagt
gactccacttcagaaaatacccaattatctagcagtcctcaaccaggaaggacaccacta
ccaagacatatctctttgaaaacacaattgcgcaacaatttttcacctgaaagaacaaat
ttacccactctgatgacgaggaataagtcagctcccagtaatctctcttcagaaaagata
ccagtacctagtaatcgcacattgacaaatagactgtcaccatattctcagactttggaa
atagtgtcaccacctacgagactcaaggcaaaaaaaaagccagtatctagaaatcactct
ctggaaatcgaaccgtgcccagtaagtcccaccttgaaaaggacacctctaccaaggaaa
agccgccaaacgccattatcgcctaagtcaacgccagtacatctcaattcctccatgaag
aagaaaccaacacctcccagtcccgctttggtgaatcacgaagagacaaatggtgatgat
aacctgagcaattcagatcagggagacagtacaaaagtaacagcagaggagcctctaaca
aaagcacggataccatcatacagagaacaactacctccccagccagacatgaaacctgtg
ctagagaagctctgtttctcaattcggtcaattagacaaatcacacacaacaatcgtcca
tcttgtcttgaaaagtcaaacagcttacctgatttctcctcccatgtggcctctacattt
gggtcatcctccaaagctctcctggcattcttatctgttattaccttaaaggaaagcttc
acgaactggaacatacctgaattgaatgcaaacagtgtaagctgtgctgaggctttgaaa
atgatagagtctctgagagaaattgccaacatagaggatgcagaggagttgaaagctagc
ctgtcagatttgcaaaagtctacttcctcacaactgctgcaaagttggaagggcttccag
gaactcaatgacaaagtcagaagtcgcagctcagcgccgaacagttcagagcatgatctc
ttgtttgagacacacccagtggaggactacaacattaaagaaaaagcactggatatcgat
gagctaataaatgagcttgatgtgccagaaaaggtcaaggaagcattggcagccctttca
acaggggtgagcatgagcatgagcatgagcatgagcatggatggtaatgaaataaacatt
tctaaaaaagctaatgaaaaagtggagtcatccccagagggaagggtaaatgccaattca
accgcagtccctaaggaagaggctgaaaaagataatgtgcttaataaagaggctactgtt
gatgttaaatccatcattaaaacatttacaaatattcaccatcccaaagaggtggctgaa
aatacagtgtcaccaatcccagagagcccaagcagtaggcaagagcagtacatctcctca
agagaacacagctttaaagaggattatatttgccacagaaacagacagccagcaaataag
gaaggtgctgaacttgagcaggacaactgggaagaagaggaggctaaatgtacatacaaa
caggttaaccatgatgaagaacagacatcctcagagatagagcaagcttacagtttagta
ttgcatgatggctatttggacaagccagcctgttctgtggaggctagagagaaggatggg
gacatacaagcaggctatgtggaggaggaagaaagcttgaagaaagagcaagaatactac
attgagaacccaccaagtcatgtggggcaggaggttacatctatggagctgcaggtcagc
tgtaaggaaagcgtagaaaacgaccaggctagctcagaggaagaacataaatgtcatgtt
gaggaccaaattagccacgtggagtcagaaagtaagtgtgtggaggaggaatggatgaag
gaagagcaacaatgtcacatagatgatcagccaagctattgtgggatgcaggttagccgt
gaggaaagagagtccacccctgaggagcaggctagctcagaggaggaatgtgagtgtcac
ataggccaaaaccatgaggacccagaggtcaaatgcttggacctgcaggatagcagtgag
aacggaaagtccacccctaaagaagaccaggctagctcagatgaagaggaacgtcatgat
gcgagcaaaccaacccacgaagagcctgaggttaaatgtacagatgtaaaggttagcagc
gaggaaaacatgtctagtcttgaagaagatcaggctagcttagaggaagagctcgaatgt
cacactgagaaccaaccaagtcacgaggagaaaggggttaaatgtacagatgtaaaggtt
agcagtgaggaaaacatgtctagtcttgaagaagatcaggctagcttagaggaagagctc
gaatgtcacactgagaaccaaccaagtcacgaggagaaaggggttaaatgtacagatgta
aaggttagcagtgaggaaaacatgtctagtcttgaagaagatcaggctagcttagaggaa
gagctcgaatgtcacactgagaaccaaccacgtcacgaggcgaaaggggttaaatgtaca
gatgtaaaggttagcagtgaggaaaacatgtctagtcttgaagaagatcaggctagctta
gaggaagagctcgaatgtcacactgagaaccaaccaagtcacgaggagaaaggggttaaa
tgtatagagatgcaggttagtagagaggaaagagagtatacccctgaagacgaccgggct
accttagacgaggaagaggaaaaccgtgcagacaaccttcccaatgcaaatgcacacatt
aacatgaaggatgagcaaactcacttatggatgaagcagacgactgaaaatgaaatagtg
tctactgtcatagaaatgaagcctagcttggtcaaacagcattctagcgatgacaggatg
gataaggacagcggaaaggatagtgagcagcatgttagctttgaacaacagtctgatact
gtagaagaagccaacgttgaggataatcggcgtggcacagagaagaagcaagtatgctgt
gaagaaaagctgcctagctctgaggcagaacatgttggcgtaaaggatgagccatataca
gaggatgagagttatgcagagtatgaggaaagcgtcgtagagaaacagccgtttgaggag
gatacgaattgcgaaacgactgaggcaaaaacaatcaaccgctttgaggaaccattgcca
tctgtagcagagcgagtaaaactactggataagaagattgctgatgtagagcaaaggaaa
agcattacagtagagacaactggcatcagaccgtttgcccacataaaggttcccgctttc
tcagatggcgatgatttaacaagcgtatcccatctatctaaggaacaagccgagcttgtg
gaggaagcatctgagatgcaaacaaccaattatgttgttaaggatgtcaaagagcaagac
aacgctcctgtgcacccttgtaaaaggacaacgtggcctataaatacatcagaaacggta
gtcatgtcccccccagctccacaatcctcctcgctagcatttagctatgatggctgtata
actagagagcctgagggaaatagggtcaagaagataaaggaaatgtttatggcaaaaagc
attgtggacattcagtatggacaaacaagactaaccagcccaaacagctcagatctgtct
gacaacaggccagggacttctgatggtagtcatcgatcactgacgtcaactgagatgtcc
agtggtgaggatgattctgtgaagaaatccatcacgaaaggctttgtcaggagaactatt
gaaaggctttatgggaagaaagatgcaaatgaaaaagtccttgccagtgaaagtcagcca
atatctgtcccaagaccaaagtccagagaatttcctggtaagatcagcctttccccattc
cataatgcacggaccaaagtaatgttggacttatcatacttcaatgccacaagctctttt
gacacatacagtgagccaacgcggtgtatcgccttcaatacacaggtcgggcctggagac
tgtgtcccgatagaagaaaacaggtggctcctcagagagtgcgtgatcagaaagtctgtc
tcagagcctattaatatttacaagaacacatctgcgttaacggaagatgagtgcaaagat
gcaaaagaagatgttccatactcccttttcggccacaccgatcgggaggacatggtgaag
actgtgaaaccttttgtggcaaagtgcacctatttcaacctgcctcatggctgtgactca
gacccgtaccaggatgacctaagttctgtcagcaagggcagtgacatgggtgacatctcg
aaggacagtaaagacaatgcagaggaacccaagttgtgggctgagaagaatggaaccctg
ccagatttctcccctactgacttcaagatgccagataataaagtgcaccctctgatagaa
ggcccgggaggtggaaaggttgtggtggtccagcctggcaaaggtcagtctggcaaaggt
cagacagatgtcaagaaaattccacaggagccagatgcactagagatgctctacttctcc
tgtgggcagcactgccccatcctttga
DBGET
integrated database retrieval system
