Oncorhynchus gorbuscha (pink salmon): 124039934
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Entry
124039934 CDS
T07892
Name
(RefSeq) cadherin-related family member 1-like isoform X1
KO
K16501
cadherin-related family member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124039934
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Cadherin related
124039934
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GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4064
Motif
Other DBs
NCBI-GeneID:
124039934
NCBI-ProteinID:
XP_046212455
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All DBs
Position
LG07:47221173..47402870
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AA seq
886 aa
AA seq
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MKNVKKLHFSLLLVFVHVCFVETQADYAPFFYDNGPYSSNGNLALFSLTEDTPVGTEIYA
LNGTDPEGQEVRYGLSFEPGAKEYFRVEAKSGNITLVEQLDREILDSIEVLVSITDGRSK
VTEKVTVFVMDANDERPVFKNLPSFLDVPENSESGSSIYKVLAVDRDTGSGGSITFYLQT
NGQSSKFAIDRHSGVLRIKPGEMLDYERSTTHFITVVAKDGGGNYNGKEQVMSSSATLTI
NVIDTQDTPPSFVGTPYFGYVYEVSVPGSEIFTVFAKDGDLGTPKPIHYSLENGTDGVFG
INKTSGVISLLTYPIYLKREIFNMKVKASEVSPEGNLMDYGFTTVVIRVVDLNNHPPTFY
GENGPQNMFEMTMYEHPPEGEIIRGLKITVNDSDQGSNAKFNLRLVGPGRMLRVVPQTVL
NEAQVTILVEDSAAMDYEKFHFLTFKLLAVEMDTPERFSATADIVIHLLDTNDNAPKFSS
VYYIARIPENSPGNSNVVSVTATDPDSGFWGEVKYSIYGSGADLFLINSASGIIYTQPWA
SLDAEVKSKYNFYVKAEDAEGKYSLAEVFVTVLDLNDHPPEFNENFLEKTMIIGALVKIE
AQDDDAEGPNNVIEYSIMKTDPENIFDINADTGEIKLKSYIKSMDIVQNITKQNDCTWSV
VVQAQDRGSPSFSTTTVVKIDITEAIQLRGPWASFFVQSRDKPLHILGMIAGVISLMVVV
TVFISTIMFMRNKKSNRILPHRRIRRRNKPPVTFKFPNSGEKLLIQEPEVMVGVNCSNCN
IASGHPLPPNHNMNVVTGHHWSPNHNVSMVSGRHWLPPPPPNAPALPPLLPGGRPGDRQW
VVPTVLGTVAQIKPKRNRNRPVDSVNAALVSELKMRLDQRRLANCS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtcaagaagttacatttttcactgcttcttgtattcgtgcatgtttgcttt
gttgaaacacaagcagactacgccccatttttctacgataatgggccctacagtagcaac
ggaaacctggcactcttcagtctgacagaggacactcctgtcggcacagagatctatgct
ctcaatggcaccgacccggaaggccaagaggtgaggtatgggttgagctttgaacccggt
gccaaagaatacttcagagtggaggccaagtctggaaacataactctggtggaacaactg
gacagagagattttagattctattgaagttcttgtcagtatcacagatggcagaagtaag
gtcactgaaaaggtcacagtgtttgtcatggatgccaatgatgaacgaccagtgttcaaa
aacctgccctcctttttggatgttccagagaactctgaaagtgggagcagtatctacaaa
gtgctggctgtggatcgggatacaggctctggaggctcgatcaccttctatctacagact
aatggtcaatccagtaagtttgccatagaccgacacagtggtgtgctgaggatcaagccc
ggggagatgctggactatgagaggtcgacaacacacttcatcacagtggtggccaaggat
ggtggtgggaattacaatgggaaagaacaggtgatgtcatcctctgccaccttgacaatc
aatgtgattgacacccaggacacgcccccaagctttgtcgggacaccatatttcggatac
gtttatgaagtgtccgtaccaggttcggaaatattcacagttttcgccaaagatggagac
ctaggaacgcccaaaccaattcattattcccttgagaatggtacagatggtgtttttggc
atcaacaaaacaagtggtgtgatcagtctgctgacttaccctatctatctgaagagggaa
attttcaacatgaaagtcaaggcctctgaggtcagccctgaggggaaccttatggactat
gggttcaccacggtcgttatccgggtggtagacctaaacaaccacccccccaccttctat
ggggagaatggaccgcagaacatgtttgagatgaccatgtacgaacaccctccagaggga
gagatcatccgtggtctgaagatcacggtcaatgattctgatcaggggtccaatgctaaa
ttcaacctcagacttgttggtcctgggcggatgttacgggtggttccccagactgtgctc
aatgaggcccaggtaaccatcttagtggaggactctgctgccatggactatgagaaattc
catttcctcaccttcaagcttcttgccgtggagatggacacaccagaaagattcagcgcc
acggcggacatcgtcatacatctcctcgacaccaacgacaatgctcccaagttctcctcc
gtttactacattgccagaatcccggaaaactctcccggcaactccaatgttgtgtctgtg
accgcaacagatccagattcaggcttttggggagaagtcaagtactcaatctacggctca
ggggctgacttgtttctgattaattcagcatcgggcatcatctacacccagccgtgggcc
agcttggatgcggaggtgaagtccaagtataatttctatgtcaaagctgaggacgcagag
ggcaagtacagcctggccgaggtatttgtgaccgtgctggacctcaacgatcacccgcca
gagtttaatgagaacttcctggagaagaccatgatcataggagcgctggtgaagatagag
gcgcaagatgacgatgcagaggggcccaacaatgtcattgagtactccatcatgaagaca
gacccagaaaacatattcgacatcaacgcagacacgggcgagatcaagctcaagtcctac
atcaagtccatggacatcgtccagaacatcaccaaacagaatgactgtacctggtctgtg
gtggtccaggcccaagacagaggctcgccctccttcagcaccaccacggtggtcaagata
gacatcacagaggcgattcaactcaggggcccttgggcatcctttttcgtgcagagtaga
gacaagcctttgcacatcttaggtatgatcgctggtgtcattagtctcatggttgtggtg
acagtcttcatctccaccatcatgttcatgcgcaacaaaaagtccaacaggatcctgccc
caccgccgcatccggaggcgaaacaaaccacccgtgaccttcaagttcccgaactctgga
gagaaactcctaatacaagaaccagaggtcatggtgggggtcaactgtagcaactgtaac
atagcgagcggacaccctctgcctccaaaccacaacatgaatgtggtgactggacaccat
tggtctccaaaccacaatgtgagcatggtgagtggacgccattggctaccaccaccaccg
cccaatgcccctgcccttcccccactgctccctggggggaggccaggggacagacagtgg
gtggtaccgacagtattgggcacagtagcacagatcaagcctaagaggaacaggaacaga
ccagttgacagtgtgaatgcagcactggtgtctgagctcaaaatgagactggaccagagg
aggttggcaaactgctcttag
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