Oncorhynchus gorbuscha (pink salmon): 124039826
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Entry
124039826 CDS
T07892
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124039826 (dync2i1)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Dynein and associated proteins
124039826 (dync2i1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
124039826
NCBI-ProteinID:
XP_046212214
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All DBs
Position
LG07:33762750..33780494
Genome browser
AA seq
1144 aa
AA seq
DB search
MRTCFMKHHHARVVNATESSPRTRIAFSQLGCSSLLFTPDRTQHQEVALATSKKITKEDT
WKSDDLRRHIRGGGHDEESSSSRRRDDERRHRTGESVERRHRDPEREARREREKNRERDG
TRERTKPRDTDKDRHQDRRIDGSRDRMGEKEERDKERSRAQDRVIKGTENVKYRNGDRDS
RDKMHDREEKENRDRERVKARERDTERTRERERDALRKSDRDKEKEKNKESETGERDRER
RSDRDRKRNEERAEGGRDRDREHDREKRERHKEREYLKESERYKDRSQKDKERKERHTDK
DHSGQKEEREYREQHRKEKEERERRHKERAQHDTGESRRHDGDSREVESERVHRERKGSD
REREGKRDKHRERRHREEAIPERDSTERTSAKKSSSSSSDLRVHKDKTEPVKTKEVVMRS
ESAWRSSQKQLSDTEEPVEIAEAPAEDRGYDEAQDYEEDFEKMDYEEDFEDVDDSEGEDE
KQTRSHEEREVREEIISQRREEIEAIQRAMDEENERVGSAQPRLSTEEDDRPKRSRDSET
PQSKVSQPGRFMDFVAAKHREVSKKVASKQKKRSTELLRLIDLDYSITFSLLDLPPVNEY
DMYIKNFGTTNTKQAYVQCNEDNTDRDIQTEEIEMSEKWTQHPAERNVGCGGPKLSHEAS
DESVTRLSIDSQRLATFLRSASQVVAVLLEEDRAEKQSLKKLRTQADTLSFSDGCLQLNT
KLPFLYGRQISLVQFSQVQRQTMLSVHNPSAKPSAVRLDSKTIICIWNIWEPSRPQKILV
YESEVQCCCFSPGKSTLVFAGTSVGSVVLWDLREHASAHYTLRIGENDWTLRHPTFSTDA
VLAASGHMSSVSSVEAVPATVAEGLRPELPLLASDEESSGLSFQLASLDGNGVLNLWVVL
ELPKANDAGSHTDLGLRPGGKVKLLHSSTVLTTSERSLTRDAKKTTPLQTLLLKFLPSDS
NHFFIGTNMGLVNHGTSHGLKAPPKFYRPQVVGFRPVDVASIDFSPFGEPIFLVGCGDGS
VRLHTVLSEQPLMEWTSSTAGQPVVSVQWAQTRPTVFCVLDAASYLHIWDLLEKDFEPVI
TEKIDADRVTAMAVFGDPAKQNTYSGISLATQSGKIEMQYFSKRLTVPESADLEKLQIMM
QEAF
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacttgctttatgaaacatcaccatgctagagtggttaatgccactgaaagctcg
ccaagaacgcgtatcgcgttcagccaattaggttgcagcagtctgttgtttacccctgat
aggactcaacatcaggaagtagcattagccactagcaagaaaataacaaaggaagataca
tggaaatcagatgaccttaggaggcacataaggggtggaggacacgatgaagaatctagc
agcagcaggaggagagatgatgagagaagacataggacgggggagtcagtcgagcgacgc
cacagagacccagagagggaggccagaagggagagagagaagaacagagagagagatggg
acccgagagagaacaaaacccagagatacagacaaggacaggcatcaagacagaaggata
gacggctcgagagacaggatgggcgaaaaggaggagagagacaaagaaaggagcagagcg
caagatagggttattaaaggcacagagaatgtaaagtacaggaatggggacagagacagt
cgggacaaaatgcatgatagagaagaaaaagaaaacagggatagggagagggtaaaggcc
agagaaagggatacggagaggacaagggagagggaaagagatgcgctgaggaagagcgac
agggataaagagaaggagaaaaacaaggagagtgaaacaggggagagggacagggagcga
aggtctgacagagatagaaagagaaatgaggagagggcggagggagggagagacagggat
agagagcatgatcgtgagaagagagagagacataaagagagggagtatttgaaagagagt
gaacgctacaaggacagatcgcagaaagacaaggaaagaaaagaaagacacacagacaaa
gaccattcaggacaaaaggaagaaagagaatacagggagcaacatagaaaagaaaaggag
gagagagaaaggagacacaaagagagagcacaacacgatacaggtgaaagtcggagacat
gacggtgattccagagaagtggagagtgagcgagtgcacagggaacgaaagggatcggac
agagagagggagggaaagagggataaacatagagagaggaggcacagagaagaagcaatt
cctgagagggattccactgaacggaccagcgccaagaaatcatcatcatcatcctcagac
ctcagagttcacaaggataagacagagcctgttaaaactaaggaagtagtgatgcgatct
gagtcagcgtggaggtctagtcagaaacaattaagtgacacagaggagcccgtggaaatc
gcggaggccccggctgaggaccgtggctatgatgaagctcaggactatgaagaggacttt
gagaaaatggattatgaggaggattttgaggatgtggatgacagtgagggagaggatgaa
aagcagacacgcagccatgaagagagagaagtgagggaggaaattatttcacagaggagg
gaggagatcgaggccattcagagagccatggatgaggagaacgagagagtgggctctgcc
cagcccaggctaagcacagaggaggacgacagacccaaaaggtcaagagattctgaaacg
cctcaaagtaaagtttcacagcccgggaggttcatggactttgtcgctgcgaagcatcgt
gaggtcagcaaaaaggttgccagcaaacagaagaaacgcagtacagagctgcttcgcctg
atcgacctggactactccatcaccttctccctcctggatctgccccctgtcaatgagtat
gacatgtacatcaaaaactttggaacaacaaacacaaaacaggcttacgtccagtgcaac
gaggacaatactgatcgcgacattcaaacggaggagatcgagatgagcgagaagtggaca
cagcatcctgcggagaggaacgtaggctgtggaggtcctaaactttcccacgaggcgtct
gatgaatctgtgaccagactgagcatcgattcacagcgcctagcaacatttctgcgctca
gcttcacaggtggttgcggtactgttggaagaggatagggctgagaagcaatcactgaag
aagctgaggactcaagcagacactctctctttcagcgacgggtgtttacagctcaatacc
aagcttccatttctatatggtcgtcagatcagcctggttcaattctcccaggtgcagagg
cagaccatgctgtccgtgcacaacccctcagccaagcccagcgccgtgcggctcgacagc
aagaccatcatctgtatctggaacatctgggagccctcccgcccacagaagattcttgtc
tacgagtccgaggtgcaatgctgctgcttcagccctggtaaatccacgctggtgtttgcg
ggcacgtccgtgggttctgtagtcttgtgggacttgagggagcacgccagtgcccattac
actttaagaataggggagaacgactggactctccgccacccaaccttctccacagatgcc
gtgctggcagcgtcgggccacatgtcctcagtgagctctgtggaggccgtccctgccacc
gtggctgagggcctgaggccagagcttccccttttggcttctgacgaagagtcatcagga
ttgtcattccagttggcttctcttgatggaaatggggttctgaatctatgggtggtactg
gagctccctaaagccaacgacgccggctcgcacacagacctggggctccggcctgggggc
aaagtgaaactgctccacagctccacagtcctcaccaccagcgagaggtctttgacgcga
gacgctaagaaaacaacaccgttacagacactgctgttaaaatttctgccttctgattcc
aaccattttttcattggcacgaatatgggtcttgtgaaccatgggaccagtcacgggtta
aaggctcctccaaagttctacaggcctcaggtggttggattcagacccgttgatgtcgcc
tccatcgacttttctcccttcggagaacccatattcctggtgggctgtggggatggcagt
gtcagactacacacagtgctgagtgagcagcctctgatggagtggaccagcagtacagca
gggcagccggtggtgtcagtacagtgggcccagaccaggccaacagtcttctgtgttctg
gatgctgcctcctaccttcacatatgggacctgctggagaaagactttgagcctgtgatc
actgaaaagattgatgctgacagggtaacagccatggctgtttttggtgaccctgcaaag
cagaacacctattcaggaatatcactggcaacacagtcggggaagatagaaatgcagtat
ttcagcaagagattgacagtgcctgaatctgctgacctggagaaactacagatcatgatg
caggaggccttttga
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