Oncorhynchus gorbuscha (pink salmon): 124039809
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Entry
124039809 CDS
T07892
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124039809 (nphp3)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
124039809 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_11
TPR_19
TPR_6
NACHT
AAA_16
ATPase_2
AAA_22
KAP_NTPase
14-3-3
DUF2225
Uso1_p115_C
AAA_14
AAA_19
ARM_TT21_4th
DUF4635
PIG-L
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
124039809
NCBI-ProteinID:
XP_046212171
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All DBs
Position
LG07:complement(32071092..32094622)
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AA seq
1301 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYTAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIMVYDPDDSDDDDNHTAVTAAGTPCDYWGGGVLGSEPSMGSMMQLQQTFRGPEFAHSLC
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLISTQETQAELDIFTQSYSP
RLRSLCEGLGHFYLNICFPEESAASYALERRQEMERSSVCVLLLKSSITSCVLEDAEEAF
VKNPDGHPLVLYLRTVEAHPLSGPTRQLLERVNAADKAAKVKVVDHGGSPEEGASMIYTQ
LEKVIKQELLGLEGSDVDGKDSGIDEGCEEDSGDVLWDLHDEQEQIEAYQQACSAAAQLG
FQKYIDRLNDMVAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKHSPNTLFLYHFVGRPL
STSSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSSRHQGNIIIIIDSI
DQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLNPREVKSVINTEC
LAADVKLTKDQDKKLERHCRSASTCNALYVTLLAKMITNCRCAWSLERTLEQCLLCQDTM
SLYRLGLKVVLDSLSTDGERHVMREMLCLVCASHNGVSESEVLAVFPDLGLPVLSSLLYT
LQRLCIVGLGCGLIRFQHLQAAEAVRLEFMDGGTCSPAYREKLIHYFSQQLSQDRVTWRV
ADELPWLLQQQEDRAKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFDS
LKHYEKSCASEDSMIRLGNLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPSVA
LSLHQLAGVYVQWRKYGNAEQFYKQALEISENAYGSDHACVARELDSLAMLYQKQNKYEQ
AEKLRKRSVRIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDTADCAKTFNELGVLYYL
QNNLEAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDIR
KRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALDIREKSFGPKHPSVATALVNL
AVLYCHLKKHSEALPLYEQALRVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELYK
RAMEIKEAEPSLVCGKAPSRHSSSGDTFSLRGPAPLPHAPR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcctcctccctggtgagccctggggaggtgatagaggatgcgtatgggggc
gagggtggggaggcctgtgagatacctgtggaggtcaaacctaaagcccgcctcctgcgg
agctcctttcgccgagggcccagggtgattggagccagcttcaaatccacaggctctgtg
gacctggagtacaccgccgaatacgaacggctgcgtaaggagtatgagattttccgggtt
agcaagaacaatgagatcacctccatgcagaagaaggaggccaagctggacgaagagaac
aagaggctgagagctgagctgcaggctctgcagaagacctaccaaaagatcctgagagag
aaggagagtgccctagaggctaagtaccaagccatggagagagccgccacctttgagcac
gacagggacaaagtcaaacggcagttcaagatcttccgggagaccaaagagaaggagatc
caggacctgctgcgagccaagagggacttggaggccaagctacagcagctgcaagctcag
ggcatcatggtgtacgacccggacgactcggatgacgatgacaaccacaccgctgtcaca
gctgcagggactccgtgtgattactggggtggtggagtgctgggcagtgagccctctatg
ggcagcatgatgcaactgcagcagaccttcagaggaccagagtttgcccacagcttgtgc
gatgtggagggcccatttgccaatgtcagcagagatgactgggacgctgctgtggccagt
ctgctgcaggtgtctcctcacgtgtcccaggcattatggagcaacacggtgcgctgctac
ctgatctccacccaggagacacaggctgagctggacatctttacccagagctactctcct
aggctgcggagtctgtgtgaggggctgggccatttctacctgaacatctgtttccctgag
gagagtgcagcctcctatgccctggaacgcagacaggagatggagcggagctctgtgtgt
gtgctccttcttaaatcctccatcactagttgtgtgttggaggatgcggaggaggccttt
gtgaagaacccagacggtcatcccctggtactctacctcaggactgtggaggcccaccct
ctcagcggccccaccaggcaactgctggagcgggtcaacgccgcagacaaggcagccaaa
gtcaaggtagtggaccatggtggctccccagaggaaggagcgtctatgatctatactcag
ctggagaaagtaatcaaacaggaactgctgggtttggagggcagcgacgtggacggtaag
gattcgggtatagacgaggggtgcgaggaggattcgggggacgtgctgtgggacctgcat
gacgagcaggagcagatcgaggcctatcagcaagcctgcagcgccgcagctcaactgggc
ttccagaagtacatagatcgtctgaatgacatggtggcagcccctcctcccacccctcca
ctgctggtatcagggggacccggctctgggaagtctctcctgctgtccaaatggattgag
ctgcagcagaaacactcccccaatacgttgttcctgtaccattttgtggggcgacctctt
tccaccagctctgagcctgtactcattattaaacggctcactgtcaagctgctgcagcat
ttctggtccatctctgggttatctatggacccctccaagatcctcgaggagttccctcgc
tggctagagagactgtcttccagacaccaaggcaacatcatcatcatcatcgactccatt
gaccagatacagcaagcagagaggcacatgaagtggctgattgaccccctgccggtcaac
gtcagagtggtggtgtctgtcaacgtggagacttgtccccaggcctggagactgtggccc
accctccacctggaccccctgaaccccagagaggtgaagagtgtcatcaacacagagtgc
ctggcagctgacgtcaaactcactaaagaccaggataagaaactggagagacactgtcgc
tctgcatccacatgtaacgccctgtatgtcaccctgctagccaagatgatcaccaactgt
aggtgtgcctggtcgttggagaggactctagagcaatgtctgctgtgtcaggacaccatg
tctctgtacagattgggcctcaaggtggtgttagattctctcagcacagacggggagaga
cacgtcatgagagagatgctgtgtctggtgtgtgccagtcacaacggtgtgagtgagtca
gaggtgctggcggtgtttccagacctgggcctgcctgtcctctcctccctcctctacacc
ctacagagactctgtattgtaggcctgggctgtggactcatcaggttccagcacctacag
gccgcggaggccgtccggctggagtttatggatggagggacctgctctcctgcctacaga
gagaagctcatccactacttcagccagcaactcagtcaggaccgggtgacgtggcgggtg
gcagacgagctgccctggctactccagcagcaggaggatagggccaagctgcagctcagc
ctccttaacctctttgtctcccagaacctttacaagaggggccatttctctgagctgctg
gcctactggcagtatgtgggcaaagacaagagctccatggccactgagtactttgactct
ctgaagcactatgagaagagctgtgcgagtgaggacagcatgatcaggctgggcaacctg
tatgagacactgggtcgcttcctcaaagacttgggcctgctcagtcaggcggtagctccc
ttacagaggtcactggagatccgggagacggccctggacccggaccaccccagtgttgcc
ctgtccctacaccagctggccggggtttatgtccagtggaggaagtatggcaatgcagag
cagttctacaagcaggccctggagatcagtgagaacgcctacggctcagaccacgcctgt
gtcgcacgcgaactggactccctggccatgctctaccagaagcagaacaagtatgagcaa
gccgaaaaattgaggaagaggtctgtgaggattcgccaaaagactgcccgccagaaaggc
catatgtatggcttcactctgctgcgtcggcgggccctccagttagaggagctgactctg
ggtaaagacacagcagattgtgccaagaccttcaacgagctgggagtcctctactacctc
cagaacaacctggaggctgccaaagtgttcctgactcgttctctagagatgcgtcagcgt
gtgttggggccggaccaccctgactgtgcccagtccctcaacaacttggcggccctacac
actgagaggagagagtacgagaccgctgaggacatgtacgaaagagccctggacatccgg
aagagagccctgtcccctgaccacccctccctggcctacaccctgaaacacctggcaatg
ctctacaaacgcagggggaagctggagaaggctgttcctctgtatgagctggctctggac
atcagggagaagagttttggacctaaacaccccagtgtggccacagcgttggttaacctg
gctgtactctactgccacctgaagaagcacagtgaagcgctgcccctgtatgaacaggct
ctcagagtgtatgaggacagtctgggacgctcacacccacgtgtcggagagacgctgaag
aacctagctgtactcagctatgaggagggggactttgagaaagccgcagagctctacaag
agagccatggagatcaaagaggcggagccgtctctggtgtgtgggaaggccccgtctcgg
cactcgtccagtggggacacgtttagcctacgagggcccgcccctctcccacatgccccc
aggtga
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