Oncorhynchus gorbuscha (pink salmon): 124039803
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Entry
124039803 CDS
T07892
Symbol
myripb
Name
(RefSeq) rab effector MyRIP isoform X1
KO
K22237
Rab effector MyRIP
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124039803 (myripb)
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124039803 (myripb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab_eff_C
FYVE_2
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
124039803
NCBI-ProteinID:
XP_046212147
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All DBs
Position
LG07:complement(31764308..31982114)
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AA seq
1050 aa
AA seq
DB search
MGRKLDLSGLTDNEAEHVLKVVQRDMKLRKKEEDRLSEMKQELAEEGSRCSVLSKQPRFN
ERCCIRCCSPFTFLVNPKRPCLDCQYNVCKSCRTYSKQEKAWLCAACQKTRILRTQSLEW
YYNNLKSRFKRFGSAKVLKTLYRNHIVERGGNSDLPESSVHDGSNGNDGSVCGSDSTFYR
QSEGHSMAETLTVALRVAEEAIEEAIANAEEFTDSLEKQNEACYLRDHKEELIEELATTI
VQKVRLESGVEFSVTSNIALSLSLLLRSSPFLSQIIQRRKRSEMQTEYDFVWPQSQGQPQ
GSEMSSPSQPPHSTLAQANQAHLKSSYSLWRSRSAFSLTSDDSPEKNTEALVGAGGSGEV
QDYASLKKETARASSLPSWKNVDRLDNSSASSVLQSPDGNWIALQSSQHSRPSLLTKRKS
LVFSVLEKESDVVSAYDEMGPESDQEDDKGGWGAALRQFQRKLSDETYYTDSQHDPEWTY
TPVHLPVTSPSSGQYTNIETLNSDSECSSVPPTRPGKPLQNVMTKTGPNQDPYLHPQQAQ
YHHHQHQHQNPPLYSLHPEALDVNFNPKVTGDSGQSNHVRRSRRRRKSKRELAGNQAHAQ
THTQPLYSSSAQENSFLLNALLKSGMSEEMPGPDVGPVPETSSAVMTPEPKNQDTVAPNS
AAPSSPNCMAPGPLSPSSSGPGSGDTLEQELYSKLGQLVGRASSEEVASSSEDEPIKSPV
KRDRESDRQKEKLRQIERERDPQAQSERQSSKSRDRTKRETFESVNGPELKKRERLRECL
TLRQEERVKERRLERGGKSLEEKVDGRENKTVEKNRQSKKLQRKEVDRETERKGEEVEDR
NEKTGSTPSSPAITPSIQEGVLCDGQKYSAASLCSITTEVLKVLNATEELIGEAGGDSVT
PSECMSASESFLSNLETRKLDQKLTKMEENVYMAAGAVYGLEGSLGDLEKVARGISSGTS
DRDLAFLEDQVATAAAQVQQSELQVSDIEERILSLKTAGLNVTACNRFSNFSKPRPTPQT
LDTSRQQRRKLPAPPVKDKESEQQVTALHP
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagctggacctgtcgggcttgacggacaatgaggcagagcacgtgctgaag
gtggtgcagagggacatgaagctgaggaagaaggaggaggacaggctcagtgagatgaag
caggagctggcggaggaaggcagcagatgctccgtcctctccaagcagccccgcttcaac
gagcgctgctgcatccgctgctgctctcccttcaccttcctggtcaaccccaagcgcccg
tgtctggactgccagtacaacgtctgcaagtcctgccgcacctacagcaagcaggagaaa
gcttggctctgcgccgcctgccagaagaccaggatattgaggacccagtctctggaatgg
tactataacaacttgaagagccgcttcaagaggttcggcagtgccaaggttctgaagacg
ctctacaggaatcacatagtggagagaggaggcaactctgatctaccagaaagcagtgtt
cacgacggaagcaatggcaacgatggcagcgtgtgtggcagtgactccaccttctacagg
cagagtgaaggacacagcatggcagagaccctcactgttgccctgcgtgttgctgaggag
gccatagaggaagccattgccaatgcagaggagtttactgacagcttggagaagcagaat
gaagcttgctacctacgggaccacaaagaggagcttatagaggaacttgccacgaccatc
gtacaaaaagtacgtttagagtctggtgtggagttttcggtcacatctaacattgccctc
tctctctcgctcttgctccgctcctctcctttcctctcccagatcatccagaggaggaag
cgttcagagatgcagacagagtatgactttgtttggccccagagccagggccagccccag
ggcagtgagatgtcctcccccagccagccccctcacagcaccctggcccaggccaaccag
gcccacctcaagagttcctattccctctggaggtcgcgatctgcgttctccctgaccagt
gacgattctccagagaagaacaccgaggcactagtaggggcggggggaagtggagaggta
caggactacgcctctctgaagaaggagaccgccagggcctcctcactgcccagctggaag
aatgtggaccgcctggacaactccagtgcgtcctcggtgctgcagagcccggacggtaac
tggatcgctctgcagagctctcagcactcccgtcccagcctgctgaccaagagaaagtct
ctggtgttcagcgtcctggagaaagagtccgacgtggtctcggcctacgacgagatgggc
cccgaatccgaccaggaggacgacaaggggggctggggggccgcgctgcgccagttccaa
cggaaactctccgacgagacgtactacacggactcccagcacgaccctgagtggacgtac
accccggtccacctcccggtcacatcgccctcttcgggccagtacaccaacatcgagacc
ctcaactctgactcagagtgttcctctgtaccccccacccgaccaggcaaacccctccag
aacgtaatgacgaagacaggccctaaccaggacccgtatcttcatccccagcaagctcag
taccaccatcatcagcatcaacaccagaacccccctttgtactcgctccacccggaggcg
ctggatgtgaactttaaccccaaggtgactggggacagtgggcaaagcaaccacgtcagg
aggtcgcggagacgcaggaagagcaagagggagctggcggggaaccaggcccacgcacag
acacacacacaaccactttattcgtcatctgcacaggagaacagtttcctgctgaacgcc
ctgctgaagagtggcatgagtgaggagatgcctgggcctgacgtggggcccgtgcccgag
acctcctctgcggtcatgacccccgagcccaagaaccaggacactgtggcccctaactct
gcggcccccagctcccctaactgcatggcccctggcccactgtcccccagcagctctggg
cccggctcgggagacacactggagcaggagctctactccaaactgggccagctggttgga
cgagccagcagcgaggaagtagcgagctcgtccgaggatgagccaatcaaaagccccgta
aagagagacagagaaagcgacagacagaaagagaagctgaggcagattgagagagagcga
gatccccaggcacaaagtgagagacagagcagtaaaagtagggataggacgaagcgagag
acgtttgagtcagtgaacgggccggaactgaaaaagagagagcgactaagggaatgtctg
acattgagacaggaggagagagtgaaggagaggaggttggagagaggaggaaagagtttg
gaagagaaagtagatggcagggaaaataagacagtggagaagaacaggcaaagtaagaaa
ctacagagaaaagaggtggacagagagaccgaaagaaagggggaagaagtggaagaccga
aacgaaaagacaggatccacgccctcctcgcctgcaattaccccatctatccaggaaggg
gtgctgtgtgacggacagaagtactcggccgcatcgctgtgcagtatcaccacagaggta
ctgaaggtgctcaacgccacagaggaactgattggtgaggcggggggcgatagtgtcacc
ccctctgagtgcatgagcgcgtctgagtccttcctcagtaacttagagaccaggaagctg
gaccagaaactcaccaagatggaggaaaacgtgtacatggctgcgggggcggtgtacggc
ctggaggggtcactgggggacctggagaaggtggcccgaggcatcagcagtggcacctca
gacagagacctggccttcctggaggaccaggtggccactgctgccgcccaggtgcagcag
tctgagctccaggtatcagacatcgaggagaggatactatccctaaaaacagctggactg
aatgtcaccgcctgcaatcgtttctccaacttctccaagccaagacctacgcctcaaacc
cttgacacatcacgccaacagaggagaaaactacctgcccctccggtcaaagataaggag
tctgagcagcaggtaacagcacttcatccgtag
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integrated database retrieval system