Oncorhynchus gorbuscha (pink salmon): 124039992
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Entry
124039992 CDS
T07892
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124039992 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124039992 (heatr1)
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124039992 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
MMS19_C
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
124039992
NCBI-ProteinID:
XP_046212601
LinkDB
All DBs
Position
LG07:52167279..52192926
Genome browser
AA seq
2145 aa
AA seq
DB search
MTSLAHQLKRLALPQNDPNLLTRREVVSLLFDPKDASRMDRSTFFALGCTGLEELMGIEP
AFSEFQETLFSQASVGMERSVQSKEVNKKLDAGISLFLTRLSPYFLLKPAQKCIEWLVHR
FHIHLYNVDTLLACALPYHETKVFVRVIQLFKLKDPTNRWNWLEGLQKPGVPLARGTLIT
HCYKDLGFMDFICTLVTKSIKGYSGHSGNCAQLRVIFSFYASTIVPALDAVEKVSDTIIS
KLLPYVQKGLKSSLTDYKAATYMIVCQLAVKVVMEAQLVDILALQISKSLCKEPVLPKEG
LGCLIVLLQNQKEGTVGPKSFGQLCAVTSLVPSLQAMAAVHDISPLLRYLLPHLVHAIVT
TGTDEMETEEPSESTRHENLFESVLQGLPLSGGLDNTVAKMLLEEYLSQSRLSAEGVTSL
NQRLLPLVRLFESKYPGALYMVLEGHVGDLSSAEDKNLFHQFISLSMSSGKYQILGDSDT
SLVLSLKHPLPSVRHMAVEHLMGIVTSGQGGFDQAFLKEALLERMKDDVPEVVAATLKAL
ELYVDHLDPEDTVSCLLSLLQRVDLSNAGNWCPVLKEAVRVLDEPRLLEGNSDLKTCVVW
GLLPFLVVTSALPDSPDLQLATCVAQSTIISQHNLTQGWAHALKAVLEMCSQPDFIGLAN
QHLISTLTKNLSNMDPFSKRNALEKLAGLVAVQRGSLRERAAFLVLSQTLMQGLGDMSET
QHLHTAQSVYSLLEPAILELAQKDMPTQQEGVSLSFSVGLGEYLQRLRAGQSMDTEYAVL
LVSLLRGLISNLKCHDTSFKGETWWNPEKLDTNTCCYLRLLCRLFDVLITGAGQGHMAAS
FKALMKLLFQVHLSDPLELFKFLSLVWGYGSNLGDQLDCKVNAILQTQALYVGRAILSAQ
PGKTLTLLASGSSPVVLSLLACLSSPVREVRRAATATLQTLAQVDSSPFHPIIDGLLKTT
EELTTGPTHLSQALGKLYEEAVTGTGKGKARDKKLLVGLEELLLGVQVANCPAYTAKTIL
RALGEVNGESVLSVLMPVLERLLEQSGPENPTVLKDEALLMQLVLGKYNEQAAPLVVKDQ
DCLELFIKALGTVSKPYPDIPCFQIIALEQITKAFYSALGDEKVQQRLLGVMFDLLVESR
SPVCAQTISSVFKGIAVDGELVANELAPAEKPKVTVSVQQTRRSKMLQRKAQDTPQAVPK
EGAVSWQRVTLILELLQHKKKLKRPQTLVPALFSLLSRCLETSTVERGNLEYTKQLILGC
LLNVCQKLSPDGGPVSKDVLDEDKFNVEVVVQCVRMSDMPQTHHHALLLLGSVAGIFPEK
VLHNIMPIFTFMGANIMRLDDTYSFQVINKTVRTVIPALIKANESGDGESTAHMEAVVTR
IVHVFADALPHVPEHRRLPILSQLMTTLGPARFLWVLLLLMFKQHATQTNVTDKDAALER
DVEFWISVCCEFEVEEQLVSLIKILKYLMALPQDKEDGPVKRPTRGKGAEKEKAEELIFN
MEAHSGKELRHFKFLSVSFMAQLLAAGSFVGMIAACGDIVEDSLQKLQQSLLEEILCYIH
TVARCVEENTDKPTGKFWRALLNKAYDVLDKVNALLPTDTFITVMRGLMGNQLPSVRRKA
MELLNNKLQQKTQWQEEQVTVLLDLKGDLLAIVGRGHGKVMEEEQAINRQTALYSLKLLC
RSFGSDHKEAFVPVLNQAVEIVMSPEEEKNVMGSALLCIAEVASTLKALAIPQLPRLMPA
VLQSLTERKEVLSNEIYMLSAVTALQRVTETLPHFISPYLQDTLLQVARLTRVAEKATAA
PQLAVRLASLRTTVATKVPPRVLLPTLTKCYSKMVNSKQSQLGPLMSILKEHIGHMEKDQ
LTSHQSELTYFFLIALDFRAQHCQGDLEKTKEIEGYVIDCLLAMVMKLSEVSFRPLFFKL
FDWCKTESVAKDRLLTFYRLSDSIADRLKGLFVLFAGHLVKPFSDLLRQTNVTKTDEAFF
DTEDNIEKRCLLLEYILDCLHKICLYDTQRFVSKERADSLMTPLVDQLENTLGGEEVYQT
RVTKHLVPCVGQFCVAVGDDTLWKTLNYQILLKTRHNSSKVRFSALLMLLELASKLRENY
MVLLPETIPFLAELMEDECEEVEHQVQKVIHEMETILGEPLQSYF
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttagcccaccagttgaaacgcctggccttgccacaaaatgaccccaatctg
ctcactcgtcgggaggttgtatccctattgtttgaccctaaagatgcctccagaatggat
agaagcaccttctttgcacttggatgcacagggctcgaggaactcatgggcatcgagcct
gcattcagtgagttccaggagacactcttcagccaagcctcagtgggcatggagcgcagt
gtccagtccaaggaggtcaacaagaaactggatgcaggcatctccctgtttcttacacgc
ctgtccccatactttctactcaagcctgcccagaagtgcattgaatggcttgtacacagg
ttccacatccacctgtataatgtggacacactgcttgcctgtgccttgccctatcacgag
actaaagtgtttgtcagagtcattcagctctttaagttaaaggaccccactaaccgatgg
aattggcttgaggggctacagaaaccaggagttcctttggccagaggaaccctaatcact
cactgttacaaggacttgggcttcatggatttcatctgcaccctggtcacgaagtcaatc
aagggatattcgggacattctggcaactgtgcccagcttcgagtaattttctccttttat
gcctccactattgtaccggctttggatgctgtggagaaagtgtctgacacaatcatatcc
aagctgctgccttatgttcagaagggtttgaagtcctctttgacagactacaaggctgcc
acctacatgatagtgtgccagctggctgtgaaagtggtgatggaggcccagctggtggac
atcctggccctgcagatcagcaagtcactgtgcaaggagcctgtgctgcccaaagagggc
ctgggctgcctcatcgtcctcctgcagaaccagaaggagggcactgtcggcccaaaatcc
tttggccagctgtgtgctgtgacttccttggtcccctccctccaggcaatggctgcagtt
catgacatcagtcccttattacgctacctgctgcctcacctggttcatgcaattgtcacc
accggcactgatgagatggagactgaggagccctcggagagcactcgccatgaaaacctg
tttgagtctgtccttcaaggccttccactgtcgggtggtcttgataacacagtagcaaag
atgctacttgaggaatacctctcccagagtcggctctctgctgagggtgtcacttccctc
aaccagcgcttgctgccattagtccgactgtttgagtcaaagtacccaggtgctctgtac
atggtcctggagggccatgtgggtgacctctctagcgcagaggacaagaacctcttccac
caattcatctccctgtccatgagcagcggcaagtaccagatcctcggggactctgacacc
tccctcgtgttgagcctaaagcatccgctcccctctgtgaggcacatggctgtggaacac
ctgatgggcattgtcacctcaggacaggggggttttgaccaggccttcctgaaggaggct
ctgctggagcgtatgaaggatgacgtcccagaggtggtggctgcaaccttgaaggccctg
gagctctacgttgatcacctggatccagaggacactgtgtcatgtctcctctcactgcta
caacgtgtcgacctctcaaatgctggaaactggtgtccagtgttgaaggaggcagtgagg
gttttggatgaacccagactgcttgaagggaactctgaccttaagacttgtgtcgtctgg
ggtcttttgccctttcttgtggtcacctcggcccttcccgactccccagacctccagctg
gccacctgtgtggcccagtccaccatcatatcccagcacaacctcactcagggctgggcc
catgcgctcaaggccgtgttggagatgtgttctcagccggacttcattgggttggccaac
cagcatctcatctcaacactgaccaagaacctgtctaacatggaccccttctccaaacgc
aatgctctggagaagctggctggactggtagcagtccagcggggcagcctgagggagagg
gcagcgttcttggtgctgagccagaccttaatgcaaggcctgggggacatgagtgagacc
cagcacctccacacagcccagagtgtctactccctgctggagcctgcaatactggaactc
gcccagaaagatatgcctacgcagcaggagggtgtgtctctctccttctctgtggggctg
ggagagtacctgcagaggctcagggcagggcagagcatggatacagagtatgcggtgctg
ctggtgtcactgctcagagggctcatatccaacctgaagtgccatgacacttccttcaaa
ggtgagacatggtggaacccagagaagctggacaccaacacttgctgctacctccggttg
ctgtgtcgcctgtttgacgtcctcatcacaggggcaggccaggggcacatggcagccagc
ttcaaggccctgatgaagctgctctttcaggtccacctgagtgatcccctggagctcttc
aagttcctgagtctggtgtggggttacggcagtaacctaggagaccagctggactgtaag
gtcaatgccattttgcaaacccaggccctctatgtgggcagggccatcctcagcgcccag
ccagggaagaccctcacactgctggcatcaggctcatcaccagttgtgctgtccctgctg
gcctgtctgagctcccctgtccgggaggtgaggagggcagctacagccacccttcagaca
ctagcccaggtggatagctctcccttccaccccatcatagacgggctgctgaagaccacc
gaggagctcaccactggcccaactcacctcagccaggccctggggaagctctatgaggag
gctgtaacagggacagggaaaggcaaggcccgggacaagaagctgctggtggggttggag
gagctgctgctgggtgtccaggtggccaactgccctgcctacactgccaagaccatactg
agggctctgggagaggtcaatggagagtctgtgttgtctgtcctaatgcctgtcctggag
cgcctgctggagcagagcgggccagagaaccccactgtcctaaaggatgaggccctgctc
atgcagctggtcttggggaagtacaacgagcaggcagcccccctcgtggtgaaggaccag
gactgcctggagctcttcatcaaggccctaggcacggtgtctaaaccctaccctgatatc
ccctgctttcagatcatcgccctggaacagatcaccaaggcgttctactcagccctcgga
gatgagaaggtccagcagaggctcctgggggtgatgtttgacttgctggtggagagcagg
agtcctgtctgtgcccagaccatcagcagtgtcttcaaagggattgctgtggacggcgag
ctggtagctaatgagctagccccagcagagaagcccaaagtcactgtgtcagtacagcag
acccgcaggagcaagatgctgcagaggaaggcccaggacactcctcaggcagtaccgaaa
gagggcgctgtgtcctggcagagggtgactctcatcctggagctgctgcagcacaagaag
aagctgaagaggcctcagacgctggtgcccgctctcttcagcctgctctccaggtgtctg
gagacatccaccgtggagcgaggcaacctagagtacaccaagcagcttatcctcggctgc
ctgctcaacgtctgccagaagctctcccctgacggaggacccgtcagcaaagatgtgctg
gatgaggacaagttcaacgtggaggttgtggtgcagtgtgtgaggatgtccgacatgccc
cagacccaccatcatgcactgctccttctaggaagcgtggctggtatcttccctgaaaaa
gtcctgcacaacatcatgcccatcttcaccttcatgggcgcaaacatcatgcgtctggac
gacacctacagctttcaggtcatcaacaagaccgtccggacggtcatccctgccctcatc
aaggccaatgagagtggcgacggcgagtcaaccgcccacatggaggcggtggtgacacgc
atcgtgcacgtgttcgccgacgcactgccccacgtgcctgaacaccgccgtctgcccatc
ctgtcccagctgatgaccaccctggggcccgcccgcttcctctgggtcctactgctgctc
atgttcaagcagcacgctacccagaccaacgtcacagataaggatgctgcgttggagagg
gatgtggagttctggatctcagtgtgctgtgagtttgaggtggaggaacagctcgtctct
ctcataaaaatcctgaagtatctcatggctctgccgcaggacaaagaggacggacctgtg
aagaggccaacacgtggcaagggagccgagaaggagaaggcagaggagctgatcttcaac
atggaggcccacagcggcaaagagctgcgccacttcaagttcctctcggtctccttcatg
gcccaactcttggccgccggcagctttgtgggaatgattgcggcgtgcggtgacatcgtg
gaggattctctgcagaagctacagcaaagtcttctggaggagatcctttgctacatccac
actgtggctcgctgtgtggaggagaacactgacaaacccactggcaagttctggagagct
ctgctcaacaaggcctacgatgtcctggacaaagtgaacgccctgttgcccacggataca
ttcatcacggtgatgcgaggcctaatgggtaaccaactgccgtctgtgaggcggaaggct
atggagctgctcaacaacaagctgcagcagaaaacccagtggcaggaggagcaggtgaca
gtgcttctggacctgaaaggcgacctgctggccattgtgggacgtggtcatggcaaagtc
atggaggaggagcaggccatcaacaggcagacagccctctacagcctcaagctgctgtgc
cgcagttttggctcggatcataaggaggcgtttgtaccggtgctgaaccaggctgtggag
atcgtgatgtcaccggaggaggagaagaacgtgatgggcagtgccctactgtgtatcgcc
gaggtggccagcactctgaaggccctcgccatcccacagctgcccaggctgatgccggcg
gtgctgcagtctctaaccgagagaaaagaggtgttgtctaatgagatctacatgttgagt
gccgtcacagccctgcaacgcgtcactgagaccctgcctcacttcatcagtccctacctg
caggacacactgcttcaggtggctcgactgacgcgggtggcagagaaggccaccgccgcc
ccacagctggccgtgcgactggcctccctcaggaccactgtggccaccaaggtgcccccc
agggtcctgctgcccaccctcaccaagtgctacagcaagatggtgaactccaaacagagc
cagctgggtcccctgatgagcatcttgaaggagcacattggtcacatggagaaggatcag
ctgacctcccaccaatcagagcttacgtacttcttcctaattgcgctggacttccgggcc
caacactgccaaggtgatctggagaagaccaaggagattgaaggctatgtgattgactgt
ctcctcgccatggttatgaagctatctgaagtctccttcaggcccctgttcttcaaactc
tttgattggtgcaagactgagagcgtagccaaggaccgcctgctgaccttctaccgccta
tctgacagcatcgcagacaggctcaaggggctctttgtcctgtttgccggtcacctggtc
aagcccttttctgacctgctccgtcagaccaacgtcacaaagacagatgaagcattcttt
gacacagaggacaacattgagaagcgttgtctgctgctggagtacatactggactgcctc
cataagatctgcctgtacgacacgcagcgcttcgtcagcaaggagagagccgactccctc
atgacccctctggtcgatcagttggagaacaccctgggtggagaggaggtttaccagacc
agagtcaccaagcacctggtgccgtgcgtgggccagttctgcgttgccgtgggtgacgac
actctgtggaagactctcaactaccagatcctgctgaagacgcgacacaactcttccaag
gtgcgtttctctgccctgctgatgctgctggaactggcttctaagctgagggagaactac
atggtcctgctaccagagaccattcccttcctggctgaactcatggaggacgaatgcgag
gaggtggagcatcaagtacagaaggtgatccacgagatggagaccatcttgggagagcct
cttcagagttacttctaa
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integrated database retrieval system
